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Comparative Toxicogenomics Database (CTD)

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Environmental Health Perspectives Volume 112, Number 16, November 2004
Environmental Health Perspectives Toxicogenomics November 2004 In the emerging field of systems biology, scientists are using “omics” technologies and advanced computational tools, coupled with other disciplines, to begin piecing together the big picture of organism function and health.
image credit: Photodisc, Matt Ray/EHP, Joseph Tart/EHP

Purchase This Issue

  • Systems Biology
    More than the Sum of All Parts
    A 938
  • Mechanisms of Toxicity
    Gene Expression Signatures Offer Insight
    A 944
  • Estrogen’s Effects on the Uterus
    Anchoring Expression to Phenotype
    A 944

Perspectives


Editorial
p. A 926
  • Systems Biology, the Second Time Around
    Charles DeLisi
    [Full] [PDF]

Environews


Forum
p. A 930
  • The Year of the Rat
  • Getting to the Core of Antimicrobials
  • Tackling Innate Immunity
  • Cellular Jigsaw Puzzles
  • TXGnet: Y.F. Leung’s Functional Genomics
    [Full] [PDF]
NCT Update
p. A 936
  • Mass Spectrometry Group Has Mass Appeal
    [Full] [PDF]
Focus
p. A 938 Science Selections
p. A 944
  • Template for Toxicants
  • How E2 Induces Uterine Effects
    [Full] [PDF]

Toxicogenomics


Articles

Phenotypic Anchoring of Gene Expression Changes during Estrogen-Induced Uterine Growth
Jonathan G. Moggs, Helen Tinwell, Tracey Spurway, Hur-Song Chang, Ian Pate, Fei Ling Lim, David J. Moore, Anthony Soames, Ruth Stuckey, Richard Currie, Tong Zhu, Ian Kimber, John Ashby, and George Orphanides
p. 1589 [Abstract] [Full] [PDF] [Supplemental PDF]

Prediction of Toxicant-Specific Gene Expression Signatures after Chemotherapeutic Treatment of Breast Cell Lines
Melissa A. Troester, Katherine A. Hoadley, Joel S. Parker, and Charles M. Perou
p. 1607 [Abstract] [Full] [PDF] [Supplemental PDF]

The TAO-Gen Algorithm for Identifying Gene Interaction Networks with Application to SOS Repair in E. coli
Takeharu Yamanaka, Hiroyoshi Toyoshiba, Hideko Sone, Frederick M. Parham, and Christopher J. Portier
p. 1614 [Abstract][Full] [PDF]

Using Decision Forest to Classify Prostate Cancer Samples on the Basis of SELDI-TOF MS Data: Assessing Chance Correlation and Prediction Confidence
Weida Tong, Qian Xie, Huixiao Hong, Hong Fang, Leming Shi, Roger Perkins, and Emanuel F. Petricoin
p. 1622 [Abstract] [Full] [PDF]

Renal Toxicogenomic Response to Chronic Uranyl Nitrate Insult in Mice
Magali Taulan, François Paquet, Christophe Maubert, Olivia Delissen, Jacques Demaille, and Marie-Catherine Romey
p. 1628 [Abstract] [Full] [PDF]

Subchronic Exposure to TCDD, PeCDF, PCB126, and PCB153: Effect on Hepatic Gene Expression
Chad M. Vezina, Nigel J. Walker, and James R. Olson
p. 1636 [Abstract] [Full] [PDF]

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