Journal Publications, 2009
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July
Journal of Virology
T- cell vaccination reduces SIV in semen.
Whitney JB, Luedemann C, Hraber P, Rao SS, Mascola JR, Nabel GJ, Letvin NL.
J Virol. 2009 Jul 29.
Journal of Virology
The Size of the Viral Inoculum Contributes to the Outcome of Hepatitis B Virus Infection.
Asabe S, Wieland SF, Chattopadhyay PK, Roederer M, Engle RE, Purcell RH, Chisari FV.
J Virol. 2009 Jul 22.
Journal of Immunology
Different Vaccine Vectors Delivering the Same Antigen Elicit CD8+ T Cell Responses with Distinct Clonotype and Epitope Specificity.
Honda M, Wang R, Kong WP, Kanekiyo M, Akahata W, Xu L, Matsuo K, Natarajan K, Robinson H, Asher TE, Price DA, Douek DC, Margulies DH, Nabel GJ.
J Immunol. 2009 Jul 20.
New England Journal of Medicine
Protecting against future shock--inhalational anthrax.
Nabel GJ
N Engl J Med. 2009 Jul 9;361(2):191-3.
Mucosal Immunology
alpha4(+)beta7(hi)CD4(+) memory T cells harbor most Th-17 cells and are preferentially infected during acute SIV infection.
Kader M, Wang X, Piatak M, Lifson J, Roederer M, Veazey R, Mattapallil JJ.
Mucosal Immunol. 2009 Jul 1
June
Nature- Medicine
HIV reservoir size and persistence are driven by T cell survival and homeostatic proliferation.
Chomont N, El-Far M, Ancuta P, Trautmann L, Procopio FA, Yassine-Diab B, Boucher G, Boulassel MR, Ghattas G, Brenchley JM, Schacker TW, Hill BJ, Douek DC, Routy JP, Haddad EK, Sékaly RP.
Nat Med. 2009 Jun 21.
Journal of Immunology
Differential association of programmed death-1 and CD57 with ex vivo survival of CD8+ T cells in HIV infection.
Petrovas C, Chaon B, Ambrozak DR, Price DA, Melenhorst JJ, Hill BJ, Geldmacher C, Casazza JP, Chattopadhyay PK, Roederer M, Douek DC, Mueller YM, Jacobson JM, Kulkarni V, Felber BK, Pavlakis GN, Katsikis PD, Koup RA.
J Immunol. 2009 Jul 15;183(2):1120-32. Epub 2009 Jun 29.
Journal of Virology
Antibody specificities associated with neutralization breadth in plasma from HIV-1 subtype C infected blood donors.
Gray ES, Taylor N, Wycuff D, Moore PL, Tomaras GD, Wibmer CK, Puren A, Decamp A, Gilbert PB, Wood B, Montefiori DC, Binley JM, Shaw GM, Haynes BF, Mascola JR, Morris L.
J Virol. 2009 Jun 24.
AIDS 2009
Monitoring HIV vaccine trial participants for primary infection: studies in the SIV/macaque model.
Whitney JB, Luedemann C, Bao S, Miura A, Rao SS, Mascola JR, Letvin NL.
AIDS. 2009 Jun 20.
Blood
Minor viral and host genetic polymorphisms can dramatically impact the biological outcome of an epitope-specific CD8 T cell response.
Geldmacher C, Metzler IS, Tovanabutra S, Asher TE, Gostick E, Ambrozak DR, Petrovas C, Schuetz A, Ngwenyama N, Kijak G, Maboko L, Hoelscher M, McCutchan F, Price DA, Douek DC, Koup RA.
Blood. 2009 Jun 19.
Journal of Virology
Transitions to and from the CD4-bound Conformation are Modulated by a Single-Residue Change in the HIV-1 gp120 Inner Domain.
Kassa A, Madani N, Schön A, Haim H, Finzi A, Xiang SH, Wang L, Princiotto A, Pancera M, Courter J, Smith A 3rd, Freire E, Kwong PD, Sodroski J.
J Virol. 2009 Jun 17.
Archives of Virology
Characterization of SARS-CoV-specific memory T cells from recovered individuals 4 years after infection.
Fan YY, Huang ZT, Li L, Wu MH, Yu T, Koup RA, Bailer RT, Wu CY.
Arch Virol. 2009;154(7):1093-9. Epub 2009 Jun 13.
Immunology and Cell Biology
Extraction and characterization of the rhesus macaque T-cell receptor beta-chain genes.
