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CCAP BAC Clones
Chromosome 4
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Map Coordinate
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BAC id
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Placement on genome1
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Placement summary3
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BAC End2
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Insert Sequence2
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STS id2
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4p16.3c |
RP11-460I19 |
chr4 0Mb |      |
AQ633399 SP6,
AQ633400 T7 |
AC019103 | |
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4p16.3b |
RP11-478A6 |
chr4 2Mb |    |
AQ634157 T7 |
AL359379 | |
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4p16.3a |
RP11-808B21 |
chr4 2Mb | |
CL423116 SP6,
CL423121 T7 |
AC055889,
AC084195 | |
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4p16.2c |
RP11-732L22 |
chr4 4Mb |  |
AQ454147 T7 |
AC041016 | |
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4p16.2b |
RP11-326O23 |
chr4 5Mb | | |
AC096740 | |
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4p16.1c |
RP11-117J13 |
chr4 8Mb |  |
AQ349578 SP6,
AQ349580 T7 |
AC104650 | N59764 |
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4p15.33c |
RP11-1J7 |
chr4 11Mb | |
AQ315830 SP6+,
B47699 T7 |
AC097452 | |
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4p15.32d |
RP11-206O9 |
chr4 16Mb | |
AQ421544 T7,
AQ421543 SP6 |
AC060791 | |
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4p15.31e |
RP11-683L20 |
chr4 18Mb | |
AQ612680 T7+,
AQ465461 SP6 |
AC018967 | |
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4p15.31d |
RP11-10P19 |
chr4 19Mb | |
B73045 T7,
B73044 SP6 |
AC096718 | |
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4p15.2c |
RP11-660M5 |
chr4 24Mb | |
AQ434132 SP6+,
AQ434066 T7 |
AC104662 | |
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4p15.1e |
RP11-261K4 |
chr4 27Mb | |
AQ483548 SP6,
AQ483549 T7 |
AC093791 | |
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4p15.1d |
RP11-478O20 |
chr4 31Mb | |
AQ635073 T7,
AQ635070 SP6 |
AC041018 | |
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4p15.1b |
RP11-484N11 |
chr4 33Mb | |
AQ631325 T7,
AQ631322 SP6 |
AC019216 | |
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4p15.1a |
RP11-24L21 |
chr4 35Mb | |
B86707 T7,
B88765 SP6,
B86706 SP6 |
AC116172 | |
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4p14e |
RP11-9D8 |
chr4 37Mb | |
CL423046 T7,
B71537 T7 |
AC108022 | |
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4p14d |
RP11-472B18 |
chr4 39Mb | |
CL423080 T7,
CL423075 SP6,
AQ630198 SP6 |
AC021148 | |
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4p14a |
RP11-1I10 |
chr4 40Mb | |
B48382 T7,
AQ315627 SP6 |
AC096712 | |
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4p13c |
RP11-166B20 |
chr4 43Mb | |
AQ380940 T7,
AQ419829 SP6 |
AC080132 | |
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4p13b |
RP11-178N2 |
chr4 45Mb | |
AQ414280 T7+ |
AC096737 | |
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4p12b |
RP11-121C2 |
chr4 47Mb | |
AQ343574 T7,
AQ343571 SP6 |
AC013491,
AC107068 | SHGC4-1079 |
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4q12b |
RP11-89B16 |
chr4 54Mb | |
AQ285705 SP6+,
AQ285707 T7 |
AC105384 | |
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4q12e |
RP11-345F18 |
chr4 56Mb | | |
AC110611 | |
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4q12f |
RP11-319E12 |
chr4 57Mb | |
AQ536895 T7,
AQ536894 SP6 |
AC013724 | |
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4q13.1c |
RP11-24I7 |
chr4 62Mb | |
AQ013400,
B84441 T7,
AQ013402,
B89377 SP6 |
AC096723 | |
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4q13.1e |
