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Human Genome News Archive Edition

Vol.9, No.3   July 1998

In this issue... 

1997 Santa Fe Highlights 
Patrinos Address 
Joint Genome Institute (JGI) Comes of Age 
JGI Sequencing 
JGI Informatics 
JGI and Bermuda Quality Sequence 
Grants Awarded for JGI Collaboration 
JGI Sequencing Clones 
Sequencing Strategies,Tools 
Gene-Discovery Resources 
Sequencing at NIH NHGRI 
Functional Genomics 
Data Surge Challenges Informaticists 
Genome Annotation: Informatics Advances Needed for Age of Functional Genomics 
ELSI: Rapid Progress Accelerates Societal Impact of Genome Research 
1999 DOE HGP Meeting Set for California 

Human Genome Project Administration 
New 5-Year Goals, Project Midpoint 
DOE, NIH Discuss Informatics 
JASON Group Review 
BER Genome Instrumentation Research 

In the News 
Private-Sector Sequencing Plan 
Bang for the Buck: Government-Backed Research Underpins Potentially High Payoff Ventures 
Palmisano Joins DOE OBER 
DNA Files series to be on NPR 
HUGO Addresses Sample Collection 
Sickle Cell Mice May Lead to New Treatments 
TIGR Sequencing 6 More Microbes 
Tuberculosis Microbe Sequenced 
C. Elegans Sequencing Nears Finish 
HGMIS Website Restructured 
cDNA Cloning Workshop Identifies Critical Issues 
Survey Identifies Growing Need for Synchrotron Analyses 
NCGR Announcements 

Publications 
Report on Functional Consequences of Gene Expression 
Book on Tuskegee Conference 
Book Focuses on Biomarker Implications, Conference Proceedings 
Genome Analysis Protocol Handbook 

Software and the Internet 
Mouse Genome Informatics Release 2.0 
New System Identifies Polymorphisms 
DOE Supports Web Site for 1997 AAAS Genome Symposium 
Expressed Human Genome Database 

Funding 
DOE ELSI 
NIH NHGRI 
NHGRI Initiates Mailing List 
U.S. Genome Research Funding 

Meeting Calendars & Acronyms 
Genome and Biotechnology Meetings 
Training Courses and Workshops 
Acronyms 


HGN archives and subscriptions   
HGP Information home 

Bang for the Buck: Government-Backed Research Underpins Potentially High Payoff Ventures

Spinoffs of Human Genome Project technologies continue to impact U.S. Industries, including medicine, environmental technology, agriculture, chemicals, and energy production. U.S. leadership in science and technology reaffirms the value of publicly funded research such as that supported at universities and national laboratories and in industry. Two recent spinoffs from the DOE Human Genome Program follow.

Biochip Agreement Aimed at Commercial Use

Companies to Refine Genome Technology for Mass Production
In June DOE announced that Argonne National Laboratory (ANL), Motorola Inc., and Packard Instrument Company have agreed to develop and mass-produce biochips. Motorola and Packard will contribute a total of $19 million over 5years, making this collaboration one of the largest biotechnology research agreements ever signed by a DOE national laboratory.

Like computer chips that execute millions of mathematical operations per second, biochips can quickly perform thousands of biological reactions. "This process, developed for DOE's Human Genome Program, provides miniaturized, faster, and more economical methods to analyze DNA samples," said former Secretary of Energy Federico Peña.

"By combining biochips with robots and computers, we can find one genetic variation among 3 billion DNA bases in a matter of minutes. Conventional methods take days," said Andrei Mirzabekov, a biologist who developed the biochips at ANL and at the Russian Engelhardt Institute of Molecular Biology. "In addition to being faster than conventional gene-sequencing methods, biochips provide a 3-D platform that allows greater sensitivity and accuracy in assaying proteins, RNA, and DNA," he noted.

Argonne's contribution, in conjunction with its Moscow research partner, consists of 19 inventions related to biological microchips that have been licensed exclusively to Motorola and Packard. These inventions are the result of more than $10million in research support since 1994 by DOE, Defense Advanced Research Projects Agency, Russian Academy of Sciences, and Russian Human Genome Program. Motorola will develop manufacturing processes to mass-produce biochips, and Packard will develop and manufacture analytical instruments to process and analyze them.

Biochips have immediate practical applications for analyzing polymorphisms, studying gene expression, and monitoring clinical trials. Richard McKernan, president of Packard, noted that within the next few years commercial biochips should bring "better, more rapidly developed pharmaceuticals; faster and more accurate medical diagnostics; a heightened ability to assess and possibly repair environmental damage; and better, more hardy, and healthier crops." The transition of biochips into the clinical diagnostics market is expected in 4 to 5 years.

Sheath-Flow Fluorescence Detection for DNA Capillary Electrophoresis

In sheath-flow systems, analytes exiting a capillary are transported in a flow of buffer and moved across interrogating laser beams. Higher sensitivity is achieved by avoiding a major source of background noise caused by direct laser action on capillaries in which DNA fragments have been separated.

Norman Dovichi [University of Edmonton, Alberta (UEA)] contributed to the development of detection systems for flow cytometry while at Los Alamos National Laboratory. Subsequently at UEA his team pioneered sheath-flow fluorescence readout technology for DNA capillary electrophoresis. In 1996 Dovichi received the American Chemical Society Award in Chemical Instrumentation for research in this project, which had some early support from DOE and major funding from Canadian sources. An article in Science 280, 995 (1998) shows a Dovichi sheath-flow detector. Detailed explanations can be accessed on the Web (http://www.chem.ualberta.ca/faculty/dovichi.htm).


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Human Genome Program, U.S. Department of Energy, Human Genome News (v9n3).

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