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CCAP BAC Clones
Chromosome 5
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Map Coordinate
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BAC id
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Placement on genome1
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Placement summary3
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BAC End2
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Insert Sequence2
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STS id2
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5p15.33d |
RP11-94J21 |
chr5 1Mb |      |
AQ281737 SP6,
AQ315935 T7 |
AC009170 | AFMB002XC1 |
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5p15.33a |
RP11-82M24 |
chr5 3Mb |  |
BZ749188 SP6,
BZ749189 T7 | | AFMA217YH1 |
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5p15.32b |
RP11-58A5 |
chr5 4Mb | |
CG734273 SP6,
AQ195759,
CG734274 T7,
BZ749161 T7,
AQ195765 | |
AFM154XG3+,
AFM154XG3,
D5S406 |
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5p15.32b~15.32a |
RP11-35K22 |
chr5 5Mb | |
CG734275 SP6,
AQ047185,
CG734276 T7,
BZ749129 T7,
AQ047187 | | AFMB355WB1 |
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5p15.31b |
RP11-46O23 |
chr5 7Mb | |
BZ749135 SP6,
AQ199749,
BZ749136 T7 | |
AFM347YG9+,
D5S676 |
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5p15.31a |
RP11-72C10 |
chr5 10Mb |   |
CG734282 T7+,
BZ749180 SP6,
CG734281 SP6,
AQ267115 SP6 | |
AFM255XB9+,
AFM255XB9 |
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5p15.2d |
RP11-29N3 |
chr5 11Mb | |
BZ749123 T7,
BZ749122 SP6 | | D5S1987 |
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5p15.2d~15.2c |
RP11-145B1 |
chr5 10Mb | |
AQ373835 SP6,
AQ373841 T7 | | AFM042XA11 |
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5p15.2a |
RP11-5N8 |
chr5 14Mb | |
B69658 T7,
B48185 T7,
AZ517022 SP6 | | AFMA282WA5 |
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5p15.1c |
RP11-261B20 |
chr5 15Mb | |
BZ749111 SP6,
AQ486902 T7,
BZ749112 T7 | | D5S1954 |
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5p15.1a |
RP11-269O14 |
chr5 16Mb | |
BZ749115 SP6,
BZ749116 T7 | | AFMA140VD1 |
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5p15.1a~14.3e |
RP11-88L18 |
chr5 17Mb | |
AZ516846 T7,
AQ281510 T7,
AQ281504 SP6 | | AFM105XG1 |
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5p14.3c |
RP11-61K20 |
chr5 20Mb |    |
AQ194278,
AQ194276 |
AC012095,
AC093303 | |
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5p14.3a~14.3b |
RP11-221D10 |
chr5 22Mb |   | |
AC053491,
AC109455 | |
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5p14.2a |
RP11-116O11 |
chr5 24Mb | |
AQ348841 SP6,
AQ348842 T7 |
AC027469,
AC091885 | |
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5p14.1e |
RP11-524C16 |
chr5 26Mb | | |
AC093294 | |
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5p14.1c |
RP11-46C20 |
chr5 27Mb | |
AQ199902,
AQ199898 |
AC093533 | |
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5p13.3d |
RP11-5N11 |
chr5 31Mb | |
CG734283 SP6,
B49300 SP6,
CG734284 T7,
BZ749167 SP6 |
AC022447 | AFMA238ZA9 |
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5p13.3b |
RP11-94E6 |
chr5 33Mb | |
AQ314396 T7,
AQ314394 SP6 | | D5S2062 |
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5p13.2d |
RP11-85N3 |
chr5 35Mb | |
CG734285 SP6,
BZ749190 SP6,
CG734286 T7,
AQ282986 T7 |
AC068818+,
AC112486 |
AFM063YB6+,
AFM063YB6 |
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5p13.2c~13.2b |
RP11-253B9 |
chr5 37Mb | |
CG734287 SP6,
BZ749107 SP6,
CG734288 T7 | | AFM155XH12 |
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5p13.1b |
RP11-19F12 |
chr5 41Mb | |
B92191 SP6,
B82983 T7 |
AC016271+ |
AFM042XA11+,
AFM207YG5,
AFM276VB1+,
AFM276VB1,
AFM329YB9+,
D5S420 |
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5q11.2c |
RP11-160F8 |
chr5 53Mb | |
AZ516879 SP6,
AQ377832 T7 |
AC034246 |
AFM254WF1+,
AFM254WF1 |
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5q11.2d |
RP11-17H13 |
chr5 54Mb | |
B82700 T7+,
CG734289 SP6,
CG734290 T7,
B88037 T7 | | D5S2076 |
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5q11.2e |
RP11-203O23 |
chr5 55Mb | |
AQ417181 T7+,
AQ417179 SP6 | | AFM311YD1 |
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5q11.2f |
RP11-190C5 |
chr5 57Mb | |
BZ749066 T7,
BZ749065 SP6 | |
