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4.71.3  Unagreed, Delinquent and Substitute Form 5500 Examination Procedures

4.71.3.1  (07-01-2003)
Overview of Unagreed, Delinquent and Substitute Form 5500 Examinations

  1. Most qualification issues discovered on EP exams are resolved under the Employee Plans Compliance Resolution System (EPCRS). See IRM 7.2.2 for EPCRS guidelines.

  2. This section sets forth the guidelines and procedures to be followed when qualification issues cannot be resolved under EPCRS. These exams are herein referred to as unagreed Form 5500 exams.

  3. The guidelines and procedures in IRM 4.71.1 should be followed in conducting Form 5500 examinations up to the point the case becomes unagreed. This section covers the processing of a case from the time it becomes unagreed until it is closed.

  4. This section also provides guidelines and procedures for processing delinquent and substitute Forms 5500.

4.71.3.1.1  (07-01-2003)
Definitions

  1. An unagreed Form 5500 examination is one that involves a qualification issue that cannot be resolved through EPCRS.

  2. A delinquent return is a return that was not filed by the due date, including extensions thereof, and is subsequently filed by the entity.

  3. Asubstitute for return is used to establish an account for an entity that refuses to file or is unable to file a required return.

  4. The term revocation is used to refer to the disqualification of a plan that has a prior determination letter.

  5. The term non-qualification is used to refer to the disqualification of a plan that has no prior determination letter.

4.71.3.2  (07-01-2003)
Addressing Issues that Effect Plan Qualification

  1. When an issue is discovered on an examination of a plan that has the potential to disqualify the plan, the agent will discuss the issue with the group manager before formally advising the taxpayer that disqualification of the plan is being proposed. The purpose of this discussion is to confirm that the facts are being properly analyzed and to determine whether the issue can be resolved by utilizing an EPCRS correction program. The examiner should not proceed with a proposed revocation/non-qualification until it has been determined that the issue cannot be resolved through EPCRS or that the taxpayer has declined this option.

  2. Managerial involvement and guidance should be documented in the Case Chronology Record (CCR), Form 5464.

  3. The agent will also use the CCR or similar document to record in clear, legible form, a factual accounting of all conferences with the taxpayer/representative. Since the administrative record in declaratory judgment cases (which includes proposed revocation/non-qualification) consists only of the documentation that was submitted in writing and exchanged between the parties, all discussions and conferences must be formally recorded. If the agent wants pertinent portions of the CCR or similar documentation included in the administrative record it must be sent to the taxpayer/POA in letter format. The pertinent portions should include, but are not limited to any discussions with the taxpayer or representative that are relevant to the audit scope, affirmation of tax liability or the qualified status of the plan.

  4. After full development of the relevant issues, the agent will present proposals for resolution to the taxpayer/representative. This provides the taxpayer/representative an opportunity to agree with the agent's proposal(s), make appropriate modifications to resolve the issue(s), present additional facts for consideration, or present his/her position. Every effort should be made to resolve the issues at the lowest possible level. The taxpayer/representative will be advised that the additional facts will not be considered a part of the administrative record if such facts are not reduced to writing and provided to the Service.

  5. If the plan defect can be resolved through the Audit Closing Agreement Program (CAP) of EPCRS, the taxpayer will be offered the opportunity to enter into negotiations for a closing agreement. See IRM 7.2.1 and 7.2.2, and Rev. Proc. 2002-47 (as updated annually) for closing agreement procedures.

  6. The qualification issue(s) must be clearly explained to the taxpayer by the agent in writing through the issuance of a preliminary Revenue Agent’s Report (RAR) in a "facts/law/government position" format.

    1. This preliminary RAR should satisfy parts a through d of the final RAR (See IRM 4.71.3.3.3 below), but should be clearly notated as a " Draft" or "Preliminary" copy.

      Note:

      Mandatory Review will mail out the final RAR with the 30-Day Letter. (See IRM 4.71.3.3.2 below).

    2. The preliminary RAR is important for two reasons. First, it is written documentation that the specific issues were clearly discussed (with adequate authority given) with the taxpayer. Second, it places the document within the administrative record for declaratory judgment purposes.

    3. The agent should mail the preliminary RAR with an individually designed cover letter to the taxpayer and POA before the case is closed unagreed to Mandatory Review. The taxpayer should be given sufficient time to provide a response.

  7. Revocation/non-qualification of the plan will be proposed, and the case will be closed "unagreed" to Mandatory Review, if the qualification issue can not be resolved through EPCRS.

  8. Areas of Mandatory Technical Advice – Remember that certain issues such as violations of the exclusive benefit rule under IRC 401(a) (that fall under Title I of ERISA) and the proposed revocation/non-qualification of a collectively bargained plan are mandatory technical advice. See Rev. Proc. 2003-5 as updated annually for a complete list of issues requiring mandatory technical advice.

4.71.3.2.1  (07-01-2003)
Tax Effect of Plan Revocation/Non-Qualification

  1. The tax effect of revocation/non-qualification includes the following:

    1. Realized earnings in the trust are taxable each year the plan is not qualified (and the assessment of tax is not barred by statute). Trust earnings must be reported on Form 1041, which must be filed annually by the trustee.

    2. Per IRC 402(b)(4), if the plan is disqualified for failure to meet IRC 401(a)(26) or IRC 410(b), each HCE must include in income an amount equal to the employees’ entire vested accrued benefit not yet included in income. If the plan is disqualified for any other reason, plan contributions allocated to participant accounts for that year are taxable on the plan participant’s Form 1040 to the extent nonforfeitable.

    3. Plan contributions allocated to participant accounts are not deductible on the plan sponsor’s Form 1120 to the extent they are forfeitable.

    4. Distributions made from the plan are not eligible for rollover to another qualified plan or to an IRA, and therefore are taxable to the individual on their Form 1040 in the year of the distribution.

    5. Any funds received from an ineligible rollover distribution, which are retained in an IRA, maybe subject to excise tax on excess contributions under IRC 4973.

  2. The tax effect of the revocation/non-qualification should be computed for all open years, beginning with the year under audit and going forward. A copy of these calculations should be included in the case file with the RAR when the case is closed to Mandatory Review. Subject to managerial approval, prior years calculations will also be considered.

