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Volume 14(6);  June 2005
Commentary
Proteins from PHB granules
George Georgiou and Ki Jun Jeong
Protein Sci. 2005 June; 14(6): 1385–1386. doi: 10.1110/ps.051418305.
PMCID: PMC2253391
Articles
Novel and economical purification of recombinant proteins: Intein-mediated protein purification using in vivo polyhydroxybutyrate (PHB) matrix association
Mahmoud Reza Banki, Tillman U. Gerngross, and David W. Wood
Protein Sci. 2005 June; 14(6): 1387–1395. doi: 10.1110/ps.041296305.
PMCID: PMC2253394
p25α is flexible but natively folded and binds tubulin with oligomeric stoichiometry
Daniel E. Otzen, Ditte M.S. Lundvig, Reinhard Wimmer, Lotte H. Nielsen, Jakob R. Pedersen, and Poul H. Jensen
Protein Sci. 2005 June; 14(6): 1396–1409. doi: 10.1110/ps.041285605.
PMCID: PMC2253386
Human full-length Securin is a natively unfolded protein
Nuria Sánchez-Puig, Dmitry B. Veprintsev, and Alan R. Fersht
Protein Sci. 2005 June; 14(6): 1410–1418. doi: 10.1110/ps.051368005.
PMCID: PMC2253381
The influence of phospholipid membranes on bovine calcitonin secondary structure and amyloid formation
Steven S.-S. Wang, Theresa A. Good, and Dawn L. Rymer
Protein Sci. 2005 June; 14(6): 1419–1428. doi: 10.1110/ps.041240105.
PMCID: PMC2253368
Calcium- and magnesium-dependent interactions between calcium- and integrin-binding protein and the integrin αIIb cytoplasmic domain
Aaron P. Yamniuk and Hans J. Vogel
Protein Sci. 2005 June; 14(6): 1429–1437. doi: 10.1110/ps.041312805.
PMCID: PMC2253396
Mass spectrometric analysis of the human 40S ribosomal subunit: Native and HCV IRES-bound complexes
Yonghao Yu, Hong Ji, Jennifer A. Doudna, and Julie A. Leary
Protein Sci. 2005 June; 14(6): 1438–1446. doi: 10.1110/ps.041293005.
PMCID: PMC2253395
Pretransition and progressive softening of bovine carbonic anhydrase II as probed by single molecule atomic force microscopy
Rehana Afrin, Mohammad T. Alam, and Atsushi Ikai
Protein Sci. 2005 June; 14(6): 1447–1457. doi: 10.1110/ps.041282305.
PMCID: PMC2253376
N-terminal acetylation and protonation of individual hemoglobin subunits: Position-dependent effects on tetramer strength and cooperativity
Makoto Ashiuchi, Takeshi Yagami, Ronald J. Willey, Julio C. Padovan, Brian T. Chait, Anthony Popowicz, Lois R. Manning, and James M. Manning
Protein Sci. 2005 June; 14(6): 1458–1471. doi: 10.1110/ps.041267405.
PMCID: PMC2253374
Structural and functional characterization of CFE88: Evidence that a conserved and essential bacterial protein is a methyltransferase
Keith L. Constantine, Stanley R. Krystek, Matthew D. Healy, Michael L. Doyle, Nathan O. Siemers, Jane Thanassi, Ning Yan, Dianlin Xie, Valentina Goldfarb, Joseph Yanchunas, Li Tao, Brian A. Dougherty, and Bennett T. Farmer, II
Protein Sci. 2005 June; 14(6): 1472–1484. doi: 10.1110/ps.051389605.
PMCID: PMC2253378
Comparison of crystal structures of human type 3 3α-hydroxysteroid dehydrogenase reveals an “induced-fit” mechanism and a conserved basic motif involved in the binding of androgen
Jean-François Couture, Karine Pereira De Jésus-Tran, Anne-Marie Roy, Line Cantin, Pierre-Luc Côté, Pierre Legrand, Van Luu-The, Fernand Labrie, and Rock Breton
Protein Sci. 2005 June; 14(6): 1485–1497. doi: 10.1110/ps.051353205.
PMCID: PMC2253370
Strain relief at the active site of phosphoserine aminotransferase induced by radiation damage
Anatoly P. Dubnovitsky, Raimond B.G. Ravelli, Alexander N. Popov, and Anastassios C. Papageorgiou
Protein Sci. 2005 June; 14(6): 1498–1507. doi: 10.1110/ps.051397905.
PMCID: PMC2253390
X-ray structure of putative acyl-ACP desaturase DesA2 from Mycobacterium tuberculosis H37Rv
David H. Dyer, Karen S. Lyle, Ivan Rayment, and Brian G. Fox
Protein Sci. 2005 June; 14(6): 1508–1517. doi: 10.1110/ps.041288005.
PMCID: PMC2253383
A reaction landscape identifies the intermediates critical for self-assembly of virus capsids and other polyhedral structures
Dan Endres, Masaki Miyahara, Paul Moisant, and Adam Zlotnick
Protein Sci. 2005 June; 14(6): 1518–1525. doi: 10.1110/ps.041314405.
PMCID: PMC2253392
Structural model of the amino propeptide of collagen XI α1 chain with similarity to the LNS domains
Arzhang Fallahi, Becky Kroll, Lisa R. Warner, Rex J. Oxford, Katey M. Irwin, Linda M. Mercer, Susan E. Shadle, and Julia Thom Oxford
Protein Sci. 2005 June; 14(6): 1526–1537. doi: 10.1110/ps.051363105.
