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CCAP BAC Clones
Chromosome 12
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Map Coordinate
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BAC id
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Placement on genome1
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Placement summary3
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BAC End2
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Insert Sequence2
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STS id2
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12p13.33d |
RP11-283I3 |
chr12 0Mb |      |
CL423197 SP6,
CL423202 T7 |
AC007406 | D12S1256 |
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12p13.33c~13.33d |
RP11-359B12 |
chr12 0Mb | |
AQ540644 T7,
AQ540642 SP6 |
AC004803 | D12S1913 |
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12p13.33a |
RP11-407G6 |
chr12 2Mb |   | |
AC005866 | D12S1443 |
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12p13.32b |
RP11-543P15 |
chr12 3Mb |   | |
AC005912 | D12S1626 |
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12p13.32a~13.32b |
RP11-388F6 |
chr12 4Mb | | |
AC008012 | D12S1725 |
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12p13.32a |
RP11-319E16 |
chr12 5Mb | |
AQ536899 T7,
AQ536898 SP6 |
AC006206 | D12S93 |
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12p13.31e~13.32a |
RP11-451H11 |
chr12 5Mb | |
AQ585033 T7,
AQ585029 SP6 |
AC006431 | D12S374 |
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12p13.31c |
RP11-433J6 |
chr12 6Mb |  |
CL423328 T7,
CL423323 SP6 |
AC079387,
AC135892 | |
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12p13.2c~13.31a |
RP11-277E18 |
chr12 7Mb | | |
AC007536 | D12S397 |
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12p13.2b |
RP11-13C13 |
chr12 10Mb | |
AZ521024 SP6,
B73268 T7 |
AC006510 | AFM311VC1 |
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12p13.2b |
RP11-90N7 |
chr12 11Mb |  |
AQ284534 SP6,
AZ518608 T7,
AQ284535 T7 | | |
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12p13.2a |
RP11-144O23 |
chr12 10Mb | |
AQ388065 T7 |
AC006518 | D12S841 |
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12p13.1b |
RP11-4N23 |
chr12 13Mb | | |
AC007527 | D12S320 |
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12p13.1a |
RP11-502N13 |
chr12 14Mb | | |
AC008114 |
D12S308* |
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12p13.1a |
RP11-502N13 |
chr12 14Mb |    | |
AC008114* | D12S308 |
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12p12.3e |
RP11-1018J8 |
chr12 15Mb | | |
AC007543 | D12S62 |
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12p12.3d |
RP11-489N6 |
chr12 15Mb | |
AQ634921 SP6 |
AC018654 | RH44647,
RH52620 |
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12p12.3c |
RP11-69C13 |
chr12 16Mb | |
AQ267430 SP6,
AQ267433 T7 |
AC007529 | D12S1630 |
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12p12.3b |
RP11-871F6 |
chr12 17Mb | |
AQ792168 T7,
AZ124122 |
AC048352 | D12S363 |
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12p12.1e |
RP11-125O5 |
chr12 21Mb | |
AQ347539 SP6,
AZ081765,
AQ347541 T7 |
AC022335 | D12S1085 |
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12p12.1d~12.1c |
RP11-729I10 |
chr12 21Mb | |
AQ616697 SP6,
AQ616617 T7 |
AC008250 | |
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12p12.1c |
RP11-12D15 |
chr12 22Mb | |
B75736 T7,
B75735 SP6 |
AC007544 | D12S1688,
SHGC-12597 |
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12p12.1b |
RP11-877E17 |
chr12 25Mb | |
AQ782762 T7,
AQ563037 SP6 |
AC055707 | D12S1034 |
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12p11.23 |
RP11-666F17 |
chr12 26Mb | | |