4.71.3.3  (07-01-2003)
Unagreed Form 5500 Procedures

  1. If the qualification issue is not resolved through a closing agreement (either the taxpayer does not qualify for Audit CAP or the taxpayer refuses to sign an agreement), the following actions should be taken:

    1. Forms 1041 will be solicited from the trustee. See IRM 4.71.3.3.1 below.

    2. At the discretion of the group manager, Form 1040 discrepancy adjustments will be initiated on all plan participants or at a minimum those individuals with substantial tax impact, dependent upon workload considerations. See the discrepancy adjustment procedures in IRM 4.71.4.

      Note:

      Before initiating a discrepancy adjustment, an AMDISA print should be secured to determine if a Form 1040 exam is already in process.

    3. At the discretion of the group manager, a Form 1120 discrepancy adjustment will be initiated on the plan sponsor in accordance with the discrepancy adjustment procedures in IRM 4.71.4. The agent may need to solicit the assistance of SB/SE to generate the Income Tax Adjustment, Form 4549-E.

      Note:

      Normally, the agent mails out the 30-Day Letter (Letter 2652) for 1040/1120 discrepancy adjustments. However, when a discrepancy adjustment is initiated in conjunction with a proposed revocation/non-qualification, the agent prepares the adjustment (Form 4549-E) and all reports, but Mandatory Review mails Letter 2652 (with Form 4549-E and attachments) to the taxpayer. The discrepancy adjustment file(s) will be worked simultaneously with the revocation/non-qualification and will continue to be part of the revocation/non-qualification package until the case is closed (either agreement is reached, the case is settled in Appeals or Tax Court, or tax is assessed).

    4. Timely referrals should be made on Forms 5666 to the applicable Exam Functional Units (LMSB, SB/SE or W&I) if the trustee does not file Forms 1041 and/or Forms 1040 or 1120 discrepancy adjustments are not initiated by the agent. See also IRM 4.71.4.2 for a list of examples of when a Form 1040/1120 referral is required in lieu of initiating a discrepancy adjustment. See IRM 4.71.6 for referral procedures.

    5. A Department of Labor referral should be made on Form 6212B and forwarded to EP Classification at the following address listed herein. The propriety of making a PBGC referral should also be considered. See IRM 4.71.6 for referral procedures.

    6. The 30-Day Letter package will be prepared in accordance with IRM 4.71.3.3.2.

    7. The final RAR will be prepared in accordance with IRM 4.71.3.3.3.

      Note:

      The preliminary RAR that the agent mailed to the taxpayer (as discussed in paragraph 6 of IRM 4.71.3.2 above) will be updated by the agent to include:


      •Any necessary clarification to parts a through d (the issue, the facts, the law, or the government position);
      •The taxpayers response, and;
      •The Service’s rebuttal of the taxpayer’s response.

    8. The administrative record will be prepared in accordance with IRM 4.71.3.3.4.

      Note:

      All cases subject to declaratory judgment (which includes unagreed Forms 5500 exams) will require the preparation of an administrative record.

    9. Form 5650 will be completed in accordance with IRM 4.71.3.6.

    10. The Unagreed Plan Disqualification Sheet (See Exhibit 4.71.3-1) must be completed before the case is closed and included on top on the inside, right hand side of the case file.

    11. The case will be closed to Mandatory Review.

    IRS

    EP Classification

    31 Hopkins Plaza

    Room 1550, Group 7693

    Baltimore, MD 21201

4.71.3.3.1  (07-01-2003)
Solicitation of Form 1041

  1. In the event that an examination results in the revocation/non-qualification of the exempt status of the trust and the issue could not be resolved under the closing agreement program (CAP), the trust becomes taxable and Forms 1041, U.S. Fiduciary Income Tax Return, are required to be filed for all open years.

    Note:

    Forms 1041 are filed on a calendar year basis. Assume that the plan year being examined is the year ending 6/30/2000 and that the plan is being disqualified for the 6/30/2000 plan year and all subsequent years. On 11/1/2002 Forms 1041 are solicited. Forms 1041 should be solicited for the tax year beginning 7/1/1999 and ending 12/31/1999, the tax year beginning 1/1/2000 and ending 12/31/2000, and the tax year beginning 1/1/2001 and ending 12/31/2001. See IRC 443(a). The SOL on the trust year runs with the filing of the Form 5500 for the plan year in which the trust year ends. An example is reflected at IRM 4.71.3.3.5. See IRC 443(b) for the required computation of taxable income for a taxable entity that is required to file a tax return for a short tax year.

  2. Solicit completed and signed Forms 1041 for open years.

    Note:

    Form 1041 cannot be filed using the EIN of the plan sponsor. The trust must obtain it’s own EIN. Form SS-4 is used to obtain an EIN.

  3. If solicited Forms 1041 are received:

    1. Enter on the top margin in bold face print "FORM 5500 CONVERTED TO FORM 1041 BY TEGE:EP" .

    2. Date stamp Form 1041 to establish the date actually filed.

    3. Attach Form 3198, Special Handling Notice, with the following completed:
      • Name: List the name of the trust;
      • Year: List the year of the attached Form 1041;
      • Special Instructions: Recommend the assessment or non-assessment of failure to pay and failure to file penalties. 1. 2. 3.

    4. Attach Form 13133, Expedite Processing Cycle, with the following completed:
      • List your name, phone number and mail code;
      • Select " Delinquent Return" ;
      • Select "See Form" 3198…1. 2. 3.

    5. If payment is received, prepare Form 3244-A, Payment Posting Voucher, for each Form 1041 received. Complete these items with comments as noted:
      • EIN;
      • Form number/MFT: Enter 1041/05;
      • Tax period;
      • Transaction date: Enter the date the payment was received;
      • Taxpayer name, date, address and zip code;
      • Transaction Data: List the entire amount received for the year under transaction code 610 (Remittance With Return) and the same amount under "Total payment" ;
      Remarks: List the check number and the amount of the check. If the payment is to be broken out over more than one year, list each year and the amount applied to each year. List the plan number .
      Prepared by: Enter the examiner’s name, group number and phone number.

    6. Make a copy of the Form 1041, Form 3198, Form 13133 and Form 3244-A (if applicable) for the case file.

    7. Prepare Form 3210, Document Transmittal:
      • List all Forms 1041 being forwarded;
      • If payment was received, list all check numbers and the amounts.

