| | Editorial Publishing proteomic data Martin Latterich Proteome Sci. 2006; 4: 8. Published online 2006 April 28. doi: 10.1186/1477-5956-4-8.PMCID: PMC1501001 Methodology Estimating probabilities of peptide database identifications to LC-FTICR-MS observations Kevin K Anderson, Matthew E Monroe, and Don S Daly Proteome Sci. 2006; 4: 1. Published online 2006 February 24. doi: 10.1186/1477-5956-4-1.PMCID: PMC1450261 Optimising the Use of TRIzol-extracted Proteins in Surface Enhanced Laser Desorption/ Ionization (SELDI) Analysis Tsz-Kwong Man, Yiting Li, Tu Anh Dang, Jianhe Shen, Laszlo Perlaky, and Ching C Lau Proteome Sci. 2006; 4: 3. Published online 2006 March 23. doi: 10.1186/1477-5956-4-3.PMCID: PMC1440846 Optimization and evaluation of surface-enhanced laser-desorption/ionization time-of-flight mass spectrometry for protein profiling of cerebrospinal fluid Nelson Guerreiro, Baltazar Gomez-Mancilla, and Stéphane Charmont Proteome Sci. 2006; 4: 7. Published online 2006 April 27. doi: 10.1186/1477-5956-4-7.PMCID: PMC1464122 Competition between bound and free peptides in an ELISA-based procedure that assays peptides derived from protein digests Ori Braitbard, Hava Glickstein, Janette Bishara-Shieban, Umberto Pace, and Wilfred D Stein Proteome Sci. 2006; 4: 12. Published online 2006 May 31. doi: 10.1186/1477-5956-4-12.PMCID: PMC1482681 An ELISA-based procedure for assaying proteins in digests of human leukocytes and cell lines, using specifically selected peptides and appropriate antibodies Ori Braitbard, Janette Bishara-Shieban, Hava Glickstein, Miriam Kott-Gutkowski, Umberto Pace, Deborah G Rund, and Wilfred D Stein Proteome Sci. 2006; 4: 14. Published online 2006 June 21. doi: 10.1186/1477-5956-4-14.PMCID: PMC1513550 Data processing and classification analysis of proteomic changes: a case study of oil pollution in the mussel, Mytilus edulis Tiphaine Monsinjon, Odd Ketil Andersen, François Leboulenger, and Thomas Knigge Proteome Sci. 2006; 4: 17. Published online 2006 September 13. doi: 10.1186/1477-5956-4-17.PMCID: PMC1592071 Analytical model of peptide mass cluster centres with applications Witold E Wolski, Malcolm Farrow, Anne-Katrin Emde, Hans Lehrach, Maciej Lalowski, and Knut Reinert Proteome Sci. 2006; 4: 18. Published online 2006 September 23. doi: 10.1186/1477-5956-4-18.PMCID: PMC1617084 Interest of major serum protein removal for Surface-Enhanced Laser Desorption/Ionization – Time Of Flight (SELDI-TOF) proteomic blood profiling Stéphane Roche, Laurent Tiers, Monique Provansal, Marie-Thérèse Piva, and Sylvain Lehmann Proteome Sci. 2006; 4: 20. Published online 2006 October 5. doi: 10.1186/1477-5956-4-20.PMCID: PMC1613235 Signal stability of Cy3 and Cy5 on antibody microarrays Qiang Gu, Thamil Mani Sivanandam, and Caroline Aehyun Kim Proteome Sci. 2006; 4: 21. Published online 2006 October 11. doi: 10.1186/1477-5956-4-21.PMCID: PMC1633729 Reviews A systems approach to clinical oncology: Focus on breast cancer Mark Abramovitz and Brian Leyland-Jones Proteome Sci. 2006; 4: 5. Published online 2006 April 4. doi: 10.1186/1477-5956-4-5.PMCID: PMC1456950 Phosphoprotein analysis: from proteins to proteomes Frédéric Delom and Eric Chevet Proteome Sci. 2006; 4: 15. Published online 2006 July 19. doi: 10.1186/1477-5956-4-15.PMCID: PMC1557478 Research Protein cleavage strategies for an improved analysis of the membrane proteome Frank Fischer and Ansgar Poetsch