PMCID: PMC2253380
Polyarginine as a multifunctional fusion tag
Stephen M. Fuchs and Ronald T. Raines
Protein Sci. 2005 June; 14(6): 1538–1544. doi: 10.1110/ps.051393805.
PMCID: PMC2253384
Domain swapping in the low-similarity isomerase/hydratase superfamily: The crystal structure of rat mitochondrial Δ3, Δ2-enoyl-CoA isomerase
Paul A. Hubbard, Wenfeng Yu, Horst Schulz, and Jung-Ja P. Kim
Protein Sci. 2005 June; 14(6): 1545–1555. doi: 10.1110/ps.041303705.
PMCID: PMC2253373
Backbone nuclear relaxation characteristics and calorimetric investigation of the human Grb7-SH2/erbB2 peptide complex
Monika Ivancic, Anne M. Spuches, Ethan C. Guth, Margaret A. Daugherty, Dean E. Wilcox, and Barbara A. Lyons
Protein Sci. 2005 June; 14(6): 1556–1569. doi: 10.1110/ps.041102305.
PMCID: PMC2253377
The crystal structure of PfFabZ, the unique β-hydroxyacyl-ACP dehydratase involved in fatty acid biosynthesis of Plasmodium falciparum
Dirk Kostrewa, Fritz K. Winkler, Gerd Folkers, Leonardo Scapozza, and Remo Perozzo
Protein Sci. 2005 June; 14(6): 1570–1580. doi: 10.1110/ps.051373005.
PMCID: PMC2253385
On the nucleation of amyloid β-protein monomer folding
Noel D. Lazo, Marianne A. Grant, Margaret C. Condron, Alan C. Rigby, and David B. Teplow
Protein Sci. 2005 June; 14(6): 1581–1596. doi: 10.1110/ps.041292205.
PMCID: PMC2253382
High-quality homology models derived from NMR and X-ray structures of E. coli proteins YgdK and Suf E suggest that all members of the YgdK/Suf E protein family are enhancers of cysteine desulfurases
Gaohua Liu, Zhaohui Li, Yiwen Chiang, Thomas Acton, Gaetano T. Montelione, Diana Murray, and Thomas Szyperski
Protein Sci. 2005 June; 14(6): 1597–1608. doi: 10.1110/ps.041322705.
PMCID: PMC2253389
Asymmetric effect of domain interactions on the kinetics of folding in yeast phosphoglycerate kinase
Szabolcs Osváth, Gottfried Köhler, Péter Závodszky, and Judit Fidy
Protein Sci. 2005 June; 14(6): 1609–1616. doi: 10.1110/ps.051359905.
PMCID: PMC2253372
Spectrin R16: Broad energy barrier or sequential transition states?
Kathryn A. Scott and Jane Clarke
Protein Sci. 2005 June; 14(6): 1617–1629. doi: 10.1110/ps.051377105.
PMCID: PMC2253375
The prokaryotic enzyme DsbB may share key structural features with eukaryotic disulfide bond forming oxidoreductases
Carolyn S. Sevier, Hiroshi Kadokura, Vincent C. Tam, Jon Beckwith, Deborah Fass, and Chris A. Kaiser
Protein Sci. 2005 June; 14(6): 1630–1642. doi: 10.1110/ps.051355705.
PMCID: PMC2253379
A critical assessment of the topomer search model of protein folding using a continuum explicit-chain model with extensive conformational sampling
Stefan Wallin and Hue Sun Chan
Protein Sci. 2005 June; 14(6): 1643–1660. doi: 10.1110/ps.041317705.
PMCID: PMC2253387
Capsid structure and dynamics of a human rhinovirus probed by hydrogen exchange mass spectrometry
Lintao Wang and David L. Smith
Protein Sci. 2005 June; 14(6): 1661–1672. doi: 10.1110/ps.051390405.
PMCID: PMC2253393
Protein Structure Reports
The solution structure of the oxidative stress-related protein YggX from Escherichia coli
Michael J. Osborne, Nadeem Siddiqui, Dirk Landgraf, Pablo J. Pomposiello, and Kalle Gehring
Protein Sci. 2005 June; 14(6): 1673–1678. doi: 10.1110/ps.051358105.
PMCID: PMC2253388
Crystal structure of the protease-resistant core domain of Yersinia pestis virulence factor YopR
Florian D. Schubot, Scott Cherry, Brian P. Austin, Joseph E. Tropea, and David S. Waugh
Protein Sci. 2005 June; 14(6): 1679–1683. doi: 10.1110/ps.051446405.
PMCID: PMC2253397
For the Record
HU-α binds to the putative double-stranded DNA mimic HI1450 from Haemophilus influenzae
Lisa M. Parsons, Fang Liu, and John Orban
Protein Sci. 2005 June; 14(6): 1684–1687. doi: 10.1110/ps.041275705.
PMCID: PMC2253369
Correction
CORRECTION
Protein Sci. 2005 June; 14(6): 1688.
PMCID: PMC2253371
Corrects: Glen Spraggon, et al. On the use of DXMS to produce more crystallizable proteins: Structures of the T. maritima proteins TM0160 and TM1171. Protein Sci. 2004 December; 13(12): 3187–3199.
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