RP11-21I19 |
chr4 64Mb | |
AQ008855 SP6,
B85949 SP6,
B85950 T7 |
AC079213 | |
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4q13.1f~13.2a |
RP11-19C24 |
chr4 66Mb | |
B85530 T7,
B85529 SP6 |
AC096721 | |
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4q13.2c |
RP11-642E20 |
chr4 68Mb | |
AQ402614 T7,
AQ402910 SP6 |
AC098799 | |
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4q13.3b |
RP11-529K3 |
chr4 70Mb | | |
AC063956 | |
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4q13.3c |
RP11-373J21 |
chr4 73Mb | |
CL423109 SP6,
CL423114 T7 |
AC095056 | |
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4q13.3d |
RP11-88J6 |
chr4 74Mb | |
AQ280966 T7,
AQ280964 SP6 |
AC108029,
AL133124 | |
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4q21.21a |
RP11-5K24 |
chr4 79Mb | |
B49271 T7,
B49270 SP6 |
AC131945,
AL160235 | |
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4q21.21b |
RP11-162K6 |
chr4 81Mb | |
AQ374755 SP6+,
AQ374759 T7 |
AC097711 | |
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4q21.21c |
RP11-110P12 |
chr4 82Mb | |
AQ320997 SP6,
AQ320999 T7 |
AC015949 | |
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4q21.22a |
RP11-429O22 |
chr4 84Mb | | |
AC073840 | |
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4q21.23a |
RP11-678H22 |
chr4 85Mb | |
AQ518358 SP6,
AQ408684 T7 |
AC096766 | |
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4q21.23b |
RP11-23B19 |
chr4 87Mb | |
AQ013716,
AQ013717 |
AC016295 | T75436 |
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4q21.3b |
RP11-397E7 |
chr4 87Mb | | |
AC093827 | |
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4q22.1b |
RP11-115D19 |
chr4 90Mb | |
AQ346324 SP6,
AQ346327 T7 |
AC097478 | |
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4q22.1c |
RP11-484F3 |
chr4 93Mb | |
AQ631162 T7 |
AC093847 | |
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4q22.3b |
RP11-369I16 |
chr4 98Mb | |
AQ529700 SP6,
AQ529703 T7 |
AC018884 | |
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4q23b |
RP11-414I7 |
chr4 100Mb | |
AQ552934 SP6,
AQ552938 T7 |
AC108061 | |
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4q23c~24a |
RP11-110C16 |
chr4 103Mb | |
AQ350114 SP6,
AQ323531 T7 |
AC023853 | SHGC-20211 |
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4q24c |
RP11-26E14 |
chr4 104Mb | |
AQ003337 SP6,
B86840 SP6,
AQ003339 T7 |
AC109346 | |
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4q24e |
RP11-752J12 |
chr4 107Mb | |
CL423178 T7,
CL423172 SP6,
AQ499487 SP6 |
AC069206 | |
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4q25a |
RP11-66J6 |
chr4 109Mb | |
AQ238235 T7,
AQ238232 SP6 |
AC026988 | |
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4q25b |
RP11-144H4 |
chr4 110Mb | |
AQ371617 SP6,
AQ371620 T7 |
AC027472 | |
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4q25c |
RP11-380D23 |
chr4 111Mb | | |
AC017068 | RH17615 |
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4q25f |
RP11-73K9 |
chr4 113Mb | |
AQ268132 SP6,
AQ268133 T7 |
AC069028,
AC109347 | |
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4q26a |
RP11-362M19 |
chr4 115Mb | | |
AC093815 | |
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4q26d |
RP11-778G8 |
chr4 118Mb | |
AQ756250 T7 |
AC024353 | |
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4q26f~27a |
RP11-21I10 |
chr4 120Mb | |
B85936 T7,
B83122 SP6 |
AC107048 | |
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4q27b |
RP11-647P12 |
chr4 122Mb | |
AQ440296 T7 |
AC105254 | |
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4q28.1a |
RP11-636M7 |
chr4 124Mb | |
AQ433553 SP6,
AQ402414 T7 |
AC109357 | |
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4q28.1b |
RP11-728C8 |
chr4 125Mb | |
AQ450937 T7,
AQ513846 SP6 |
AC108075 | |
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4q28.1c |