Proteome Sci. 2006; 4: 2. Published online 2006 March 2. doi: 10.1186/1477-5956-4-2.PMCID: PMC1458320 Proteins pattern alteration in AZT-treated K562 cells detected by two-dimensional gel electrophoresis and peptide mass fingerprinting Gabriele D'Andrea, Anna R Lizzi, Sara Venditti, Laura Di Francesco, Alessandra Giorgi, Giuseppina Mignogna, Arduino Oratore, and Argante Bozzi Proteome Sci. 2006; 4: 4. Published online 2006 March 29. doi: 10.1186/1477-5956-4-4.PMCID: PMC1435870 Proteomic analysis of acidic chaperones, and stress proteins in extreme halophile Halobacterium NRC-1: a comparative proteomic approach to study heat shock response Hem D Shukla Proteome Sci. 2006; 4: 6. Published online 2006 April 19. doi: 10.1186/1477-5956-4-6.PMCID: PMC1475562 Proteomic identification of Drosophila melanogaster male accessory gland proteins, including a pro-cathepsin and a soluble γ-glutamyl transpeptidase Michael J Walker, Caroline M Rylett, Jeff N Keen, Neil Audsley, Mohammed Sajid, Alan D Shirras, and R Elwyn Isaac Proteome Sci. 2006; 4: 9. Published online 2006 May 2. doi: 10.1186/1477-5956-4-9.PMCID: PMC1462989 High-throughput screening of cellulase F mutants from multiplexed plasmid sets using an automated plate assay on a functional proteomic robotic workcell Stephen R Hughes, Steven B Riedmuller, Jeffrey A Mertens, Xin-Liang Li, Kenneth M Bischoff, Nasib Qureshi, Michael A Cotta, and Philip J Farrelly Proteome Sci. 2006; 4: 10. Published online 2006 May 2. doi: 10.1186/1477-5956-4-10.PMCID: PMC1479318 Ontogenetic variations in the venom proteome of the Amazonian snake Bothrops atrox Rafael AP Guércio, Anna Shevchenko, Andrej Shevchenko, Jorge L López-Lozano, Jaime Paba, Marcelo V Sousa, and Carlos AO Ricart Proteome Sci. 2006; 4: 11. Published online 2006 May 11. doi: 10.1186/1477-5956-4-11.PMCID: PMC1483819 Proteome-level display by 2-dimensional chromatography of extracellular matrix-dependent modulation of the phenotype of bladder cancer cells Robert E Hurst, Kimberly D Kyker, Mikhail G Dozmorov, Nobuaki Takemori, Anil Singh, Hiroyuki Matsumoto, Ricardo Saban, Edna Betgovargez, and Michael H Simonian Proteome Sci. 2006; 4: 13. Published online 2006 June 2. doi: 10.1186/1477-5956-4-13.PMCID: PMC1534010 Two-dimensional gel proteome reference map of blood monocytes Ming Jin, Philip T Diaz, Tran Bourgeois, Charis Eng, Clay B Marsh, and Haifeng M Wu Proteome Sci. 2006; 4: 16. Published online 2006 September 1. doi: 10.1186/1477-5956-4-16.PMCID: PMC1634993 Comparative proteomic analysis of high cell density cultivations with two recombinant Bacillus megaterium strains for the production of a heterologous dextransucrase Wei Wang, Rajan Hollmann, and Wolf-Dieter Deckwer Proteome Sci. 2006; 4: 19. Published online 2006 October 5. doi: 10.1186/1477-5956-4-19.PMCID: PMC1622742 The use of proteomics in identifying differentially expressed serum proteins in humans with type 2 diabetes Tea Sundsten, Michael Eberhardson, Michael Göransson, and Peter Bergsten Proteome Sci. 2006; 4: 22. Published online 2006 December 12. doi: 10.1186/1477-5956-4-22.PMCID: PMC1716156 Effect of long-term exposure of SH-SY5Y cells to morphine: a whole cell proteomic analysis Jérémie Neasta, Sandrine Uttenweiler-Joseph, Karima Chaoui, Bernard Monsarrat, Jean-Claude Meunier, and Lionel Moulédous Proteome Sci. 2006; 4: 23. Published online 2006 December 21. doi: 10.1186/1477-5956-4-23.PMCID: PMC1766345 |