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CCAP BAC Clones
Chromosome 6
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Map Coordinate
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BAC id
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Placement on genome1
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Placement summary3
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BAC End2
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Insert Sequence2
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STS id2
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6p25.3a |
RP11-16N9 |
chr6 1Mb |      |
B81763 SP6,
B82575 T7 |
AC012350 | |
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6p25.2a |
RP11-299J5 |
chr6 2Mb | |
AQ504936 T7,
AQ504935 SP6 |
AL359852 | |
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6p25.1c~25.2a |
RP11-15N12 |
chr6 3Mb | |
B76583 T7,
B76582 SP6 |
AL160398 | |
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6p25.1a~25.1b |
RP11-556O15 |
chr6 6Mb |   |
CL423079 T7,
CL423074 SP6 |
AL139390 | |
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6p24.3a~24.3b |
RP11-12I14 |
chr6 9Mb | |
B75830 SP6,
B75831 T7 |
AL139387 | |
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6p24.3a |
RP11-15I14 |
chr6 10Mb | |
B83514 SP6,
B76472 SP6,
B83515 T7,
B76473 T7 |
AL138877 | |
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6p24.1a |
RP11-124B11 |
chr6 12Mb | |
AQ343398 SP6,
AQ343399 T7 |
AL391829 | |
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6p23b |
RP11-27F12 |
chr6 14Mb | |
CL423113 T7,
B87071 T7,
CL423108 SP6 |
AC011917,
AL109914 | |
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6p22.3e |
RP11-686D16 |
chr6 19Mb |  |
CL423176 T7 |
AL357052 | |
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6p22.3e |
RP11-90M17 |
chr6 17Mb |  |
AQ284392 T7,
AQ284389 SP6 | | |
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6p22.3c |
RP11-33I5 |
chr6 22Mb | |
AQ046175,
CL423041 T7,
CL423038 SP6 |
AL360158 | |
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6p22.1b |
RP11-150A6 |
chr6 29Mb | |
AQ377649 SP6,
AQ377651 T7 |
AL096770 | |
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6p21.32b |
RP11-10A19 |
chr6 32Mb | |
B72694 SP6,
B72695 T7 |
AC022567 | |
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6p21.32a |
RP11-175A4 |
chr6 33Mb | |
AQ412450 SP6,
AQ412453 T7 |
AL161903 | |
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6p21.31c |
RP11-375E1 |
chr6 34Mb | |
CL423071 T7,
CL423068 SP6 |
AL157372,
BX255972,
BX255973 | |
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6p21.2c |
RP11-52A1 |
chr6 36Mb | |
AQ056955,
AQ056948 |
AC011191 | |
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6p21.2b |
RP11-14G23 |
chr6 40Mb |  |
B76277 T7,
B76276 SP6 |
AC011679 | AFMB014YF5 |
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6p21.1h |
RP11-298J23 |
chr6 41Mb | |
BH367109 T7,
CL423184 T7,
CL423177 SP6 |
AL365205 | |
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6p21.1d |
RP11-22I24 |
chr6 43Mb | |
AQ009376 T7,
B86273 SP6 |
AL353602 | |
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6p21.1a~12.3f |
RP11-79F13 |
chr6 44Mb | |
AQ284162 T7,
AQ284160 SP6 |
AC023013,
AL512379 | |
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6p12.3f |
RP11-39C2 |
chr6 47Mb | |
AQ029979 T7,
CL423045 T7,
CL423042 SP6 |
AL355518 |
AFM301WB9+,
AFM301WB9 |
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6p12.3d |
RP11-23E24 |
chr6 48Mb | |
B88668 T7,
AQ014233 |
AC018651 | |
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6p12.3b |
RP11-413D16 |
chr6 49Mb | |
AQ550686 T7,
AQ550683 SP6 |
AL356586 | |
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6p12.1d |
RP11-362K18 |
chr6 54Mb | |
CL423073 SP6,
CL423078 T7 |
AL365328 | |
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6p12.1c |
RP11-120K22 |
chr6 55Mb | |
AQ350429 SP6,
AQ350432 T7 |
AL137178 | |
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6q11.1b |
RP11-448N11 |
chr6 63Mb |  | |
AL355375 | |
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6q12d |
RP11-13B22 |
chr6 66Mb | |
CL423112 T7,
CL423107 SP6,
B75997 SP6 |
AL450319 | |
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6q12f |
RP11-301G19 |
chr6 68Mb | | |
AL713998 | |
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6q12g~13a |
RP11-29F4 |
chr6 71Mb | |
B85005 T7,
B85004 SP6 |
AC024971 | |
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6q13c |
RP11-592J5 |
chr6 74Mb | |
AQ335719 T7+,
AQ335804 SP6 |
AC068247 | |
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6q14.1a |
RP11-343P23 |
chr6 77Mb | | |
AL355612 | |
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6q14.1b |
RP11-217L13 |
chr6 79Mb | |
CL423143 SP6,
CL423146 T7 |
AC027616 |
AFM191XA3+,
AFM191XA3 |
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6q14.1d |
RP11-25P5 |
chr6 81Mb | |
AQ013491,
B82157 T7 |
AC016012 | |
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6q14.1e |
RP11-536I19 |
chr6 83Mb | |
CL423175 T7 |
AL139333 | |
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6q14.3a |
RP11-18O9 |
chr6 86Mb | |
B85521 SP6,
B85522 T7 |
AC021687 | |