    8. Forward Forms 1041 by overnight mail to the Service Center for processing as follows:

    IF the taxpayer is located in... THEN use this address if you are enclosing a check or money order... THEN use this address if you are notenclosing a check or money order...
    Connecticut, Delaware, District of Columbia, Illinois, Indiana, Kentucky, Maine, Maryland, Massachusetts, Michigan, New Hampshire, New Jersey, New York, North Carolina, Ohio, Pennsylvania, Rhode Island, South Carolina, Vermont, Virginia, West Virginia, Wisconsin Internal Revenue Service Center
    Cincinnati, OH 45999-0148
    Internal Revenue Service Center
    Cincinnati, OH 45999-0048
    Alabama, Alaska, Arizona, Arkansas, California, Colorado, Florida, Georgia, Hawaii, Idaho, Iowa, Kansas, Louisiana, Minnesota, Mississippi, Missouri, Montana, Nebraska, Nevada, New Mexico, North Dakota, Oklahoma, Oregon, South Dakota, Tennessee, Texas, Utah, Washington, Wyoming Internal Revenue Service Center
    Ogden, UT
    84201-0148
    Internal Revenue Service Center
    Ogden, UT
    84201-0048
    A foreign country or a U.S. possession Internal Revenue Service Center
    Philadelphia, PA
    19255-0148
    Internal Revenue Service Center Philadelphia, PA 19255-0048

    Note:

    The receipt of a Form 1041 from the taxpayer makes the revocation/non-qualification an "agreed" revocation/non-qualification. However, the case must still be closed to Mandatory Review. The taxpayer must still be given the right to an Appeals hearing as well as their right to petition Tax Court. As far as the agent is concerned, the case is processed as though it were an "unagreed" revocation/non-qualification (except that it is not necessary to make a Form 1041 referral to SB/SE or LMSB). The agent must still prepare the 30-Day package (including the RAR) and the administrative record.

  4. If the trustee does not agree to complete and sign Form 1041, a referral (Form 5666) for Form 1041 must be prepared to SB/SE or LMSB (as applicable), since EP does not have examination jurisdiction over Forms 1041.

    1. The referral should be sent to EP Classification; however if SB/SE or LMSB is directly involved in the case, the referral should be made directly to SB/SE (or LMSB). If the referral is made direct to SB/SE (or LMSB) a copy of the referral should be sent to EP Classification. Effective March 31, 2003, the address for EP Classification is:

    2. A copy of the RAR should be attached to the referral (Form 5666) along with a rough calculation of Form 1041 tax due.

    3. Copies of all referral packages (Form 5666, the RAR and tax calculations) should be made for the case file and included as part of the workpapers.

      Note:

      Similar referrals should be made on Forms 1040 and 1120 if the agent does not do the discrepancy adjustments. These referrals should also include a copy of the RAR and an estimate of tax due.

    IRS – EP Classification

    TE/GE Division, 2nd Floor

    9350 Flair Drive

    El Monte, CA 91731-2885

  5. Forms 1041 should not be established on AIMS whether or not received from the taxpayer because EP does not have jurisdiction over Forms 1041. Time spent on the exam should be applied to Forms 5500 examined, or if discrepancy adjustments are initiated, to the discrepancy adjustment files.

4.71.3.3.2  (07-01-2003)
30-Day Letter Package

  1. The 30-Day Letter package for a proposed revocation/non-qualification consists of:

    1. Letter 1756 (for proposed revocation) or 1758 (for proposed non-qualification) ;

    2. Publication 1;

    3. Publication 594;

    4. Publication 1020;

    5. Notice 1214, and;

    6. Revenue Agent Report

  2. The applicable 30-Day Letter (Letter 1756 or 1758) and the Revenue Agent Report (RAR) are to be prepared by the agent. These are only to be mailed by Mandatory Review Staff after the case is reviewed. The agent will leave the contact information blank in the upper right of the letter. See Exhibit 4.71.3-3 for Letter 1756 and Exhibit 4.71.3-5 for Letter 1758.

  3. The agent will include both a paper and an electronic copy of the applicable 30-Day Letter and the RAR on a disk that is to be included in the case file when closed to Mandatory Review.

4.71.3.3.3  (07-01-2003)
Revenue Agent Report

  1. The qualification issue(s) should be fully explained in a Revenue Agent Report (RAR). Only items that are relevant to the issue(s) should be included in the RAR. The RAR should be broken down into the following components:

    1. Issues– Each separate issue will be clearly stated and numbered. For example, assume that during an examination it was determined that a plan did not comply with the top-heavy minimum contributions requirements, and did not make distributions to participants who separated from service in conformity with the top-heavy vesting schedule. Issue One would be "Whether minimum contributions per IRC 416(c)(2)(A) were made for a top-heavy plan for the plan year ending 12/31/2001." Issue Two would be "Whether the accelerated vesting provisions under IRC 416(b) were applied to all plan participants or former participants who received distributions during the plan year ending 12/31/2001."

    2. Facts– The facts section of the RAR will include a brief history of the plan and provide pertinent details surrounding the qualification issue(s). This section should also cite any plan provisions relevant to the issues raised. For the top-heavy issues stated above, the plan sections dealing with top-heavy contributions and accelerated vesting should be described. Examples of information that would be included (as applicable to the issues) are:
      • The plan years under examination
      • Type of business of the plan sponsor
      • Date business started/incorporated
      • Ownership of business sponsoring the plan
      • Type of tax return filed by the plan sponsor and the tax year end
      • Effective date of plan
      • Type of plan
      • Latest determination letter
      • Number of plan participants
      • Plan participants effected
      • Contributions made to the plan for the years under examination
      • Specific applicable plan sections, and
      • Other relevant case specific details.

    3. Law– The law section should contain a summary of Code sections, Revenue Rulings, court cases, etc., that relate to the issue(s) raised. Do not cite General Counsel Memos (GCM) or Private Letter Rulings (PLR) as sources of authority in the RAR.

    4. Analysis/Government's Position– The analysis section should discuss each issue separately and apply the law and the facts relevant to each specific issue. This section should also indicate the date on which the plan failed to qualify. An explanation of why EPCRS was not used must be provided. This section should be concluded by clearly stating the government’s position.

    5. Taxpayer's Position– This section should reflect the Taxpayer's position including any rebuttals the taxpayer has made regarding the Government's position. If the taxpayer has not provided a position on the issue(s) a simple statement to the effect that the taxpayer has not provided a response, is sufficient.

