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Software Installed on DaVinci

NERSC staff are actively building and installing software tools and applications on DaVinci. Please contact consult@nersc.gov if a particular piece of desired software is not found.

DaVinci Software List

The following table lists software installed on NERSC's SGI Altrix 350 server, DaVinci. Software is available through the modules software management system where a module name is given.

Click on the link called "NERSC" for information about using the software at NERSC. "???" in the Version column means that the software is not yet installed on DaVinci.

DaVinci Operating System Software

PackagePlatformVersionModule Docs
Linux davinci Enterprise Server 9 not needed NERSC; Vendor
PBS Pro davinci 7.0.0 pbs  Vendor
(*) Denotes limited support

DaVinci Parallel Programming Libraries

PackagePlatformVersionModule Docs
MPI davinci 1.11.1 not needed NERSC; Vendor
(*) Denotes limited support

Compilers/Languages

PackagePlatformVersionModule Docs
as davinci 2.15.90.0.1.1 none  Vendor
gcc davinci 3.3.3 not needed NERSC; Vendor
icc davinci 8.1 intel  Vendor
icpc davinci 8.1 intel  Vendor
ifort davinci 8.1 intel  Vendor
(*) Denotes limited support

Mathematical Libraries

Intel provides a highly optimized library of BLAS, LAPACK and FFT routines, the Intel Math Kernel Library (MKL) which is described at the Intel MKL Reference Manual. This library is installed on DaVinci and can be used with both the Intel and GNU compilers. To use it with the Intel compilers or GNU compilers, load the mkl module, and compile and link with the $MKL flag.

PackagePlatformVersionModule Docs
fftw davinci 3.1.2 fftw/3.1.2 NERSC; Vendor
MKL davinci 7.2.1 mkl  Vendor
udunits davinci 1.12.4 udunits  Vendor
(*) Denotes limited support

I/O Libraries

PackagePlatformVersionModule Docs
cdo davinci 1.0.9 cdo NERSC; Vendor
hdf davinci 4.2r1 hdf NERSC; Vendor
hdf5 davinci Parallel 1.6.4 hdf5_par NERSC; Vendor
hdf5 davinci Serial 1.6.4 hdf5 NERSC; Vendor
nccmp davinci 0.5.1 nccmp NERSC; Vendor
nccmp davinci 0.5.1 nccmp NERSC; Vendor
nccmp davinci 0.5.2 nccmp NERSC; Vendor
nco davinci 3.0.2 nco/3.0.2 NERSC; Vendor
nco davinci 3.9.1 nco NERSC; Vendor
ncview davinci 1.93a ncview NERSC; Vendor
netcdf davinci 3.6.0 netcdf/3.6.0 NERSC; Vendor
netcdf davinci 3.6.2 netcdf NERSC; Vendor
(*) Denotes limited support

Visualization Libraries

PackagePlatformVersionModule Docs
ncar davinci 4.4.0 ncar/4.4.0 NERSC; Vendor
ncar davinci 4.4.2 ncar NERSC; Vendor
ncar davinci 5.0.0 ncar/5.0.0 NERSC; Vendor
ncar davinci Double precision 4.3.1 ncar_dp NERSC; Vendor
(*) Denotes limited support

Code Debugging Tools

PackagePlatformVersionModule Docs
gdb davinci 6.3 none  Vendor
idb davinci 8.1-11 intel  Vendor
(*) Denotes limited support

Applications: Visualization

PackagePlatformVersionModule Docs
avs davinci 5.5 avs NERSC; Vendor
avs-express davinci 7.0 avs-express/7.0 NERSC; Vendor
avs-express davinci 7.1 avs-express/7.1 NERSC; Vendor
avs-express davinci 7.2 avs-express NERSC; Vendor
ensight davinci 8.0.4a ensight/8.0.4a NERSC; Vendor
ensight davinci 8.0.5a ensight/8.0.5a NERSC; Vendor
ensight davinci 8.0.6a ensight/8.0.6a NERSC; Vendor
ensight davinci 8.0.7g ensight/8.0.7g NERSC; Vendor
ensight davinci 8.2 ensight/8.2 NERSC; Vendor
ensight davinci 8.2.4a ensight NERSC; Vendor
ferret davinci 6.01* ferret NERSC; Vendor
ferret davinci 6.08* ferret NERSC; Vendor
gimp davinci 2.0 gimp NERSC; Vendor
gnuplot davinci 4.1 not needed NERSC; Vendor
grace davinci 5.1.19 grace NERSC; Vendor
grads davinci 1.9b4* grads  Vendor
idl davinci 6.1 idl/6.1 NERSC; Vendor
idl davinci 6.2 idl/6.2 NERSC; Vendor
idl davinci 6.3 idl/6.3 NERSC; Vendor
idl davinci 6.4 idl NERSC; Vendor
ImageJ davinci 1.41* imagej  Vendor
imagemagick davinci 5.5.7 not needed NERSC; Vendor
paraview davinci 2.0.2 paraview NERSC; Vendor
paraview davinci 2.5 paraview/2.5 NERSC; Vendor
paraview_mpi davinci 2.0.2 paraview/2.0.2_mpi NERSC; Vendor
paraview_mpi davinci 2.5 paraview/2.5_mpi NERSC; Vendor
rasmol davinci 2.7.2.1.1 rasmol NERSC; Vendor
tecplot davinci 360_2008 tecplot/360_2008  Vendor
visit davinci 1.10.0 visit NERSC; Vendor
visit davinci 1.11.1 visit NERSC; Vendor
visit davinci 1.7 visit NERSC; Vendor
visit davinci 1.8.0 visit NERSC; Vendor
visit davinci 1.9.0 visit NERSC; Vendor
vmd davinci 1.8.3 vmd NERSC; Vendor
(*) Denotes limited support

Applications: Mathematics

PackagePlatformVersionModule Docs
mathematica davinci 5.2 mathematica NERSC; Vendor
matlab davinci 7.1.0.R14 matlab/7.1.0.R14 NERSC; Vendor
matlab davinci R2006a matlab NERSC; Vendor
R davinci 2.7.1* R  Vendor
(*) Denotes limited support

General Programming Tools and Utilities

PackagePlatformVersionModule Docs
cvs davinci 1.11.14 none NERSC; Vendor
GNU davinci 1.0 GNU NERSC; Vendor
modules davinci 3.1.6 not needed NERSC; Vendor
perl davinci 5.8.3 not needed NERSC; Vendor
python davinci 2.3.3 not needed NERSC; Vendor
(*) Denotes limited support
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