RP11-15O17 |
chr4 126Mb | |
B83579 T7 |
AC079835 | SHGC4-177 |
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4q28.1d |
RP11-77P11 |
chr4 127Mb | |
AQ284562 SP6,
AQ284563 T7 |
AC079067,
AC114742 | |
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4q28.2b |
RP11-184M15 |
chr4 129Mb | |
AQ420457 T7,
AQ420454 SP6 |
AC078850 | |
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4q28.2c~28.3a |
RP11-72C15 |
chr4 131Mb | |
AQ266983 T7,
AQ285025 SP6 |
AC096731 | |
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4q28.3b |
RP11-149A7 |
chr4 133Mb | |
AQ376424 T7 |
AC098858 | SHGC4-178 |
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4q28.3c |
RP11-45L5 |
chr4 135Mb | |
AQ195593,
AQ195597 |
AC015631 | |
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4q28.3g |
RP11-60A1 |
chr4 137Mb | |
AQ200822,
AQ200092 |
AC006572 | |
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4q28.3i~31.1a |
RP11-733C7 |
chr4 139Mb | |
AQ456692 T7+ |
AC093903 | |
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4q31.21b |
RP11-5K16 |
chr4 141Mb | |
B49262 T7,
B49261 SP6 |
AC108019 | SHGC4-749 |
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4q31.21c |
RP11-739G21 |
chr4 143Mb | |
AQ494833 T7+,
AQ462441 SP6 |
AC108077 | |
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4q31.23a |
RP11-56F3 |
chr4 148Mb | |
AQ115821,
CL423314 T7,
CL423313 SP6,
AQ081466 |
AC083898 | |
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4q31.23c |
RP11-24I21 |
chr4 150Mb | |
AQ013411,
B86667 T7,
AQ013418,
AQ003296 SP6 |
AC097465 | |
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4q31.3a |
RP11-2J13 |
chr4 152Mb | |
B63640 T7,
B48573 T7,
B63639 SP6 |
AC097455 | |
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4q31.3b |
RP11-73G16 |
chr4 153Mb | |
AQ268920 SP6,
AQ285968 T7 |
AC097375 | SHGC4-597 |
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4q32.1c |
RP11-17C4 |
chr4 158Mb | |
B81784 T7,
B81783 SP6 |
AC105312 | |
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4q32.1d |
RP11-114P18 |
chr4 160Mb | |
AQ343226 T7,
AQ343220 SP6 |
AC021101 | |
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4q32.3a |
RP11-808H17 |
chr4 165Mb | | |
AC079240 | |
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4q32.3d |
RP11-70M19 |
chr4 168Mb | |
AQ239270 T7,
AQ239267 SP6 |
AC079086,
AC107210 | |
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4q32.3e |
RP11-36G9 |
chr4 170Mb | |
AQ045340,
AQ045338 |
AC079332,
AC104783 | |
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4q34.1a |
RP11-119J20 |
chr4 173Mb | |
AQ341769 SP6,
AQ341770 T7 |
AC024706 | AFM070YA9,
SHGC-1067 |
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4q34.1d |
RP11-134F18 |
chr4 175Mb | |
AQ389039 T7,
AQ389038 SP6 |
AC131948 | |
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4q34.3b |
RP11-313E19 |
chr4 177Mb | |
AQ505339 T7,
AQ505337 SP6 |
AC021871+,
AC093801 | |
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4q35.1b~35.1c |
RP11-451F20 |
chr4 184Mb | |
AQ586125 T7,
AQ586123 SP6 |
AC093844 | |
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4q35.1f~35.2a |
RP11-173M11 |
chr4 187Mb | |
CL423152 T7+ |
AC110771 | SHGC-9749,
SHGC4-1037 |
1 FISH-mapped clone was placed on the sequenced
genome based on BAC-ends, insert sequences and STSs.
2 Sequences that are associated with the clone
and used for clone placement.
* indicates
sequences that disagree with data in 'Placement on genome' column.
+ indicates sequences that didn't align to the
genome or were not used for annotation.
3 Placement summary indicates sequences
used for clone placement.
BAC-end sequence aligned in the plus orientation
 BAC-end sequence aligned in the minus orientation
insert sequence
 STS aligned
insert sequence has clone end information.
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