    6. Rebuttal/Conclusion– If the taxpayer provides a position on the issue(s), the RAR should contain a rebuttal to the taxpayer’s position. The Government’s position should be restated as a conclusion in all cases.

  2. Do not include Forms 1040, 1120, or 5330 information in the RAR for the revocation/non-qualification because they involve separate legal entities. If the agent works the Forms 1040 and/or 1120 discrepancy adjustment(s), separate RAR(s) and case files must be generated.

  3. The RAR must be copied on a disk and placed in the case file when closed to Mandatory Review. A hard copy should be placed in the case file.

4.71.3.3.4  (07-01-2003)
Administrative Record

  1. The administrative record is the written record of the administrative proceedings between the Service and the taxpayer in connection with a determination or examination. The administrative record will be used in Tax Court if the taxpayer files a petition to go to court. Generally, the Court will decide a declaratory judgment solely on the basis of the administrative record.

  2. The administrative record for examination cases must be prepared before the case is closed from the group for all unagreed cases. The original documents which belong with the administrative record will be organized in a separate binder as follows:

    1. The EP Administrative Record Index will be the first page. See Exhibit 4.71.3-5 for the proper format. The "Description of Document " portion of the index should contain a full description of the document, not just a form number or letter number. Agents will ensure that all protest and final adverse cases have an administrative record prepared and properly indexed.

    2. The index will be prepared in a manner such that the subsequent reviewer may readily find any document, workpaper, or correspondence contained in the file.

    3. All items that comprise the administrative record will be assembled in chronological order with the most recent one on top. Tabs in the administrative record should be affixed to the cover sheet corresponding to the items in the administrative record. The tabs should not be permanently affixed to the original documents.

    4. A separate hard copy administrative file case folder will be included with the examination case file for all "unagreed" and "agreed" revocations/non-qualification cases.

    5. The agent will reconstruct the administrative record to the extent possible from the taxpayer's records. The file will contain a copy of the plan and trust agreement for the period under examination and copies of all prior determination letters. The file will also contain any plan amendments made, subsequent to the period under examination. Additionally, any written correspondence (with attached documents) between the agent and the taxpayer/POA must also be included.

    6. In general, the administrative record does not include internal documents, such as interoffice memorandums, reviewer's memorandums, the agent's workpapers, the Case Chronology Record, or summaries of telephone conferences. Such internal documents should only be incorporated into the administrative record where the content/issue is specifically pertinent and has been shared in writing between the Service and the taxpayer.

  3. It is important to note on documents received from taxpayers when the document was received and who sent it. The official "received date" stamp can be used for this purpose.

  4. Pertinent information that was discussed orally between the agent and the plan sponsor or POA should be included in the administrative record if reduced to writing and exchanged with the plan sponsor or the POA.

  5. The agent will ensure that all attachments, which are referred to in the correspondence with the taxpayer, are included in the administrative record and are associated with the related document. The index should be saved on a disk and forwarded with the case file to Mandatory Review.

4.71.3.3.4.1  (07-01-2003)
Examples of Documents Included in the Administrative Record

  1. Copies of all pertinent information returns or tax returns.

  2. All letters and attachments exchanged with the plan sponsor by the EP Specialist relating to the current examination.

    Note:

    A no change advisory letter or other information provided to the plan sponsor during a prior examination, are not included in the administrative record until and unless exchanged during the course of the current audit Such information can also be exchanged between parties at a conference, but this fact should be memorialized in writing and mailed to such plan sponsor as part of the process of bolstering the administrative record.

  3. All letters and attachments received by mail from the plan sponsor by the agent relating to the current examination or application.

  4. A copy of the plan document, the trust document, plan amendments, and determination letters issued on the plan.

  5. A copy of the power of attorney for the plan sponsor submitted to the agent.

  6. Copies of employer payroll records provided to the EP Specialist by the plan sponsor if relevant to the qualification issue.
    Example: Payroll records may relate to the qualified status of the plan if an IRC 415 limit issue is involved in an examination. Payroll records are generally relevant in an examination case only.

  7. Copies of bank statements and cancelled checks provided to the specialist by the plan sponsor during an examination if relevant to the qualification issue.

  8. If in response to the agent’s questions concerning major qualification issues the plan sponsor's reply contains erroneous information, the agent should refute the misstatement in a formal, written response. Both letters may be included in the administrative record because the parties exchanged them and they affected a major qualification issue. Otherwise, disregard this information if it is not relevant to a form defect or an operational failure.

  9. If the plan sponsor submits a copy of an identical document to the EP Specialist by letter on several different occasions during the examination, it is only necessary that one of the copies of this document be includible in the administrative record.

  10. Taxpayer’s request for technical advice.

  11. Letters to the taxpayer from EP technical regarding technical advice and all responses from the taxpayer.

  12. The technical advice letter issued by EP Technical.

  13. The proposed revocation/non-qualification letter.

  14. Written protests.

  15. All Information Document Requests (IDRs), Form 4564, and responses to IDRs.

    Note:

    Incorrect computations, misinterpretations of law (IRC, Regulations, Revenue Rulings, etc.) or incorrect conclusions made in writing to the taxpayer should be clarified in subsequent correspondence. Any information that has been provided to the taxpayer becomes a part of the administrative record. To correct a mistake, the document should not be removed from the administrative record. Rather, the EP Specialist should admit a mistake has been made and submit a corrected statement or revised calculation to the taxpayer in writing.

4.71.3.3.5  (07-01-2003)
Statute Considerations

  1. When an agent is proposing revocation/non-qualification of a qualified plan, which would result in the conversion of a Form 5500 series return to a taxable return (Form 1041), the agent is responsible for controlling and protecting the statute until such time as:

    1. A Form 1041 is secured and the case is timely forwarded for closure within TE/GE, or

    2. The Form 1041 is timely referred to the appropriate Exam Functional Unit (SB/SE or LMSB) by the use of Form 5666, EP/EO Referral Information Report.

