| | Research Articles Heparin-Binding-Hemagglutinin-Induced IFN-γ Release as a Diagnostic Tool for Latent Tuberculosis Jean-Michel Hougardy, Kinda Schepers, Sammy Place, Annie Drowart, Véronique Lechevin, Virginie Verscheure, Anne-Sophie Debrie, T. Mark Doherty, Jean-Paul Van Vooren, Camille Locht, and Françoise Mascart PMCID: PMC1991599 Novel Decapeptides that Bind Avidly and Deliver Radioisotope to Colon Cancer Cells John M. Abraham, Fumiaki Sato, Yulan Cheng, Bogdan Paun, Takatsugu Kan, Alexandru Olaru, Zhe Jin, Jian Yang, Rachana Agarwal, Stefan David, James P. Hamilton, Tetsuo Ito, Yuriko Mori, and Stephen J. Meltzer PMCID: PMC1978517 Transposon Excision from an Atypical Site: A Mechanism of Evolution of Novel Transposable Elements Marybeth Langer, Lynn F. Sniderhan, Ueli Grossniklaus, and Animesh Ray PMCID: PMC1978519 A Diverse Group of Previously Unrecognized Human Rhinoviruses Are Common Causes of Respiratory Illnesses in Infants Wai-Ming Lee, Christin Kiesner, Tressa Pappas, Iris Lee, Kris Grindle, Tuomas Jartti, Bogdan Jakiela, Robert F. Lemanske, Jr., Peter A. Shult, and James E. Gern PMCID: PMC1989136 SLiMFinder: A Probabilistic Method for Identifying Over-Represented, Convergently Evolved, Short Linear Motifs in Proteins Richard J. Edwards, Norman E. Davey, and Denis C. Shields PMCID: PMC1989135 Molecular Analysis of a Leprosy Immunotherapeutic Bacillus Provides Insights into Mycobacterium Evolution Niyaz Ahmed, Vikram Saini, Saurabh Raghuvanshi, Jitendra P. Khurana, Akhilesh K. Tyagi, Anil K. Tyagi, and Seyed E. Hasnain PMCID: PMC1989137 The Mucosae-Associated Epithelial Chemokine (MEC/CCL28) Modulates Immunity in HIV Infection Eleonora Castelletti, Sergio Lo Caputo, Louise Kuhn, Manuela Borelli, Johanna Gajardo, Moses Sinkala, Daria Trabattoni, Chipepo Kankasa, Eleonora Lauri, Alberto Clivio, Luca Piacentini, Dorothy H. Bray, Grace M. Aldrovandi, Donald M. Thea, Francisco Veas, Manuela Nebuloni, Francesco Mazzotta, and Mario Clerici PMCID: PMC1989139 A Novel Regulator Couples Sporogenesis and Trehalose Biogenesis in Aspergillus nidulans Min Ni and Jae-Hyuk Yu PMCID: PMC1978537 Modulation of Motor Cortex Excitability by Physical Similarity with an Observed Hand Action Marie-Christine Désy and Hugo Théoret PMCID: PMC1989142 An Expanded Set of Amino Acid Analogs for the Ribosomal Translation of Unnatural Peptides Matthew C. T. Hartman, Kristopher Josephson, Chi-Wang Lin, and Jack W. Szostak PMCID: PMC1989143 The Genetic Signature of Sex-Biased Migration in Patrilocal Chimpanzees and Humans Kevin E. Langergraber, Heike Siedel, John C. Mitani, Richard W. Wrangham, Vernon Reynolds, Kevin Hunt, and Linda Vigilant PMCID: PMC1989134 Non-Invasive In Vivo Imaging of Calcium Signaling in Mice Kelly L. Rogers, Sandrine Picaud, Emilie Roncali, Raphaël Boisgard, Cesare Colasante, Jacques Stinnakre, Bertrand Tavitian, and Philippe Brûlet PMCID: PMC1991622 Endothelial Progenitor Cells, Cardiovascular Risk Factors, Cytokine