| | This journal provides immediate access to some articles. Review Not all J domains are created equal: Implications for the specificity of Hsp40–Hsp70 interactions Fritha Hennessy, William S. Nicoll, Richard Zimmermann, Michael E. Cheetham, and Gregory L. Blatch PMCID: PMC2253343 Articles An NMR view of the unfolding process of rusticyanin: Structural elements that maintain the architecture of a β-barrel metalloprotein Luis A. Alcaraz, Beatriz Jiménez, José María Moratal, and Antonio Donaire PMCID: PMC2253362 Improved membrane protein topology prediction by domain assignments Andreas Bernsel and Gunnar Von Heijne PMCID: PMC2253350 Design of improved membrane protein production experiments: Quantitation of the host response Nicklas Bonander, Kristina Hedfalk, Christer Larsson, Petter Mostad, Celia Chang, Lena Gustafsson, and Roslyn M. Bill PMCID: PMC2253360 Lessons from the design of a novel atomic potential for protein folding William W. Chen and Eugene I. Shakhnovich PMCID: PMC2253347 The aggregation kinetics of Alzheimer’s β-amyloid peptide is controlled by stochastic nucleation Peter Hortschansky, Volker Schroeckh, Tony Christopeit, Giorgia Zandomeneghi, and Marcus Fändrich PMCID: PMC2253354 Crystallographic studies on acyl ureas, a new class of glycogen phosphorylase inhibitors, as potential antidiabetic drugs Nikos G. Oikonomakos, Magda N. Kosmopoulou, Evangelia D. Chrysina, Demetres D. Leonidas, Ioannis D. Kostas, K. Ulrich Wendt, Thomas Klabunde, and Elisabeth Defossa PMCID: PMC2253349 Protein flexibility prediction by an all-atom mean-field statistical theory B.P. Pandey, Chi Zhang, Xianzhang Yuan, Jian Zi, and Yaoqi Zhou PMCID: PMC2253361 Identifying Plasmodium falciparum merozoite surface antigen 3 (MSP3) protein peptides that bind specifically to erythrocytes and inhibit merozoite invasion Luis E. Rodríguez, Hernando Curtidor, Marisol Ocampo, Javier Garcia, Alvaro Puentes, John Valbuena, Ricardo Vera, Ramses López, and Manuel E. Patarroyo PMCID: PMC2253348 Protein dynamics control proton transfer from bulk solvent to protein interior: A case study with a green fluorescent protein Anoop M. Saxena, Jayant B. Udgaonkar, and Guruswamy Krishnamoorthy PMCID: PMC2253357 Assessing strategies for improved superfamily recognition Ian Sillitoe, Mark Dibley, James Bray, Sarah Addou, and Christine Orengo PMCID: PMC2253352 Urea-induced denaturation of apolipoprotein serum amyloid A reveals marginal stability of hexamer Limin Wang and Wilfredo Colón PMCID: PMC2253367 Investigation of protein refolding using a fractional factorial screen: A study of reagent effects and interactions Melissa Swope Willis, James K. Hogan, Prakash Prabhakar, Xun Liu, Kuenhi Tsai, Yunyi Wei, and Ted Fox PMCID: PMC2253366 Boundaries and physical characterization of a new domain shared between mammalian 53BP1 and yeast Rad9 checkpoint proteins Béatrice Alpha-Bazin, Alain Lorphelin, Nathalie Nozerand, Gaëlle Charier, Charles Marchetti, Frédéric Bérenguer, Joël Couprie, Bernard Gilquin, Sophie Zinn-Justin, and Eric Quéméneur PMCID: PMC2253359 Crystal structure of methylenetetrahydromethanopterin reductase (Mer) in complex with coenzyme F420: Architecture of the F420/FMN binding site of enzymes within the nonprolyl cis-peptide containing bacterial luciferase family Stephan W. Aufhammer, Eberhard Warkentin, Ulrich Ermler, Christoph H. Hagemeier, Rudolf K. Thauer, and Seigo Shima PMCID: PMC2253363 Rv0216, a conserved hypothetical protein from Mycobacterium tuberculosis that is essential for bacterial survival during infection, has a double hotdog fold Alina Castell, Patrik Johansson, Torsten Unge, T. Alwyn Jones, and Kristina Bäckbro PMCID: PMC2253346 The crystal structure of TrxA(CACA): Insights into the formation of a [2Fe-2S] iron–sulfur cluster in an Escherichia coli thioredoxin mutant Jean-Francois Collet, Daniel Peisach, James C.A. Bardwell, and Zhaohui Xu PMCID: PMC2253358 Structural analysis of an HIV-1 protease I47A mutant resistant to the protease inhibitor lopinavir Ron M. Kagan, Mark D. Shenderovich, Peter N.R. Heseltine, and Kal Ramnarayan PMCID: PMC2253353 Characterization of calretinin I–II as an EF-hand, Ca2+, H+-sensing domain Małgorzata Palczewska, Gyula Batta, Patrick Groves, Sara Linse, and Jacek Kuźnicki PMCID: PMC2253342 Protein Structure Reports Crystal structure of an enhancer of rudimentary homolog (ERH) at 2.1 Å resolution Ryoichi Arai, Mutsuko Kukimoto-Niino, Hiroko Uda-Tochio, Satoshi Morita, Tomomi Uchikubo-Kamo, Ryogo Akasaka, Yuuka Etou, Yoshihide Hayashizaki, Takanori Kigawa, Takaho Terada, Mikako Shirouzu, and Shigeyuki Yokoyama PMCID: PMC2253356 Solution structure and backbone dynamics of Calsensin, an invertebrate neuronal calcium-binding protein Deepa V. Venkitaramani, D. Bruce Fulton, Amy H. Andreotti, Kristen M. Johansen, and Jørgen Johansen PMCID: PMC2253341 For the Record DOM-fold: A structure with crossing loops found in DmpA, ornithine acetyltransferase, and molybdenum cofactor-binding domain Hua Cheng and Nick V. Grishin PMCID: PMC2253344 Do all backbone polar groups in proteins form hydrogen bonds? Patrick J. Fleming and George D. Rose PMCID: PMC2253345 Mycobacterium tuberculosis serine/threonine kinases PknB, PknD, PknE, and PknF phosphorylate multiple FHA domains Christoph Grundner, Laurie M. Gay, and Tom Alber PMCID: PMC2253351 Characterization of peptide folding nuclei by hydrogen/deuterium exchange-mass spectrometry Xue Li, Robin J. Hood, William J. Wedemeyer, and J. Throck Watson PMCID: PMC2253355 Stereo-selectivity of HIV-1 reverse transcriptase toward isomers of thymidine-5′-O-1-thiotriphosphate Jessica Radzio and Nicolas Sluis-Cremer PMCID: PMC2253364 Charge–charge interactions in the denatured state influence the folding kinetics of ribonuclease Sa Jared M. Trefethen, C. Nick Pace, J. Martin Scholtz, and David N. Brems PMCID: PMC2253365 |