Greenaway HY, Kurniawan M, Price DA, Douek DC, Davenport MP, Venturi V.
Immunol Cell Biol. 2009 Jun 9.
Journal of Immunology
Tuberculosis subunit vaccination provides long-term protective immunity characterized by multifunctional CD4 memory T cells.
Lindenstrøm T, Agger EM, Korsholm KS, Darrah PA, Aagaard C, Seder RA, Rosenkrands I, Andersen P.
J Immunol. 2009 Jun 15;182(12):8047-55.
New England Journal of Medicine
An autoinflammatory disease with deficiency of the interleukin-1-receptor antagonist.
Aksentijevich I, Masters SL, Ferguson PJ, Dancey P, Frenkel J, van Royen-Kerkhoff A, Laxer R, Tedgård U, Cowen EW, Pham TH, Booty M, Estes JD, Sandler NG, Plass N, Stone DL, Turner ML, Hill S, Butman JA, Schneider R, Babyn P, El-Shanti HI, Pope E, Barron K, Bing X, Laurence A, Lee CC, Chapelle D, Clarke GI, Ohson K, Nicholson M, Gadina M, Yang B, Korman BD, Gregersen PK, van Hagen PM, Hak AE, Huizing M, Rahman P, Douek DC, Remmers EF, Kastner DL, Goldbach-Mansky R.
N Engl J Med. 2009 Jun 4;360(23):2426-37.
Expert Review of Vaccines
Flow cytometry and the future of vaccine development.
Bolton DL, Roederer M.
Expert Rev Vaccines. 2009 Jun;8(6):779-89. Review.
Nature Immunology
HIV-1 and influenza antibodies: seeing antigens in new ways.
Kwong PD, Wilson IA.
Nat Immunol. 2009 Jun;10(6):573-8. Review.
Journal of Infectious Diseases
Evidence for translocation of microbial products in patients with idiopathic CD4 lymphocytopenia.
Lee PI, Ciccone EJ, Read SW, Asher A, Pitts R, Douek DC, Brenchley JM, Sereti I.
J Infect Dis. 2009 Jun 1;199(11):1664-70.
Journal of Infectious Diseases
Evaluation of the pathogenesis of decreasing CD4(+) T cell counts in human immunodeficiency virus type 1-infected patients receiving successfully suppressive antiretroviral therapy.
Nies-Kraske E, Schacker TW, Condoluci D, Orenstein J, Brenchley J, Fox C, Daucher M, Dewar R, Urban E, Hill B, Guenaga J, Hoover S, Maldarelli F, Hallahan CW, Horn J, Kottilil S, Chun TW, Folino M, Palmer S, Wiegand A, O'Shea MA, Metcalf JA, Douek DC, Coffin J, Haase A, Fauci AS, Dybul M.
J Infect Dis. 2009 Jun 1;199(11):1648-56.
Blood
Antigen sensitivity is a major determinant of CD8+ T-cell polyfunctionality and HIV-suppressive activity.
Almeida JR, Sauce D, Price DA, Papagno L, Shin SY, Moris A, Larsen M, Pancino G, Douek DC, Autran B, Sáez-Cirión A, Appay V.
Blood. 2009 Jun 18;113(25):6351-60.
Journal of Virology
Replication-defective adenovirus vectors with multiple deletions do not induce measurable vector-specific T cells in human trials.
Koup RA, Lamoreaux L, Zarkowsky D, Bailer RT, King CR, Gall JG, Brough DE, Graham BS, Roederer M.
J Virol. 2009 Jun;83(12):6318-22.
May
Public Library of Science-Pathogens
Structure-based stabilization of HIV-1 gp120 enhances humoral immune responses to the induced co-receptor binding site.
Dey B, Svehla K, Xu L, Wycuff D, Zhou T, Voss G, Phogat A, Chakrabarti BK, Li Y, Shaw G, Kwong PD, Nabel GJ, Mascola JR, Wyatt RT.
PLoS Pathog. 2009 May;5(5):e1000445.
Vaccine
TLR9 agonist, but not TLR7/8, functions as an adjuvant to diminish FI-RSV vaccine-enhanced disease, while either agonist used as therapy during primary RSV infection increases disease severity.
Johnson TR, Rao S, Seder RA, Chen M, Graham BS.
Vaccine. 2009 May 18;27(23):3045-52.