  2. Generally, the Schedule P attached to the Form 5500 begins the running of the statute of limitations (SOL) on the Form 1041 (See IRC 6501(a)). Schedule P is sufficient to begin the running of the statutory period if the following requirements are met:

    1. The trustee has signed the Schedule P, and

    2. The Schedule P has been filed with the Form 5500 series return.

  3. Although proper filing of the Schedule P guarantees the running of the SOL, the Form 5500 may be sufficient to start the running of the SOL if:

    1. A trustee signed a filed Form 5500 series return and is identified as such on the return, and

    2. There is sufficient data on the return to calculate the tax liability of the trust. See Martin Fireproofing Profit Sharing Plan & Trust v. Commissioner, 92 T.C. No. 77 (1989).

  4. Regardless of whether or not the trustee files a Schedule P, agents should secure extensions if they find indications that the trust is or will lose its qualified status.

  5. When securing a statute extension on the pension trust, Form 56, Notice Concerning Fiduciary Relationship, should also be sent to the trustee for completion. The completion of this Form helps to ensure that the person who will be signing the Form 872 is also the person who signs the Schedule P.

  6. In securing consents on Form 872 for a pension trust, the agent should make sure that the Form 872 indicates "TRUST NAME" rather than "CORPORATE NAME" and also indicates " TRUSTEE(S)" rather than "CORPORATE OFFICER(S)" as signatories.

  7. Per IRC 644, for tax years beginning after 12/31/86, the taxable year of a trust is the calendar year. Therefore, if an agent is examining a plan with a fiscal year end and a consent must be secured; the consent must be completed using the calendar year as the taxable period.

  8. The SOL on the trust year runs with the filing of the Form 5500 for the plan year in which the trust year ends. . See Exhibit 4.71.3-2, Form 1041 Statute Expiration Chart.
    Example: A pension trust is determined to be non-qualified for the fiscal plan year ending 6/30/02. Forms 1041 are required for the short period of 7/01/01 to 12/31/01 and for the calendar year 1/1/02 to 12/31/02. The SOL on the short trust year ending 12/31/01 expires on January 31, 2006, assuming the Form 5500 for the plan year ending 6/30/02 was filed timely. The SOL on the trust year ending 12/31/02 expires on January 31, 2007, assuming the Form 5500 for the plan year ending 6/30/03 was filed timely. If consents are necessary to protect the SOL, they need to be completed for these calendar year periods. Furthermore, the Form 1041 for the short period ending 200112 is due on April 15, 2002. The Form 1041 for the tax year ending 12/31/2002 is due on April 15, 2003.

  9. Both the plan trustee and the Director, Employee Plans (or delegate) must sign the Form 872 in order for the consent to be valid.

  10. The agent and the group manager should attempt to ensure that all cases in which a revocation/non-qualification is proposed (whether agreed or unagreed) has at least one year remaining on the statute of limitations to ensure appropriate time for unagreed processing and an appeal.

  11. For any examination involving revocation/non-qualification, the agent is responsible for preparing and forwarding necessary referrals to SB/SE or LMSB (as applicable) in a timely manner. The agent should consider a preliminary referral based on the issues contained in the proposed revocation/non-qualification. Any necessary support for preparation of the Form 1041 should be included with the referral. In the instance where a timely referral is made, the use of alpha code "PP" to update the SOL may also be appropriate. A memorandum of explanation detailing the use of alpha code " PP" in this instance should be signed by the manager and attached to Form 895 with a copy also placed in the case file. Additionally, a copy of the memo should be forwarded to the Area Manager. See IRM 4.71.9 for additional guidance on statute control procedures.

    Note:

    Pre-approval by the Area Manager to update a statute with alpha code "PP" is required in some Areas.

  12. See IRM 4.71.9 for additional guidance on statute control procedures.

4.71.3.4  (07-01-2003)
Processing Delinquent and Substitute Form 5500 Returns

  1. A delinquent Form 5500 return is a return that was not filed before the due date, including extensions, which the taxpayer voluntarily files with the Service.

  2. The EP agent prepares a substitute for return when a taxpayer refuses to file a Form 5500 return that is delinquent.

4.71.3.4.1  (07-01-2003)
Examination of Delinquent Form 5500 Returns

  1. The agent assigned a delinquent return is responsible for determining the correct information/tax and any liability for penalties. This responsibility exists even when:

    1. A Service Center or Collection function has determined reasonable cause for a delay in filing or has asserted a delinquency penalty, or;

    2. A delinquent return that shows no tax liability requires a change in tax liability after examination.

  2. When examining delinquent returns—

    1. Describe the circumstances of the delinquent filing in the examination report and workpapers, and;

    2. Specify whether there was a reasonable cause for the delay in filing. If reasonable cause for delay in filing is not established, the delinquency penalty will be asserted.

  3. If an entity contends during the examination that there was reasonable cause for delay in filing the return, that issue will be considered in the same manner and to the same extent as any other issue affecting the examination. If reasonable cause is established, the agent may recommend abatement of any penalty previously assessed. Form 4571, Explanation for Filing Return or Paying Tax Late can be used to document reasonable cause criteria.

  4. If the agent discovers that the entity has not filed other returns or forms under the jurisdiction of LMSB or SB/SE Operating Divisions (e.g., Form 1041 etc.), prepare Form 5666 or 5346 (Examination Information Report) and refer the file to LMSB or SB/SE Operating Divisions for their consideration. The referral should be sent through EP Classification.

4.71.3.4.2  (07-01-2003)
Delinquent Form 5500 Series Returns Discovered During Exam

  1. When an examiner discovers during any examination that an entity has failed to file a required Form 5500 series return and/or schedules, before soliciting any return determine:

    1. The taxable periods for which the entity was required to file returns;

    2. The reasons why the entity failed to file the required returns;

    3. Whether any indications of fraud exist, and;

    4. Applicable penalties.

  2. If there is an indication of willful failure to file the required return or statement, or any other indications of fraud then follow procedures for informing Criminal Investigation Division (CID). See IRM 25.1, Fraud Handbook.

  3. Coordination with the EP Fraud Referral Specialist in EP Special Review is also required. The phone number for Special Review is 410-962-3194.

  4. If the examiner determines that the indication of fraud is not present:

    1. Advise the entity of the requirement of their responsibility to file all delinquent returns and statements, without regard to the number of years or taxable periods involved.

    2. Solicit the returns, including any tax liability, together with a written statement from the Trustee, signed under penalty of perjury, giving all the facts and circumstances that caused the delay. The statement should include any reasons that the entity believes would establish reasonable cause for failure to file. Form 4571, Explanation for Filing Return or Paying Tax Late can be used for this purpose.

