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CCAP BAC Clones
Chromosome 18
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Map Coordinate
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BAC id
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Placement on genome1
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Placement summary3
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BAC End2
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Insert Sequence2
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STS id2
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18p11.32c |
RP11-88C10 |
chr18 0Mb | |
CG734315 T7,
BZ749196 SP6,
CG734314 SP6 | |
14236+,
45002+,
AFM016YC5+,
AFM016YC5+,
AFM178XC3+, AFM178XC3 |
|
18p11.32a~11.32b |
RP11-78H1 |
chr18 2Mb | |
AQ286480 T7,
AQ286478 SP6 | |
AFM299YF1+, AFM299YF1 |
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18p11.32a |
RP11-55N14 |
chr18 2Mb | |
AQ082341,
AQ115890 |
AC015958 | AFMA175YE9 |
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18p11.31e~11.32a |
RP11-106J7 |
chr18 3Mb | |
BZ749026 T7+,
AQ317978 T7,
AQ317975 SP6,
BZ749025 SP6 |
AC015945 | AFM205TD6, D18S63 |
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18p11.31e |
RP11-106O1 |
chr18 3Mb | |
CG734316 SP6,
CG734317 T7 | |
AFM080XD7+, AFM080XD7 |
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18p11.31d |
RP11-113J12 |
chr18 3Mb | |
AQ343331 SP6,
AQ343333 T7 | |
AFM238YD8+, AFM238YD8 |
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18p11.31d~11.31c |
RP11-102E12 |
chr18 4Mb | |
AQ312325 SP6,
AQ312328 T7 | | AFMB329WD5 |
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18p11.31c |
RP11-105C15 |
chr18 5Mb | |
AQ316136 SP6,
AQ316138 T7 | | AFM283XG9 |
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18p11.22c |
RP11-102O20 |
chr18 9Mb | |
AQ313383 T7,
AQ313380 SP6 | |
AFM259VH9+, AFM259VH9 |
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18p11.22b~11.22c |
RP11-67I20 |
chr18 9Mb | |
BZ749177 T7,
AQ239191 T7,
CG734255 T7,
CG734254 SP6 | | AFMA054YG9 |
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18p11.22b |
RP11-24G5 |
chr18 10Mb | |
B84417 SP6,
AQ013368,
B84418 T7 | | AFMA053WD1 |
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18p11.22a |
RP11-7E5 |
chr18 10Mb | |
BZ749185 T7,
BZ749184 SP6 |
AC016067+ | D18S1158 |
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18p11.21e |
RP11-151D11 |
chr18 13Mb | |
AQ378182 SP6,
BZ749045 SP6,
BZ749046 T7 | |
AFM266WA5+, AFM266WA5 |
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18p11.21b |
RP11-16A21 |
chr18 12Mb | |
BZ749051 SP6,
BZ749052 T7 | |
AFM254YD5+, AFM254YD5 |
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18p11.21a |
RP11-96I11 |
chr18 12Mb | |
AQ317713 SP6+,
BZ749202 SP6,
BZ749203 T7 | | AFM214XD2 |
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18q11.2c |
RP11-10G8 |
chr18 17Mb | |
B71705 SP6,
B71706 T7 | | AFMA052YG1 |
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18q11.2d |
RP11-59E12 |
chr18 19Mb | |
BZ749165 T7,
AQ198120,
BZ749164 SP6,
AQ198117 | | AFM164ZC1 |
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18q12.1b |
RP11-111H24 |
chr18 23Mb | |
AQ319809 SP6,
AQ342030 T7 | | AFMA054TD1 |
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18q12.1e |
RP11-19F14 |
chr18 28Mb | |
B82984 T7,
CG734319 T7,
CG734318 SP6,
BZ749080 SP6 | |
AFM238VB6+, AFM238VB6 |
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18q12.1g |
RP11-63N12 |
chr18 30Mb | |
AQ238540 T7,
AQ238539 SP6 | | AFMC006XF1 |
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18q12.2b~12.2c |
RP11-90B5 |
chr18 32Mb | |
AQ283417 SP6,
AZ517972 T7,
AQ283420 T7 | | AFMA099ZD1 |
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18q12.2d |
RP11-104N11 |
chr18 33Mb | |
AQ314013 T7,