Levels and Atherosclerosis – Results from a Large Population-Based Study Qingzhong Xiao, Stefan Kiechl, Seema Patel, Friedrich Oberhollenzer, Siegfried Weger, Agnes Mayr, Bernhard Metzler, Markus Reindl, Yanhua Hu, Johann Willeit, and Qingbo Xu PMCID: PMC1995762 Membrane Recruitment of Scaffold Proteins Drives Specific Signaling Frédéric Pincet PMCID: PMC1991591 Haemoglobin C and S Role in Acquired Immunity against Plasmodium falciparum Malaria Federica Verra, Jacques Simpore, George M. Warimwe, Kevin K. Tetteh, Tevis Howard, Faith H. A. Osier, Germana Bancone, Pamela Avellino, Isa Blot, Greg Fegan, Peter C. Bull, Thomas N. Williams, David J. Conway, Kevin Marsh, and David Modiano PMCID: PMC1991593 Ewing Sarcoma Protein Ewsr1 Maintains Mitotic Integrity and Proneural Cell Survival in the Zebrafish Embryo Mizuki Azuma, Lisa J. Embree, Hatem Sabaawy, and Dennis D. Hickstein PMCID: PMC1991596 Effects of Insemination Quantity on Honey Bee Queen Physiology Freddie-Jeanne Richard, David R. Tarpy, and Christina M. Grozinger PMCID: PMC1989138 Germ Line Origin and Somatic Mutations Determine the Target Tissues in Systemic AL-Amyloidosis Stina Enqvist, Knut Sletten, Fred J. Stevens, Ulf Hellman, and Per Westermark PMCID: PMC1989140 Conservation, Variability and the Modeling of Active Protein Kinases James D. R. Knight, Bin Qian, David Baker, and Rashmi Kothary PMCID: PMC1989141 Investigating the Role of Islet Cytoarchitecture in Its Oscillation Using a New β-Cell Cluster Model Aparna Nittala, Soumitra Ghosh, and Xujing Wang PMCID: PMC1991600 Design and Pre-Clinical Evaluation of a Universal HIV-1 Vaccine Sven Létourneau, Eung-Jun Im, Tumelo Mashishi, Choechoe Brereton, Anne Bridgeman, Hongbing Yang, Lucy Dorrell, Tao Dong, Bette Korber, Andrew J. McMichael, and Tomáš Hanke PMCID: PMC1991584 A Multidirectional Non-Cell Autonomous Control and a Genetic Interaction Restricting Tobacco Etch Virus Susceptibility in Arabidopsis Suresh Gopalan PMCID: PMC1991623 Antiviral Oseltamivir Is not Removed or Degraded in Normal Sewage Water Treatment: Implications for Development of Resistance by Influenza A Virus Jerker Fick, Richard H. Lindberg, Mats Tysklind, Paul D. Haemig, Jonas Waldenström, Anders Wallensten, and Björn Olsen PMCID: PMC1991587 Carbon Dioxide Inhalation Induces Dose-Dependent and Age-Related Negative Affectivity Eric J. Griez, Alessandro Colasanti, Rob van Diest, Ewa Salamon, and Koen Schruers PMCID: PMC1991589 An Improved, Bias-Reduced Probabilistic Functional Gene Network of Baker's Yeast, Saccharomyces cerevisiae Insuk Lee, Zhihua Li, and Edward M. Marcotte PMCID: PMC1991590 Deletion of Genes Implicated in Protecting the Integrity of Male Germ Cells Has Differential Effects on the Incidence of DNA Breaks and Germ Cell Loss Catriona Paul, Joanne E. Povey, Nicola J. Lawrence, Jim Selfridge, David W. Melton, and Philippa T. K. Saunders PMCID: PMC1991594 Effect of Cellular Quiescence on the Success of Targeted CML Therapy Natalia