  5. When an entity is advised of the requirement to file all delinquent returns but refuses to file, or states it is unable to file all the returns, a determination will be made as to the extent the filing requirements should be enforced, in accordance with the criteria published in policy statement P–5–133. See IRM 1.2.1.

4.71.3.4.2.1  (07-01-2003)
Extent of Retroactive Enforcement

  1. The extent to which delinquency procedures will be enforced will depend upon the facts and circumstances in each case. As a general rule, enforcement should not extend beyond six prior years. However, shorter or longer periods may be applied when it is determined that such action is warranted.
    Example: If the examination involves a plan or trust which has been granted a conditional waiver of the minimum funding deficiency, the extent of enforcement may exceed six prior years.

  2. Specific facts to take into account include, but are not limited to:

    1. Degree of flagrancy;

    2. Whether the delinquency involves diverted trust funds;

    3. Circumstances peculiar to a specific entity such as to plan size, industry or plan type, and;

    4. Expenditure of resources required in relation to anticipated results, provided there are not other overriding considerations.

  3. Delinquency procedures will generally be enforced when the entity has failed to file a one-time pension return or statement. In other cases involving delinquent documents, delinquency procedures should be observed for at least one period, taking into consideration the facts and circumstances of each case.

  4. If the agent believes enforcement should extend beyond a six-year period, group manager approval will be solicited. The case chronology will be documented with the manager’s instruction.

  5. Group manager approval will be solicited if the agent believes delinquency procedures need not be enforced for the full period of the delinquency if less than six years. . The case chronology will be documented with the manager’s instructions.

  6. If delinquency procedures are enforced for six years, managerial approval is not required if additional periods are delinquent and the agent determines that enforcement should not be extended beyond the six-year period.

4.71.3.4.3  (07-01-2003)
Reasonable Cause Criteria

  1. In accordance with policy statement P–2–7, the following eight specific causes for failure to file a return within the time prescribed by law, if clearly established by the taxpayer, will be accepted as reasonable. IRM 20.1.1.3.1 contains an explanation of the factors involved in determining reasonable cause.

    1. Return was mailed in time. A return is considered mailed in time if the date of the postmark stamped on the envelope falls on or before the due date. If the due date falls on Sunday or a legal holiday, the following business day is within the legal period.

    2. Delay or failure to file was due to erroneous information given the taxpayer by an Internal Revenue officer or employee. See IRM 20.1.1.3.2.4.1 and 20.1.1.3.2.4.2.

    3. Delay was caused by death or serious illness of the taxpayer or a death or serious illness in his/her immediate family. In the case of a corporation, estate, trust, etc., the death or serious illness must have been of an individual having sole authority to execute the return, or of a member of such individual’s immediate family. See IRM 20.1.1.3.1.2.4.

    4. Delay was caused by unavoidable absence of the taxpayer. In the case of a corporation, estate, trust, etc., the absence must have been of an individual having sole authority to execute the return. See IRM 20.1.1.3.1.2.4.

    5. Delinquency was caused by the destruction by fire or other casualty of the taxpayer’s place of business or business records. See IRM 20.1.1.3.2.5.

    6. Taxpayer, prior to the time for filing the return, applied to the Area Director's office for proper blank forms and these were not furnished to him/her in sufficient time to permit the executed return to be filed on or before its due date.

    7. Taxpayer proves that he/she personally visited the office of the Area Director or subordinate office before the expiration of the time within which to file the return for the purpose of securing information or aid to properly make his/her return, and through no fault of his/her own was unable to see the representative of the Service.

  2. If the cause does not fall within one of the reasonable causes enumerated above, the agent will decide whether, in his/her opinion, the statement of facts submitted by the taxpayer establishes a reasonable cause for delinquency.

    1. A cause for delinquency which appears to a person of ordinary prudence and intelligence as a reasonable cause for delay in filing a return and which clearly indicates no willful intent to disobey the taxing statutes, may be accepted as reasonable. See IRM 20.1.1.3.1.2.

    2. In cases where ignorance of the law is claimed, reasonable cause should not be presumed. Each case must be determined on its own merit. Ignorance of the law can be considered for reasonable cause only if other facts support this contention, such as first-time filers, sudden first-time FTD depositary requirements, etc. The taxpayer should evidence ordinary business care and prudence and the case should be judged on its own merits. See IRM 20.1.1.3.1.2.1. The Supreme Court has held that generally a taxpayer’s reliance on a professional agent, such as an attorney or accountant, to file a timely tax return does not constitute reasonable cause for purposes of IRC 6651(a). See U.S. v. Boyle, 85–1 USTC paragraph 13,602.

  3. The entity must make an affirmative showing of reasonable cause in the form of a written statement, under the penalties of perjury, setting forth all the facts alleged as reasonable cause. Prepare Form 4571, Explanation for Filing Return Late or Paying Tax Late, for this purpose.

4.71.3.4.4  (07-01-2003)
Delinquent Return and Substitute for Return Processing Procedures

  1. When there is evidence that a required Form 5500 series return has not been filed, the agent will request a transcript of the account for the applicable return and year to document what action has been taken. For this purpose, an EMFOLT print can be obtained by submitting Form 6882, IDRS/Master File Information Request.

  2. If the transcript reflects a transaction code 150, a Form 5500 series return has been filed and a delinquent or substitute for return is not necessary.

  3. When securing a delinquent or substitute for return, the version of the Form 5500 that is applicable for the year being solicited will be used.

  4. Substitute for returns should contain entity information only. Do not attach additional schedules.

  5. Delinquent and substitute for returns must be forwarded to the Department of Labor— Employee Benefits Security Administration (formerly known as the PWBA) immediately upon pick-up or preparation so that the Form 5500 series return will post and the AIMS account will be established by the time the case is ready for closing (if the return is examined).

  6. If sent regular mail, returns should be forwarded to:

    EBSA

    P. O. Box 7043

    Lawrence, KS 66044-7043

  7. If sent express mail, returns should be sent to:

    EBSA

    Attn. EFAST

    3833 Greenway Dr.

    Lawrence, KS 66046-1290

  8. Delinquent/Substitute Returns must be established on AIMS by submitting a Form 5597 (see Exhibit 4.71.3-6) as soon as it has been determined that an examination will be conducted or when examination time is first applied. Push Code 080 must be used in Item 11 when establishing the case on AIMS prior to the posting of the return by the Service Center.