AQ314010 SP6 | |
AFM298WF9+, AFM298WF9 |
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18q12.3b |
RP11-265I6 |
chr18 35Mb | |
AQ491099 T7,
AQ491097 SP6 | | AFMA074YD9 |
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18q21.1a~21.1b |
RP11-19L3 |
chr18 42Mb | |
BZ749082 T7,
BZ749081 SP6 | |
AFM256VD5+, AFM256VD5 |
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18q21.1d~21.1e |
RP11-20H17 |
chr18 44Mb | |
B88779 SP6,
B85661 T7 | | AFMB043WG1 |
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18q21.1g |
RP11-43K24 |
chr18 45Mb | |
AQ199571,
BZ749134 T7,
BZ749133 SP6,
AQ199570 | |
AFM046XF6+, AFM292WG1 |
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18q21.2d |
RP11-160B24 |
chr18 51Mb | |
AQ377611 T7,
CG734321 T7,
CG734320 SP6 | |
AFM248YF1+, AFM248YF1 |
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18q21.31a~21.31b |
RP11-153B11 |
chr18 52Mb | |
AQ387999 SP6,
AQ388001 T7 | | AFMA054YG5 |
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18q21.31~21.32 |
RP11-4G8 |
chr18 54Mb | |
B48040 SP6,
CG734256 T7,
BZ749144 T7 | | AFMB317ZC1 |
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18q21.32a |
RP11-12J12 |
chr18 55Mb | |
B75846 SP6,
BZ749032 SP6,
BZ749033 T7 | | AFMA337WC9 |
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18q21.32b~21.32c |
RP11-40D15 |
chr18 56Mb | |
CG734258 T7,
BZ749130 T7,
CG734257 SP6 | | AFMB330ZC5 |
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18q21.32c~21.33a |
RP11-15C15 |
chr18 57Mb | |
BZ749047 SP6,
BZ749048 T7,
B76365 T7 | | AFMA052VA9 |
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18q21.33b |
RP11-75O12 |
chr18 59Mb | |
AQ268212 T7,
AQ268209 SP6 | |
AFM248YB9+, AFM248YB9 |
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18q22.1b~22.1c |
RP11-3K7 |
chr18 61Mb | |
B47942 T7,
B47941 SP6 |
AC010782+ |
AFM324WC9+, AFM324WC9 |
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18q22.1e~22.1f |
RP11-105L16 |
chr18 64Mb | |
AQ319765 SP6,
AQ319768 T7 | | AFM094YE5 |
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18q22.2 |
RP11-49H23 |
chr18 64Mb | |
AQ053059,
BZ749141 T7,
BZ749140 SP6,
AQ060575 | | AFMB326XG9 |
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18q22.3a~22.3b |
RP11-57F7 |
chr18 66Mb | |
AQ115997,
BZ749158 SP6,
BZ749159 T7,
AQ115996 | | AFMB304YB9 |
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18q22.3c~22.3d |
RP11-53N15 |
chr18 70Mb | |
AQ051927+,
BZ749153 T7,
BZ749152 SP6 | |
AFM164XE3+, AFM164XE3 |
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18q23b |
RP11-61A18 |
chr18 72Mb | |
AQ200841,
BZ749171 T7,
BZ749170 SP6,
AQ200845 | | AFMA037ZC9 |
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18q23b~23c |
RP11-4B17 |
chr18 72Mb | |
B48936 T7+,
B48935 SP6 | | AFM029XC9 |
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18q23c |
RP11-130J1 |
chr18 73Mb | |
BZ749038 SP6,
BZ749039 T7 | | AFMB015XF5 |
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18q23c~23d |
RP11-7H17 |
chr18 75Mb | |
B72057 SP6,
AZ520043 T7 | | AFMA131WH5 |
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18q23d |
RP11-87C15 |
chr18 75Mb | |
BZ749195 T7,
BZ749194 SP6 | |
AFM254VD5+, AFM254VD5 |
1 FISH-mapped clone was placed on the sequenced
genome based on BAC-ends, insert sequences and STSs.
2 Sequences that are associated with the clone
and used for clone placement.  
* indicates
sequences that disagree with data in 'Placement on genome' column.  
+ indicates sequences that didn't align to the
genome or were not used for annotation.
3 Placement summary indicates sequences
used for clone placement. BAC-end sequence aligned in the plus orientation BAC-end sequence aligned in the minus orientation insert sequence STS aligned insert sequence has clone end information.
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