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6q14.3b |
RP11-43O2 |
chr6 87Mb | |
AQ199712 |
AL390125 | stbA15J23T7 |
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6q15c |
RP11-12B13 |
chr6 89Mb | |
AZ301780 T7+,
B75711 SP6 |
AL139090 | |
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6q15d |
RP11-63K6 |
chr6 90Mb | |
AQ203078,
CL423036 SP6,
CL423037 T7,
AQ203080 |
AL353692 | |
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6q16.1a~16.1b |
RP11-538A16 |
chr6 93Mb | | |
AL356956 | |
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6q16.1d~16.1e |
RP11-386J20 |
chr6 96Mb | |
CL423067 SP6,
CL423070 T7 |
AL356303 | |
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6q16.1e |
RP11-22L21 |
chr6 97Mb | |
B86323 SP6,
AQ009070 T7,
B86324 T7 |
AL159985 | |
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6q16.3a |
RP11-142E21 |
chr6 101Mb | |
AQ389028 T7,
AQ389027 SP6 |
AL356434 | |
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6q16.3d |
RP11-327K21 |
chr6 103Mb | | |
AL357506 | |
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6q21a |
RP11-404H14 |
chr6 106Mb | |
CL423103 SP6,
CL423106 T7 |
AL356859 | |
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6q21d |
RP11-249L21 |
chr6 109Mb | |
AQ485474 SP6,
CL423137 SP6,
CL423140 T7 |
AL445189 | |
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6q21h |
RP11-237B9 |
chr6 111Mb | |
AQ481465 T7,
AQ481463 SP6 |
AC040894 | |
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6q21j~22.1a |
RP11-506B6 |
chr6 112Mb | | |
AL365214 | |
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6q22.1b |
RP11-390H10 |
chr6 114Mb | |
CL423077 T7,
CL423072 SP6 |
AL356425 | |
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6q22.1c |
RP11-510G24 |
chr6 115Mb | |
CL423111 T7 |
AL449303 | stdJ230G15SP6 |
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6q22.31a |
RP11-61K10 |
chr6 118Mb | |
AQ194253,
CL423145 T7,
CL423142 SP6,
AQ194250 |
AL355479,
AL449196 | |
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6q22.31e |
RP11-332F24 |
chr6 126Mb | |
CL423174 T7,
CL423171 SP6 |
AL389919 |
stHey2seq+ |
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6q22.33a |
RP11-325O24 |
chr6 128Mb | |
AQ537046 T7,
AQ537040 SP6 |
AL356432 | |
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6q22.33c |
RP11-593A16 |
chr6 130Mb | |
AQ337490 T7,
AQ337646 SP6 |
AL356579 | |
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6q23.2a |
RP11-456H15 |
chr6 131Mb | |
CL423035 SP6,
CL423040 T7,
AQ584535 T7 |
AL353776 | |
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6q23.2b |
RP11-435E4 |
chr6 132Mb | |
AQ585671 SP6,
AQ553522 T7 |
AL357505 | |
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6q23.3c |
RP11-133O15 |
chr6 138Mb | |
AZ521467 SP6,
AQ384440 T7 |
AC036236 | |
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6q24.1a |
RP11-15H7 |
chr6 139Mb | |
B75337 T7,
B75336 SP6 |
AL390205 |
AFM254XH1+,
AFM254XH1 |
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6q24.1b |
RP11-30G19 |
chr6 141Mb | |
B87783 T7,
B87782 SP6 |
AL591515+ | |
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6q24.1d~24.2a |
RP11-484K19 |
chr6 143Mb | |
CL423069 T7,
CL423066 SP6 |
AL355307 | |
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6q24.2c~24.3a |
RP11-43G16 |
chr6 145Mb | |
CL423105 T7,
CL423102 SP6,
AQ199386 |
AL357376 | |
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6q24.3b |
RP11-715G15 |
chr6 146Mb | |
AQ513028 SP6,
AQ517664 T7 |
AL359547 | |
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6q25.1b |
RP11-291C6 |
chr6 150Mb | |
CL423136 SP6,
CL423139 T7 |
AL451061 | stbA136K14SP6 |
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6q25.1c~25.2a |
RP11-108N8 |
chr6 151Mb | |
AQ319280 T7,
AQ349563 SP6 |
AL590543 | |
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6q25.2b |
RP11-535A9 |
chr6 153Mb | |
CL423188 SP6,
CL423355 T7 |
AL356963 | |
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6q25.2c |
RP11-455I14 |
chr6 155Mb | |
AQ587199 T7 |
AL355343 | |
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6q25.3b |
RP11-193H22 |
chr6 157Mb | |
CL423033 T7 |
AL450328 | D6S1007 |
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6q25.3d |
RP11-13P5 |
chr6 159Mb | |
B75190 SP6,
B75191 T7 |
AL356417 | |
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6q26b |
RP11-307K1 |
chr6 162Mb | | |
AC027441,
AL391833 | |
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6q27d |
RP11-37D8 |
chr6 168Mb | |
CL423144 T7,
CL423141 SP6 |
AL442124 | |
1 FISH-mapped clone was placed on the sequenced
genome based on BAC-ends, insert sequences and STSs.
2 Sequences that are associated with the clone
and used for clone placement.
* indicates
sequences that disagree with data in 'Placement on genome' column.
+ indicates sequences that didn't align to the
genome or were not used for annotation.
3 Placement summary indicates sequences
used for clone placement.
BAC-end sequence aligned in the plus orientation
 BAC-end sequence aligned in the minus orientation
insert sequence
 STS aligned
insert sequence has clone end information.
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