ABCC : Application's document Page

MOIL-View At ABCC
Name: 
MOIL-View
Version(s): 
10.0
Category: 
Molecular Modeling; Molecular Visualization
Author(s)/Vendor(s): 
Carlos Simmerling 
Department of Chemistry
The State University of New York
Stony Brook, NY 11794-3400
(516)632-1336
Program Description: 
MOIL-View is a program designed to allow the user to view and
analyze molecular structures and molecular dynamics trajectories.

Currently supported file formats:

Coordinates:

CRD: CHARMm format coordinate files
PDB: format used by the Brookhaven Protein Data Bank
AMBER: AMBER restart file format. Coordinates are required while 
  velocities and box dimensions are not. If box dimensions are 
  present, they are used for the 'draw box outline' command. 

Trajectory:

DCD: format used by the CHARMm and MOIL programs
PATH: higher precision format used by MOIL
AMBER: only formatted AMBER files are allowed (no binary files). 
  This option is for trajectories that do not include periodic box 
  information.
AMBER PBC: This option should be used for AMBER trajectories which 
  contain periodic box information.
Computer platform(s): 
SGI
Location: 
/usr/local/fbscapp/MOIL-View.10
Access: 
Account on SGI's systems at ABCC is required to use
MOIL-View.

When using C-shell:
set path = (/usr/local/fbscapp/MOIL-View.10/exe $path)
moil-view
Documentation: 
Available in both pdf and HTML format:
/usr/local/fbscapp/MOIL-View.10/manual.v10.pdf
/usr/local/fbscapp/MOIL-View.10/manual.v10.html
Web Site: 
http://morita.chem.sunysb.edu/~carlos/moil-view.html
ABCC Contact Person: 
Sarangan Ravichandran
sravi@ncifcrf.gov
301-8461991
Created By: 
miaskiew
Created Time: 
2001-10-29
Updated By: 
ravichas
Updated Time: 
2002-06-21
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