AC023051 | D12S68 |
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12p11.22b |
RP11-1060J15 |
chr12 27Mb | | |
AC009509 | WI-20340 |
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12p11.22a~11.22b |
RP11-485K18 |
chr12 28Mb | |
AQ633254 SP6 |
AC024939 | B847A19/T7 |
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12p11.22a |
RP11-780A5 |
chr12 29Mb | |
AQ461552 T7,
AQ495198 SP6 |
AC023281 | D12S290 |
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12p11.21b~11.22a |
RP11-517B23 |
chr12 31Mb | |
CL423301 SP6,
CL423306 T7 |
AC011324 | WI-21216 |
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12p11.21a |
RP11-956A19 |
chr12 32Mb | |
CL423334 SP6,
AZ124118 |
AC016954 |
D12S345+ |
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12p11.1a |
RP11-460N10 |
chr12 33Mb | | |
AC021070 | D12S1307 |
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12q11 |
RP11-496H24 |
chr12 36Mb | | |
AC020654,
AC090623 | D12S1931 |
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12q11~12 |
RP11-152M7 |
chr12 37Mb | |
AQ380395 SP6,
AQ380396 T7 |
AC069442 | D12S331 |
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12q12a~12b |
RP11-503D9 |
chr12 38Mb | | |
AC016150 |
D12S1469+,
D12S1469 |
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12q12c |
RP11-498B21 |
chr12 39Mb | |
CL423269 SP6,
CL423274 T7 |
AC021651 | |
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12q12d |
RP11-490D11 |
chr12 40Mb | |
AQ634999 SP6+,
CL423310 T7,
CL423308 SP6 |
AC087895 | WI-21835 |
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12q12e~12f |
RP11-510P12 |
chr12 41Mb | | |
AC068802 | D12S1080 |
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12q12f |
RP11-624G19 |
chr12 42Mb | |
AQ404716 T7,
AQ371239 SP6 |
AC076972 | D12S1663 |
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12q12g |
RP11-559C10 |
chr12 43Mb | |
CL423341 T7 |
AC018923 | WI-21180 |
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12q12g~12h |
RP11-176J16 |
chr12 43Mb | |
CL423208 T7,
CL423204 SP6,
AQ414264 SP6 |
AC079825 | |
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12q12h |
RP11-139E19 |
chr12 43Mb | |
AQ385671 SP6,
AQ385672 T7 |
AC009248 | D12S1314,
SHGC-33633 |
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12q13.11~13.12 |
RP11-72A13 |
chr12 48Mb | |
AQ284985 SP6,
AQ266962 T7 |
AC009246 | SHGC-33198 |
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12q13.11b |
RP11-480H15 |
chr12 47Mb | |
CL423240 T7,
AQ635619 T7,
AZ124156 |
AC009775 | 7600 |
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12q13.13c~13.13d |
RP11-1100L3 |
chr12 50Mb | |
AQ719509 SP6+ |
AC025259 | D12S1712 |
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12q13.13e |
RP11-624J6 |
chr12 51Mb | |
AQ405075 SP6,
AQ404983 T7 |
AC021072 | WI-11660 |
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12q13.13f |
RP11-972K6 |
chr12 52Mb | |
AQ801474 T7+ |
AC073594 | D12S325 |
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12q13.2b~13.2c |
RP11-681G7 |
chr12 53Mb | |
AQ610367 T7+,
AQ518287 SP6 |
AC025570 | D12S1724 |
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12q13.2c~13.3a |
RP11-973D8 |
chr12 54Mb | |
AQ606971 T7+,
AQ714003 SP6+ |
AC025162 | D12S1978 |
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12q13.3a |
RP11-183H16 |
chr12 54Mb | | |
AC023500 | SHGC-33516 |
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12q13.3a~13.3b |
RP11-799O6 |
chr12 55Mb | |
AQ515592 SP6+,
AQ523007 T7+ |
AC023499 | D12S1644 |
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12q14.1b |
RP11-557F20 |
chr12 57Mb | | |
AC068305 | D12S355 |
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12q14.1d |
RP11-631N16 |
chr12 61Mb | |
AQ407942 T7,
AQ442972 SP6 |
AC048341 | D12S329 |