Journal of Virology
Delivery of adenovirus HIV vaccine vectors to the intestine induces enhanced mucosal cellular immunity.
Wang L, Cheng C, Ko SY, Kong WP, Kanekiyo M, Einfeld D, Schwartz RM, King CR, Gall JG, Nabel GJ.
J Virol. 2009 May 6.
Proceedings of the national Academy of Sciences
High frequencies of resting CD4+ T cells containing integrated viral DNA are found in rhesus macaques during acute lentivirus infections.
Nishimura Y, Sadjadpour R, Mattapallil JJ, Igarashi T, Lee W, Buckler-White A, Roederer M, Chun TW, Martin MA.
Proc Natl Acad Sci U S A. 2009 May 12;106(19):8015-20.
Journal of Experimental Medicine
Low-dose rectal inoculation of rhesus macaques by SIVsmE660 or SIVmac251 recapitulates human mucosal infection by HIV-1.
Keele BF, Li H, Learn GH, Hraber P, Giorgi EE, Grayson T, Sun C, Chen Y, Yeh WW, Letvin NL, Mascola JR, Nabel GJ, Haynes BF, Bhattacharya T, Perelson AS, Korber BT, Hahn BH, Shaw GM.
J Exp Med. 2009 May 11;206(5):1117-34.
Nature Review- Microbiology
Correlates of protective immunity for Ebola vaccines: implications for regulatory approval by the animal rule.
Sullivan NJ, Martin JE, Graham BS, Nabel GJ.
Nat Rev Microbiol. 2009 May;7(5):393-400. Review.
Virology
High titer HIV-1 V3-specific antibodies with broad reactivity but low neutralizing potency in acute infection and following vaccination.
Davis KL, Gray ES, Moore PL, Decker JM, Salomon A, Montefiori DC, Graham BS, Keefer MC, Pinter A, Morris L, Hahn BH, Shaw GM.
Virology. 2009 May 10;387(2):414-26.
Clinical Vaccine Immunology
Evidence of prior exposure to human bocavirus as determined by a retrospective serological study of 404 serum samples from adults in the United States.
Cecchini S, Negrete A, Virag T, Graham BS, Cohen JI, Kotin RM.
Clin Vaccine Immunol. 2009 May;16(5):597-604.
April
Journal of Virology
Multiply-deleted replication-defective adenovirus vectors do not induce measurable vector-specific T cells in human trials.
Koup RA, Lamoreaux L, Zarkowsky D, Bailer RT, King CR, Gall JG, Brough DE, Graham BS, Roederer M.
J Virol. 2009 Apr 1.
Blood
Antigen sensitivity is a major determinant of CD8+ T-cell polyfunctionality and HIV suppressive activity.
Almeida JR, Sauce D, Price DA, Papagno L, Shin SY, Moris A, Larsen M, Pancino G, Douek DC, Autran B, Saez-Cirion A, Appay V.
Blood. 2009 Apr 23.
Journal of Experimental Medicine
Public clonotype usage identifies protective Gag-specific CD8+ T cell responses in SIV infection.
Price DA, Asher TE, Wilson NA, Nason MC, Brenchley JM, Metzler IS, Venturi V, Gostick E, Chattopadhyay PK, Roederer M, Davenport MP, Watkins DI, Douek DC.
J Exp Med. 2009 Apr 13;206(4):923-36.
Journal of Immunology
Association of HIV-specific and total CD8+ T memory phenotypes in subtype C HIV-1 infection with viral set point.
Burgers WA, Riou C, Mlotshwa M, Maenetje P, de Assis Rosa D, Brenchley J, Mlisana K, Douek DC, Koup R, Roederer M, de Bruyn G, Karim SA, Williamson C, Gray CM; and the CAPRISA 002 Acute Infection Study Team.
J Immunol. 2009 Apr 15;182(8):4751-61.
Journal of Infectious Diseases
Plasma levels of bacterial DNA correlate with immune activation and the magnitude of immune restoration in persons with antiretroviral-Treated HIV infection.
Jiang W, Lederman MM, Hunt P, Sieg SF, Haley K, Rodriguez B, Landay A, Martin J, Sinclair E, Asher AI, Deeks SG, Douek DC, Brenchley JM.
J Infect Dis. 2009 Apr 15;199(8):1177-85.
Journal of Immunological Methods
A method for identification of HIV gp140 binding memory B cells in human blood.
Scheid JF, Mouquet H, Feldhahn N, Walker BD, Pereyra F, Cutrell E, Seaman MS, Mascola JR, Wyatt RT, Wardemann H, Nussenzweig MC.
