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CCAP BAC Clones

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Chromosome Y


Map Coordinate BAC id Placement on genome1 Placement summary3 BAC End2 Insert Sequence2 STS id2
Yp11.31b~11.31a RP11-115H13 chrY 6Mb AQ346422 T7,
AQ346419 SP6
AC011297 DYS266
Yp11.2j~11.2h RP11-375P13 chrY 8Mb CL423246 SP6,
CL423248 T7,
AQ533959 T7
AC064829 
Yq11.223d~11.223e RP11-214M24 chrY 25Mb CL423213 SP6,
CL423215 T7
AC025735* 
Yq11.223d~11.223e RP11-214M24 chrY 25Mb CL423215 T7,
CL423213 SP6
AC025735 

1 FISH-mapped clone was placed on the sequenced genome based on BAC-ends, insert sequences and STSs.

2 Sequences that are associated with the clone and used for clone placement.
   * indicates sequences that disagree with data in 'Placement on genome' column.
   + indicates sequences that didn't align to the genome or were not used for annotation.

3 Placement summary indicates sequences used for clone placement.
   BAC-end sequence aligned in the plus orientation
   BAC-end sequence aligned in the minus orientation
   insert sequence
   STS aligned
   insert sequence has clone end information.


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