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12q14.1d~14.2a |
RP11-1022B3 |
chr12 61Mb | |
AQ821793 SP6+ |
AC026116 | WI-1079 |
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12q14.2 |
RP11-596J18 |
chr12 63Mb | |
CL423300 SP6,
CL423305 T7 |
AC022510 | AFMA108WE1 |
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12q14.3c |
RP11-512G13 |
chr12 65Mb | |
CL423333 SP6,
CL423338 T7 |
AC012518 | D12S868 |
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12q15b~15c |
RP11-1143G9 |
chr12 67Mb | |
AQ699365 SP6,
AZ124178 |
AC020656 | D12S1417 |
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12q15c |
RP11-1022D13 |
chr12 68Mb | |
CL423268 SP6,
CL423273 T7 |
AC016153 | WI-17013 |
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12q15d |
RP11-1007B5 |
chr12 69Mb | | |
AC015544 | AFMA082ZB5 |
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12q15d~21.1a |
RP11-691B3 |
chr12 70Mb | | |
AC012018 | WI-13774 |
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12q21.1c |
RP11-255I14 |
chr12 73Mb | | |
AC021648 | G64768 |
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12q21.2 |
RP11-148D15 |
chr12 76Mb | |
AQ375656 SP6,
AQ375658 T7 |
AC073652 | |
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12q21.2~21.31 |
RP11-530C5 |
chr12 78Mb | | |
AC073569 | WI-16785 |
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12q21.31a |
RP11-127J23 |
chr12 79Mb | | |
AC068798 | D12S1297 |
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12q21.31b~21.31c |
RP11-362A1 |
chr12 80Mb | | |
AC011602 | D12S1708 |
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12q21.32 |
RP11-900F13 |
chr12 87Mb | | |
AC024941 | D12S1453 |
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12q21.33~22 |
RP11-833E18 |
chr12 91Mb | |
AQ568258 SP6+,
AQ524143 T7 |
AC023280 | D12S1345 |
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12q21.33b |
RP11-734K2 |
chr12 88Mb | |
CL423196 SP6,
CL423201 T7 |
AC025034 | WI-3187 |
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12q21.33c |
RP11-753N8 |
chr12 89Mb | |
AQ494694 T7,
AQ619399 SP6 |
AC026307 | D12S316 |
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12q21.33c~21.33d |
RP11-917O5 |
chr12 89Mb | |
AQ563004 T7,
CL423235 T7,
CL423231 SP6 | | WI-20146 |
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12q21.33d |
RP11-837P6 |
chr12 91Mb | |
AQ808347 T7+,
AQ818398 SP6+ |
AC012514 | |
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12q22a |
RP11-850P15 |
chr12 92Mb | |
AZ124203 |
AC025261 | D12S1346 |
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12q23.1a |
RP11-510I5 |
chr12 95Mb | | |
AC007513 | D12S1716 |
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12q23.1a~23.1b |
RP11-541G9 |
chr12 96Mb | | |
AC007437 | D12S1657 |
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12q23.1b~23.1c |
RP11-690J15 |
chr12 96Mb | |
AQ438604 SP6,
AQ440704 T7 |
AC007297 | D12S1671 |
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12q23.1d |
RP11-426H24 |
chr12 99Mb | |
AQ553333 SP6+,
AQ553336 T7 |
AC023056 |
D12S1032+ |
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12q23.1d~23.2a |
RP11-210L7 |
chr12 101Mb | | |
AC010202 | D12S318 |
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12q23.2a |
RP11-438H24 |
chr12 101Mb | | |
AC026108 | |
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12q23.2~23.3 |
RP11-205I24 |
chr12 102Mb | |
AQ419902 T7,
AQ419901 SP6 |
AC010190 | D12S360,
RH52553 |
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12q23.3a |
RP11-443B14 |
chr12 103Mb | | |
AC010191 | D12S1647 |
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12q23.3b~23.3c |
RP11-482D24 |
chr12 105Mb | |
AQ631392 T7 |
AC079385 | D12S1342 |
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12q23.3c |