AFM095ZB7+,
AFM095ZB7 |
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5q11.2g~11.2h |
RP11-19I19 |
chr5 58Mb | |
AQ003243 T7,
AQ003242 SP6 | | D5S431 |
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5q11.2h |
RP11-59G13 |
chr5 57Mb | |
AQ194841+,
BZ749166 SP6,
CG734291 SP6,
CG734292 T7 | | D5S2028 |
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5q12.1a |
RP11-143O12 |
chr5 55Mb | |
AQ371733 T7,
AQ371730 SP6 |
AC021572 |
AFM274XA5+,
AFM274XA5 |
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5q12.1c |
RP11-174I22 |
chr5 62Mb |  |
BZ749057 T7,
BZ749056 SP6 | |
AFM238XA3+,
D5S427 |
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5q12.3a |
RP11-15P2 |
chr5 66Mb | |
B75410 T7,
B75409 SP6 |
AC063978 |
AFM292VE1+,
D5S647 |
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5q13.1c |
RP11-40N8 |
chr5 67Mb | |
CG734294 T7,
CG734293 SP6,
BZ749131 SP6 | | D5S2046 |
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5q13.3b |
RP11-172K14 |
chr5 74Mb | |
AQ414408 SP6+,
CG734295 SP6,
BZ749053 SP6,
CG734296 T7 | | AFMA348WD1 |
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5q13.3c |
RP11-62D9 |
chr5 76Mb | |
CG734297 SP6,
AQ194008,
CG734298 T7 | | D5S1977 |
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5q14.1a~14.1c |
RP11-1H14 |
chr5 77Mb | |
B63223 T7,
B48373 SP6 |
AC015454 |
AFM290VF5+ |
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5q14.1d |
RP11-1E10 |
chr5 78Mb | |
BZ749083 SP6,
BZ749084 T7 | | AFM324WH1 |
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5q14.1e~14.2a |
RP11-207B2 |
chr5 81Mb | |
BZ749088 T7,
BZ749087 SP6 | |
AFM200WA5+,
D5S620 |
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5q14.2c |
RP11-47N20 |
chr5 81Mb | |
AQ194964,
BZ749138 T7,
BZ749137 SP6 | | D5S2029 |
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5q14.3a |
RP11-275E14 |
chr5 82Mb | |
AQ509086 SP6,
CG734277 SP6,
CG734278 T7,
BZ749118 T7 | | D5S1948 |
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5q14.3d |
RP11-258M21 |
chr5 85Mb | |
AQ483737 T7,
AQ483734 SP6 | |
AFM238XF4+,
AFM238XF4,
D5S428 |
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5q14.3e |
RP11-135F5 |
chr5 85Mb |  |
AQ380704 T7+,
AQ380700 SP6 | | AFM190XC11,
D5S617 |
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5q14.3h |
RP11-88D22 |
chr5 91Mb | |
AZ516161 T7,
AQ286674 T7,
AZ516158 SP6,
AQ286672 SP6 | | |
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5q15d |
RP11-204D12 |
chr5 95Mb | |
BZ749085 SP6,
BZ749086 T7 | |
AFM302YG5+,
AFM302YG5 |
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5q21.1c |
RP11-203J7 |
chr5 102Mb | |
AQ419291 SP6,
AQ419293 T7 | |
AFM184YB6+,
AFM184YB6 |
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5q21.2b |
RP11-115L24 |
chr5 103Mb | |
AQ348042 T7,
AQ348041 SP6 |
AC009815 |
AFM268VB1+,
D5S505 |
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5q21.3d |
RP11-252I13 |
chr5 106Mb | |
AQ481343 T7,
AQ481330 SP6 |
AC024587 | D5S475 |
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5q21.3e |
RP11-120B7 |
chr5 107Mb | |
AQ350986 SP6+,
AQ350988 T7 |
AC133134 | |
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5q21.3e~22.1a |
RP11-231G15 |
chr5 108Mb | | |
AC091917 | |
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5q22.2a~22.2b |
RP11-13O21 |
chr5 111Mb | |
AZ521184 SP6,
B73296 T7 | | D5S1965 |
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5q22.3a |
RP11-58G19 |
chr5 113Mb | |
AQ196074,
BZ749162 SP6,
BZ749163 T7,
AQ196094 | | AFMC031XB5 |
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5q23.1a |
RP11-81C5 |
chr5 115Mb | |
AQ284841 SP6,
AQ320568 T7 | | D5S2055 |
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5q23.1b |
RP11-73N22 |
chr5 116Mb | |
CG734300 T7,
CG734299 SP6,
BZ749181 SP6 | | AFM220YG5 |
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5q23.1d |
RP11-15P5 |
chr5 120Mb | |
B75415 SP6,
B75416 T7 | | D5S657 |
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5q23.1e |
RP11-47L19 |
chr5 121Mb | |
AQ200802,
CG734302 T7,
CG734301 SP6,
AQ200798 | | AFM127XD10,
D5S467 |
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5q23.2a |
RP11-265M23 |
chr5 122Mb | |
AQ489975 T7,
AQ489974 SP6 | | AFM205ZD4,
D5S622 |
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5q23.2c |
RP11-209F21 |
chr5 124Mb | |
BZ749090 T7,
BZ749089 SP6 | | AFMC006XF9 |
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5q23.2f |