J Immunol Methods. 2009 Apr 15;343(2):65-7.
March
Journal of Virology
Expanded breadth of the T-cell response to mosaic human immunodeficiency virus type 1 envelope DNA vaccination.
Kong WP, Wu L, Wallstrom TC, Fischer W, Yang ZY, Ko SY, Letvin NL, Haynes BF, Hahn BH, Korber B, Nabel GJ.
J Virol. 2009 Mar;83(5):2201-15.
Blood
High avidity myeloid leukemia-associated antigen-specific CD8+ T cells preferentially reside in the bone marrow.
Melenhorst JJ, Scheinberg P, Chattopadhyay PK, Gostick E, Ladell K, Roederer M, Hensel NF, Douek DC, Barrett AJ, Price DA.
Blood. 2009 Mar 5;113(10):2238-44.
Journal of Virology
Characterization of Respiratory Syncytial Virus M- and M2-Specific CD4 T Cells in a Murine Model.
Liu J, Ruckwardt TJ, Chen M, Johnson TR, Graham BS.
J Virol. 2009 Mar 4.
Journal of Virology
Enhanced Exposure of the CD4-Binding Site to Neutralizing Antibodies by Structural Design of a Membrane-Anchored HIV-1 gp120 Domain.
Wu L, Zhou T, Yang ZY, Svehla K, O'Dell S, Louder M, Xu L, Mascola JR, Burton DR, Hoxie J, Doms R, Kwong PD, Nabel GJ.
J Virol. 2009 Mar 4.
Journal of General Virology
Adenovirus Serotype 5 Infects Human Dendritic Cells via a CAR-Independent Receptor Pathway Mediated by Lactoferrin and DC-SIGN.
Adams WC, Bond E, Havenga MJ, Holterman L, Goudsmit J, Karlsson-Hedestam GB, Koup RA, Loré K.
J Gen Virol. 2009 Mar 12. [Epub ahead of print]
Nature
Broad diversity of neutralizing antibodies isolated from memory B cells in HIV-infected individuals.
Scheid JF, Mouquet H, Feldhahn N, Seaman MS, Velinzon K, Pietzsch J, Ott RG, Anthony RM, Zebroski H, Hurley A, Phogat A, Chakrabarti B, Li Y, Connors M, Pereyra F, Walker BD, Wardemann H, Ho D, Wyatt RT, Mascola JR, Ravetch JV, Nussenzweig MC.
Nature. 2009 Mar 15. [Epub ahead of print]
Virology
High titer HIV-1 V3-specific antibodies with broad reactivity but low neutralizing potency in acute infection and following vaccination.
Davis KL, Gray ES, Moore PL, Decker JM, Salomon A, Montefiori DC, Graham BS, Keefer MC, Pinter A, Morris L, Hahn BH, Shaw GM.
Virology. 2009 Mar 17 (epub).
February
Journal of Immunology
Increased IL-15 production is associated with higher susceptibility of memory CD4 T cells to simian immunodeficiency virus during acute infection.
Eberly MD, Kader M, Hassan W, Rogers KA, Zhou J, Mueller YM, Mattapallil MJ, Piatak M Jr, Lifson JD, Katsikis PD, Roederer M, Villinger F, Mattapallil JJ.
J Immunol. 2009 Feb 1;182(3):1439-48.
January
Journal of Virology
Regulatory T Cells Promote Early Influx of CD8+ T Cells in Lungs of Respiratory Syncytial Virus-Infected Mice and Diminish Immunodominance Disparities.
Ruckwardt TJ, Bonaparte KL, Nason MC, Graham BS.
J Virol.. 2009 Jan 19.
Journal of Virology
Partial protection of SIV-infected rhesus monkeys against superinfection with a heterologous SIV isolate.
Yeh WW, Jaru-Ampornpan P, Nevidomskyte D, Asmal M, Rao SS, Buzby AP, Montefiori DC, Korber BT, Letvin NL.
J Virol. 2009 Jan 7.
Journal of Leukocyte Biology
The cytolytic enzymes granyzme A, granzyme B, and perforin: expression patterns, cell distribution, and their relationship to cell maturity and bright CD57 expression.
Chattopadhyay PK, Betts MR, Price DA, Gostick E, Horton H, Roederer M, De Rosa SC.
J Leukoc Biol. 2009 Jan;85(1):88-97.
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