| | Methodology Proteomics profiling of urine with surface enhanced laser desorption/ionization time of flight mass spectrometry Han Roelofsen, Gloria Alvarez-Llamas, Marianne Schepers, Karloes Landman, and Roel J Vonk PMCID: PMC1783644 PrestOMIC, an open source application for dissemination of proteomic datasets by individual laboratories Charles G Howes and Leonard J Foster PMCID: PMC1892544 Laboratory methods to improve SELDI peak detection and quantitation Dominique Rollin, Toni Whistler, and Suzanne D Vernon PMCID: PMC1934350 A method for improving SELDI-TOF mass spectrometry data quality Toni Whistler, Dominique Rollin, and Suzanne D Vernon PMCID: PMC2040139 SELDI-TOF mass spectrometry of High-Density Lipoprotein Johannes HM Levels, Boris Bleijlevens, Farhad Rezaee, Johannes MFG Aerts, and Joost CM Meijers PMCID: PMC2020459 Increase in local protein concentration by field-inversion gel electrophoresis Henghang Tsai, Teck Yew Low, Steve Freeby, Aran Paulus, Kalpana Ramnarayanan, Chung-pui Paul Cheng, and Hon-chiu Eastwood Leung PMCID: PMC2211458 Research Proteomic analysis of tyrosine phosphorylation during human liver transplantation Anouk Emadali, Peter P Metrakos, Fariba Kalantari, Tarek Boutros, Daniel Boismenu, and Eric Chevet PMCID: PMC1769479 Methods for peptide identification by spectral comparison Jian Liu, Alexander W Bell, John JM Bergeron, Corey M Yanofsky, Brian Carrillo, Christian EH Beaudrie, and Robert E Kearney PMCID: PMC1783643 An informatic pipeline for the data capture and submission of quantitative proteomic data using iTRAQTM Jennifer A Siepen, Neil Swainston, Andrew R Jones, Sarah R Hart, Henning Hermjakob, Philip Jones, and Simon J Hubbard PMCID: PMC1796855 Identification of differentially regulated proteins in a patient with Leber's Congenital Amaurosis – a proteomic study Henrik Vorum, Morten Østergaard, Greg E Rice, Bent Honoré, and Toke Bek PMCID: PMC1821315 Proteome characterization of a human urothelial cell line resistant to the bladder carcinogen 4-aminobiphenyl Roberta Pastorelli, Federica Saletta, Donatella Carpi, Roberta Campagna, Carlo dell'Osta, Silvia Schiarea, Paolo Vineis, Luisa Airoldi, and Giuseppe Matullo PMCID: PMC1871571 SELDI-TOF-MS ProteinChip array profiling of T-cell clones propagated in long-term culture identifies human profilin-1 as a potential bio-marker of immunosenescence Dawn J Mazzatti, Graham Pawelec, Robin Longdin, Jonathan R Powell, and Rosalyn J Forsey PMCID: PMC1892543 Comparative proteomics reveal characteristics of life-history transitions in a social insect Florian Wolschin and Gro V Amdam PMCID: PMC1964756 Bacillus anthracis secretome time course under host-simulated conditions and identification of immunogenic proteins Alexander Walz, Cesar V Mujer, Joseph P Connolly, Tim Alefantis, Ryan Chafin, Clarissa Dake, Jessica Whittington, Srikanta P Kumar, Akbar S Khan, and Vito G DelVecchio PMCID: PMC1949399 Proteomic analysis of plasma membrane and secretory vesicles from human neutrophils Deepa Jethwaney, Md Rafiqul Islam, Kevin G Leidal, Daniel Beltran-Valero de Bernabe, Kevin P Campbell, William M Nauseef, and Bradford W Gibson PMCID: PMC2075486 Proteomic analyses of retina of excitatory amino acid carrier 1 deficient mice Hideaki Okumichi, Takashi Kanamoto, Nazariy Souchelnytskyi, Seiji Tanimoto, Kohichi Tanaka, and Yoshiaki Kiuchi PMCID: PMC2014740 Comparative proteome analysis of human epithelial ovarian cancer Jean-Philippe Gagné, Chantal Éthier, Pierre Gagné, Geneviève Mercier, Marie-Ève Bonicalzi, Anne-Marie Mes-Masson, Arnaud Droit, Eric Winstall, Maxim Isabelle, and Guy G Poirier PMCID: PMC2072939 Quantifying raft proteins in neonatal mouse brain by 'tube-gel' protein digestion label-free shotgun proteomics Hongwei Yu, Bassam Wakim, Man Li, Brian Halligan, G Stephen Tint, and Shailendra B Patel PMCID: PMC2045652 Age-related subproteomic analysis of mouse liver and kidney peroxisomes Jia Mi, Itsaso Garcia-Arcos, Ruben Alvarez, and Susana Cristobal PMCID: PMC2231346 Surface antigens and potential virulence factors from parasites detected by comparative genomics of perfect amino acid repeats Niklaus Fankhauser, Tien-Minh Nguyen-Ha, Joël Adler, and Pascal Mäser PMCID: PMC2254594 |