RP11-42M12 |
chr5 127Mb | |
AQ116131,
CG734304 T7,
CG734303 SP6,
BZ749132 SP6,
AQ046619 | | D5S649 |
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5q23.3c~23.3d |
RP11-114H7 |
chr5 130Mb | |
AQ383557 T7,
AQ347386 SP6 |
AC113367 | |
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5q23.3d~31.1a |
RP11-772D18 |
chr5 131Mb | |
AQ497351 T7+,
AQ597086 SP6 |
AC023861,
AC118464 | |
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5q31.1c |
RP11-4E3 |
chr5 133Mb | |
BZ749142 SP6,
BZ749143 T7,
B48020 T7 | | AFMB354ZC9 |
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5q31.1e |
RP11-21J3 |
chr5 134Mb | |
BZ749099 SP6,
BZ749100 T7,
B84008 T7 | |
AFM066XF11+,
AFM066XF11 |
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5q31.2c |
RP11-233E5 |
chr5 137Mb | |
BZ749101 SP6,
CG734305 SP6,
CG734306 T7 | |
AFM200YA9+,
AFM200YA9 |
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5q31.3c |
RP11-115I4 |
chr5 139Mb | |
AQ345468 SP6,
AQ345482 T7 | | AFMA102ZF1 |
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5q31.3d~31.3e |
RP11-15J20 |
chr5 140Mb | |
B76502 T7,
B76501 SP6 | | |
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5q31.3e |
RP11-14K13 |
chr5 141Mb | |
B76290 T7,
B76289 SP6 | | AFMB074XG1 |
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5q32d~32e |
RP11-19C10 |
chr5 147Mb | |
BZ749079 T7,
BZ749078 SP6 | | AFMA052TH5 |
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5q33.1a |
RP11-109G16 |
chr5 147Mb | |
BZ749027 SP6,
CG734307 SP6,
CG734308 T7 | |
AFM276WD5+,
AFM276WD5,
AFMA052TH5 |
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5q33.1d |
RP11-128C13 |
chr5 149Mb | |
CG734310 T7,
CG734309 SP6,
BZ749031 SP6 | |
AFM144ZH4+,
AFM144ZH4 |
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5q33.2b |
RP11-86C20 |
chr5 152Mb | |
BZ749192 T7,
BZ749191 SP6 |
AC091991 |
AFM191XD8+,
AFM191XD8 |
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5q33.2c |
RP11-170L13 |
chr5 155Mb | |
AQ412570 SP6,
AQ412573 T7 |
AC114959 | AFM311VF9 |
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5q33.3a |
RP11-31B18 |
chr5 155Mb | |
BZ749126 SP6,
AQ046067,
BZ749127 T7,
AQ046068 | |
AFM210VG3+,
AFM210VG3 |
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5q33.3c |
RP11-82E8 |
chr5 157Mb | |
CG734312 T7,
CG734311 SP6 | | AFMB343XE9 |
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5q34a~34b |
RP11-90N23 |
chr5 159Mb | |
CG734313 T7,
AZ518644 T7,
AQ285212 T7 | | AFM136XD2,
D5S403 |
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5q34c |
RP11-88J19 |
chr5 162Mb | |
BZ749198 T7,
BZ749197 SP6 | | AFM211YC7,
D5S422 |
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5q34f |
RP11-13H20 |
chr5 164Mb | |
B76068 SP6,
B76069 T7 | | AFM214ZA9,
AFMB317YD9 |
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5q35.1a |
RP11-14K9 |
chr5 168Mb | |
B75253 T7,
B75252 SP6 | | AFM112YB6,
D5S400 |
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5q35.1c |
RP11-15F10 |
chr5 169Mb | |
B76408 SP6,
B76409 T7 | |
AFM265VG5+,
AFM265VG5 |
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5q35.1d |
RP11-182E4 |
chr5 170Mb | |
BZ749061 SP6,
BZ749062 T7 | | AFM210VF12 |
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5q35.2a |
RP11-48K2 |
chr5 172Mb | |
CG734279 SP6,
AQ198318,
CG734280 T7,
BZ749139 T7,
AQ198320 | |
AFM350XH1+,
AFM350XH1 |
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5q35.2b |
RP11-125L2 |
chr5 173Mb | |
AQ344954 SP6,
AQ344955 T7 | | AFMC005WG1 |
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5q35.3c |
RP11-2I16 |
chr5 177Mb | |
B63629 T7,
B48559 SP6 | | AFMB307ZA9 |
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5q35.3g |
RP11-252I14 |
chr5 179Mb | |
AZ517447 SP6,
AQ491787 T7 |
AC104115 | |
1 FISH-mapped clone was placed on the sequenced
genome based on BAC-ends, insert sequences and STSs.
2 Sequences that are associated with the clone
and used for clone placement.
* indicates
sequences that disagree with data in 'Placement on genome' column.
+ indicates sequences that didn't align to the
genome or were not used for annotation.
3 Placement summary indicates sequences
used for clone placement.
BAC-end sequence aligned in the plus orientation
 BAC-end sequence aligned in the minus orientation
insert sequence
STS aligned
insert sequence has clone end information.
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