RP11-90N16 |
chr12 106Mb | | |
AC007649 | AFMA205YG9 |
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12q23.3d |
RP11-951I11 |
chr12 107Mb | |
AQ816755 SP6 |
AC008119 | D12S1637 |
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12q24.11b |
RP11-608E13 |
chr12 108Mb | | |
AC007623 | D12S1645 |
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12q24.13a~24.13b |
RP11-100B17 |
chr12 111Mb | |
AQ344652 SP6,
AQ322374 T7 |
AC078924 | |
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12q24.13b |
RP11-438N16 |
chr12 112Mb | | |
AC009731 | WI-18271 |
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12q24.13b~24.21a |
RP11-333I15 |
chr12 113Mb | |
CL423203 SP6,
CL423207 T7 |
AC009776 | D12S1646 |
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12q24.21b |
RP11-25E2 |
chr12 113Mb | |
B84510 SP6 |
AC008125 | D12S369,
SHGC-2158 |
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12q24.21b~24.21c |
RP11-212D14 |
chr12 114Mb | | |
AC010179 | D12S79 |
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12q24.21c |
RP11-101P14 |
chr12 115Mb | |
AQ322314 SP6,
AQ322317 T7 |
AC060226 | D12S817 |
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12q24.22b |
RP11-183N5 |
chr12 116Mb | |
AQ419059 T7 |
AC025126+,
AC026364 | SHGC-20788,
WI-21497 |
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12q24.23a |
RP11-110J12 |
chr12 116Mb | |
AQ320108 SP6 |
AC027291 | D12S1720 |
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12q24.23a~24.23b |
RP11-131H7 |
chr12 117Mb | |
CL423236 SP6,
CL423239 T7 |
AC026332 | D12S86,
SHGC-20790 |
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12q24.23~24.31 |
RP11-665J20 |
chr12 119Mb | |
CL423267 SP6,
CL423272 T7 |
AC069214 | WI-16745 |
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12q24.31b |
RP11-87C12 |
chr12 120Mb | | |
AC069503 | D12S1349 |
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12q24.31b~24.31c |
RP11-512M8 |
chr12 121Mb | | |
AC048338 | RH18982,
WI-6239 |
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12q24.31d |
RP11-486O12 |
chr12 122Mb | |
AQ630579 T7,
AZ124092,
CL423304 T7,
CL423299 SP6 |
AC055713 | WI-15890 |
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12q24.31e~24.31f |
RP11-380L11 |
chr12 122Mb | | |
AC079315 | D12S837 |
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12q24.32a |
RP11-507I5 |
chr12 124Mb | |
CL423337 T7,
CL423332 SP6 | |
D12S837+ |
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12q24.32b |
RP11-205M16 |
chr12 125Mb | |
AQ419920 T7+ |
AC020640 | |
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12q24.32b~24.32c |
RP11-526P6 |
chr12 126Mb | | |
AC025160 | D12S1675 |
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12q24.32c |
RP11-553M19 |
chr12 127Mb | |
CL423195 SP6,
CL423200 T7 | |
D12S1697+ |
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12q24.32c~24.33a |
RP11-112B19 |
chr12 129Mb | |
AQ343200 T7+,
AQ312982 SP6 |
AC026764 | D12S343,
SHGC-2137 |
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12q24.33c |
RP11-394D10 |
chr12 132Mb | |
CL423234 T7,
CL423230 SP6 | | G64709 |
1 FISH-mapped clone was placed on the sequenced
genome based on BAC-ends, insert sequences and STSs.
2 Sequences that are associated with the clone
and used for clone placement.
* indicates
sequences that disagree with data in 'Placement on genome' column.
+ indicates sequences that didn't align to the
genome or were not used for annotation.
3 Placement summary indicates sequences
used for clone placement.
BAC-end sequence aligned in the plus orientation
 BAC-end sequence aligned in the minus orientation
insert sequence
STS aligned
insert sequence has clone end information.
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