    Note:

    Delinquent/Substitute Form 5500 series returns secured will be examined at the discretion of the group manager.

4.71.3.4.4.1  (07-01-2003)
Processing Delinquent Form 5500 Series Returns

  1. Upon receipt of a delinquent Form 5500 series return, the Examiner/Specialist must ensure that the following items are on the return:

    1. Name of the employer/organization—
      • The employer’s/organization’s name must be typed or printed legibly, with no strikeovers.
      • When possible, it must duplicate the name used on a previously filed return with the same Employer Identification Number (EIN).
      • The name used with a recently acquired EIN should duplicate the employer’s/organization’s SS–4, Application for Employer Identification Number.
      • If the name is not correct, prepare or secure a corrected return and solicit the employer’s/organization’s signature on the corrected delinquent return. Mark an "X" across the face of the incorrect return. Write the word "Invalidated" , sign and date below the notation.

    2. Address of the employer/organization—Verify with the employer or organization that the address shown on the return is the employer’s or organization’s current address.

    3. Employer Identification Number—Verify the EIN shown on the return is correct by researching AIMS, EPMF or BMF. If the employer or organization does not have an EIN, refer to IRM 21.7.13.

    4. Required forms and schedules—Verify that all forms and schedules are present and the computations are correct. EP is responsible for the accuracy of the return and no further verification is done.

    5. The employer’s/organization’s original signature and the date the return was signed.

    6. Taxable Period—Use the current or appropriate year’s tax form.

  2. Write in red on the top margin of the original return, " Delinquent return secured by TEGE Employee Plans." Reminder: Leave room in the upper right corner for the DLN to be entered by the service center.

  3. Date stamp the delinquent return when it is received. If a date stamp is not available, the agent should annotate in the middle of the return over the wording but not over the numbers "Received," the date received, and the Examiner’s/Specialist’s name and title.

  4. Write in red on the bottom margin of the original delinquent Form 5500 series return, "TC 599 CC 97."

  5. Attach Form 3198, Special Handling Notice, for each return being submitted to indicate if the delinquency penalty under IRC 6652(e) should or should not be assessed. Penalties are equal to $25 per day that the return is late up to $15,000.

  6. Attach Form 13133, Expedite Processing Cycle, to the front of each return being submitted. Check the box for delinquent return.

  7. Attach a copy of a recent (not more than sixty days old) transcript, which was used in the determination of the plan sponsor’s failure to file.

  8. Prepare Form 3210, Document Transmittal. List each return being mailed to the EBSA.

  9. Mail the return package (Form 5500 with all applicable schedules, Form 3198 – Special Handling Notice, Form 13133 – Expedite Processing Cycle, and Form 3210 – Document Transmittal) to:

    EBSA

    P. O. Box 7049

    Lawrence, KS 66044-7049

  10. If payment is secured for delinquency penalties:

    • Prepare Form 3244–A, Payment Posting Voucher, following normal procedures. Indicate payment as advance payment of deficiency, TC 640.

    • Prepare Form 3210. List the check number and the amount in the body of Form 3210.

    • Send Form 3244–A and the check to:

    IRS

    1973 N. Rulon White Blvd.

    Mail Stop 1999

    Ogden, UT 84201

  11. If the delinquent return is being examined, prepare Form 5597, EP Master File Request to establish the return on AIMS and EPIC. See IRM 4.71.3.5 for instructions in completion of Form 5597.

  12. When completing the EP Examined Closing Report (Exhibit 4.71.3-7), Form 5650, for an examined delinquent return, see IRM 4.71.3.6.

4.71.3.4.4.2  (07-01-2003)
Processing Forms 5500 Substitute for Returns

  1. The agent will prepare a substitute for return when a taxpayer refuses to file a required tax return.

  2. Substitute for returns should contain entity information only. Do not attach additional schedules.

  3. Ensure that the return is notated in bold red letters " Substitute For Return Prepared by TEGE Employee Plans" at the top of the first page of the return.

  4. Ensure that the taxpayer’s name, address, tax period, EIN, plan name, and plan number are reflected on the return.

  5. Attach Form 3198, Special Handling Notice, for each return being submitted to indicate if the delinquency penalty should be assessed. Penalties should be assessed under IRC 6652(e) on substitute for returns. Penalties are equal to $25 per day up to a maximum of $15,000.

  6. Attach Form 13133, Expedite Processing Cycle, to the front of each return being submitted. Check the box for substitute for return.

  7. Attach a copy of a recent (not more than sixty days old) transcript, which was used in the determination of the plan sponsor’s failure to file.

  8. Prepare Form 3210, Document Transmittal. List each return being mailed to the EBSA.

  9. Substitute for returns must be forwarded to the Department of Labor – EBSA immediately upon preparation so that the return will post and the AIMS account will be established by the time the case is ready for closing.

  10. Returns should be forwarded to:

    EBSA

    P. O. Box 7049

    Lawrence, KS 66044-7049

  11. If the return is being examined, prepare and input Form 5597, EP Master File Request. See IRM 4.71.3.5 for instructions in completion of Form 5597.

  12. If payment is secured for delinquency penalties:

    • Prepare Form 3244–A, Payment Posting Voucher, following normal procedures. Indicate payment as advance payment of deficiency, TC 640.

    • Prepare Form 3210. List the check number and the amount in the body of Form 3210.

    • Send Form 3244–A and the check to:

    IRS

    1973 N. Rulon White Blvd.

    Mail Stop 1999

    Ogden, UT 84201

4.71.3.5  (07-01-2003)
Preparation of Form 5597

  1. Form 5597, TE/GE IMF/BMF/EPMF Request, is used to establish Forms 5500 on EPIC and the EPMF module of AIMS.

  2. Complete the following line items on Form 5597 as noted:

    1. Item 2: Enter a source code of 44.

    2. Item 3: Enter the primary business code.
      • 401 for Northeast.
      • 402 for Mid-Atlantic.
      • 403 for Great Lakes.
      • 404 for Gulf Coast.
      • 405 for Central Mountain.
      • 406 for Pacific Coast.
      • 410 for Exam Programs and Review.

    3. Item 4: Leave blank.

    4. Item 5: Enter the examiner’s group code (i.e. 7653).

    5. Item 6: Enter an MFT of 74.

    6. Item 7: Enter a status code of 12.

    7. Item 8: Enter 1 for return request indicator.

    8. Item 9: Enter the project code. If there is none, enter 000.

    9. Item 11: Enter a push code of - 080.

    10. Form: Enter 5500.

    11. Item 14A: Enter the taxpayer’s EIN, followed by " P" .

    12. Item 14B: Enter the taxpayer’s name.

    13. Item 15: Enter the name control for the taxpayer.

    14. Item 17: Enter the tax period.

    15. Item 18: Enter an activity code of 307 for a Form 5500 or 308 for a Form 5500C/R.

    16. Item 20: Enter the plan number.

    17. Item 21: Enter the taxpayer’s address.

    18. Item 22: Enter the reason for the establishment of the Form 5500.

    19. Item 23: Enter the examiner’s name, organization and date.

    20. Item 24: Secure the group manager’s signature.

  3. See Exhibit 4.71.3-6 for an example of a completed Form 5597.

4.71.3.6  (07-01-2003)
Completion of Form 5650

  1. Form 5650, EP Examined Closing Record, is used to close examined Forms 5500.

  2. The following line items on Form 5650 should be completed as noted:

    1. P7-18: Enter the taxpayer’s EIN.

    2. P20-22: Enter the three digit plan number.

    3. P24-29: Enter the tax period.

    4. P31-34: Enter the name control.

    5. C: Enter the name of the taxpayer.

    6. Item 13: Enter the applicable disposal code (06, 07, 09, or 10). Leave blank on unagreed cases

    7. Item 14: If the statute of limitations has been extended, enter the statute expiration date.

    8. Item 28: Enter the examiner’s time on the case.

    9. Item 30: Enter the Examination Technique Code.
      • 2 for an OCEP.
      • 4 for a Field Exam.

    10. Item 31: Enter the examiner’s grade.

    11. Item 32: Enter the grade of the case.

    12. Item 33: Enter the examiner’s last name, leave a space and then first initial.

    13. Item 40: Enter the Project Code. If there is none, enter 000.

    14. Item 50: Enter the Examiner’s Group Number.

    15. Item 600: Enter 512 (Revenue Agent) or 987 (Tax Law Specialist.)

    16. Item 601: Enter the Examiner’s Number:

      Note:

      1. The first three digits are the Primary Business Code (PBC), also referred to as BOD code:
      • 401 for Northeast.
      • 402 for Mid-Atlantic.
      • 403 for Great Lakes.
      • 404 for Gulf Coast.
      • 405 for Central Mountain.
      • 406 for Pacific Coast.
      • 410 for Exam Programs and Review.

      Note:

      2. The fourth and fifth digits are the last two digits of the agent’s group number.

      Note:

      3. The sixth digit is always 0.

      Note:

      4. The seventh and eighth digits are the two-digit specialist number assigned to the agent.


      Example : An agent in group 7653 in Dallas, TX with specialist number 25 would have an examiner number of 40453025.

    17. Item 602: Enter excise tax picked up during the exam that is not reflected on Form 5599 of a related Form 5330 that was picked up and not examined per managerial direction.

    18. Item 603: Enter any penalties picked up during the exam that is not reflected on or Form 5599 of a related Form 5330 that was picked up and not examined per managerial direction.

    19. Item 604: Enter totals from line 603.

    20. Item 605: Enter the amount of proposed adjustments referred to Examination Functional Units.

    21. Item 606: Enter deductions claimed for contributions to the plan.

    22. Item 607: Enter total trust assets as of the end of the plan year.

    23. Item 608: Enter the number of participants that were directly affected by the exam (i.e., a change in account balance or vesting percentage).

      Note:

      A participant is not considered directly affected merely because the plan could have been disqualified.

    24. Item 609: Enter plan type:
      • 1 for a defined benefit plan.
      • 2 for a defined contribution plan.

    25. Item 610: Enter the applicable Issue Code(s) that relate to the Disposal Code.

    26. Item 612: Enter the applicable NAICS Code (See Document 6476).

4.71.3.7  (07-01-2003)
Penalties Related to Forms 5500

  1. This chart provides the Code citations for requirements for filing returns, statements or reports relating to Forms 5500.

    Employee Plans Type of Return, Provision Statement or Report IRC Filing Requirement Person Liable IRC Penalty Citation
    Annual Registration Statement– – Schedule SSA 6057(a) Plan Administrator (PA) within meaning of 414(g) 6652(d)(1)
    Notification of Change in Status 6057(b) PA 6652(d)(2)
    Information Required in Connection with Certain Plans of Deferred Compensation, Form 5500 6058(a) Employer 6652(e)
    Actuarial Statement in Case of Mergers, etc., Forms 5310 & 5310-A 6058(b) PA 6652(e)
    Information Relating to Certain Trusts and Annuity Plans 6047(a) Trustees and Insurance Companies 6652(e)
    Qualified Voluntary Employee Contributions 219(f)(4) PA 6652(g)
    Special Rules for Pensions, Annuities, and Certain Other Deferred Income 3405(d)(10)(B) Payor 6652(h)
    Written Explanation to Receipts of Distributions 402(f) PA 6652(i)
    Eligible for Rollover Treatment 402(f) PA 6652(i)
    Negligence   Taxpayer 6653(a)
    Fraud   Taxpayer 6653(b)
    Overstatements of Pension Liabilities   Employer 6659A
    Receipts for Employees – Withholding 6051(a) Employer 6672 and 6674
    Individual Statement to Participant 6057(e) PA 6690
    Periodic Report of Actuary – Schedule B 6059 PA 6692
    Report on Individual Retirement Account or Annuity 408(i) Trustee if IRA; Issuer if endowment or individual retirement annuity 6693(a)

Exhibit 4.71.3-1  (07-01-2003)
Unagreed Plan Disqualification Worksheet

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Exhibit 4.71.3-2  (07-01-2003)
Form 1041 Statute Expiration Chart (Worksheet)

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Exhibit 4.71.3-3  (07-01-2003)
Letter 1756

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Exhibit 4.71.3-4  (07-01-2003)
Letter 1758

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Exhibit 4.71.3-5  (07-01-2003)
EP Administrative Record Index

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Exhibit 4.71.3-6  (07-01-2003)
Form 5597, TE/GE IMF/BMF/EPMF Request

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Exhibit 4.71.3-7  (07-01-2003)
Form 5650, EP Examined Closing Record

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