L. Komarova and Dominik Wodarz PMCID: PMC1991595 Creatine Monohydrate and Conjugated Linoleic Acid Improve Strength and Body Composition Following Resistance Exercise in Older Adults Mark Tarnopolsky, Andrew Zimmer, Jeremy Paikin, Adeel Safdar, Alissa Aboud, Erin Pearce, Brian Roy, and Timothy Doherty PMCID: PMC1994592 Deletion of PKBα/Akt1 Affects Thymic Development Elisabeth Fayard, Jason Gill, Magdalena Paolino, Debby Hynx, Georg A. Holländer, and Brian A. Hemmings PMCID: PMC1991598 Structure and Reaction Mechanism of Basil Eugenol Synthase Gordon V. Louie, Thomas J. Baiga, Marianne E. Bowman, Takao Koeduka, John H. Taylor, Snejina M. Spassova, Eran Pichersky, and Joseph P. Noel PMCID: PMC1991597 Ant Species Differences Determined by Epistasis between Brood and Worker Genomes Timothy A. Linksvayer PMCID: PMC1991621 Phylogeny, Diet, and Cranial Integration in Australodelphian Marsupials Anjali Goswami PMCID: PMC1994583 A Genetic Code Alteration Is a Phenotype Diversity Generator in the Human Pathogen Candida albicans Isabel Miranda, Rita Rocha, Maria C. Santos, Denisa D. Mateus, Gabriela R. Moura, Laura Carreto, and Manuel A. S. Santos PMCID: PMC1991585 Siglecg Limits the Size of B1a B Cell Lineage by Down-Regulating NFκB Activation Cheng Ding, Yan Liu, Yin Wang, Bae Keun Park, Cun-Yu Wang, Pan Zheng, and Yang Liu PMCID: PMC1994585 Composition and Hierarchical Organisation of a Spider Silk Alexander Sponner, Wolfram Vater, Shamci Monajembashi, Eberhard Unger, Frank Grosse, and Klaus Weisshart PMCID: PMC1994588 Inflated Impact Factors? The True Impact of Evolutionary Papers in Non-Evolutionary Journals Erik Postma PMCID: PMC1994586 Membrane Type-1 Matrix Metalloproteinases and Tissue Inhibitor of Metalloproteinases-2 RNA Levels Mimic Each Other during Xenopus laevis Metamorphosis Logan A. Walsh, Deanna A. Carere, Colin A. Cooper, and Sashko Damjanovski PMCID: PMC1991586 Sexual Risk Factors for HIV Infection in Early and Advanced HIV Epidemics in Sub-Saharan Africa: Systematic Overview of 68 Epidemiological Studies Li Chen, Prabhat Jha, Bridget Stirling, Sema K. Sgaier, Tina Daid, Rupert Kaul, Nico Nagelkerke, and for the International Studies of HIV/AIDS (ISHA) Investigators PMCID: PMC1994584 Optimality Driven Nearest Centroid Classification from Genomic Data Alan R. Dabney and John D. Storey PMCID: PMC1991588 Adaptive Evolution of a Stress Response Protein Tom J. Little, Lenny Nelson, and Ted Hupp PMCID: PMC1994589 Tsukushi Modulates Xnr2, FGF and BMP Signaling: Regulation of Xenopus Germ Layer Formation Samantha A. Morris, Alexandra D. Almeida, Hideaki Tanaka, Kunimasa Ohta, and Shin-ichi Ohnuma PMCID: PMC1994590 Implementing Routine HIV Testing: The Role of State Law Leslie E. Wolf, Alexis Donoghoe, and Tim Lane PMCID: PMC1994587 SIRNA-Directed In Vivo Silencing of Androgen Receptor Inhibits the Growth of Castration-Resistant Prostate Carcinomas Daniel Compagno, Carole Merle, Aurélie Morin, Cristèle Gilbert, Jacques R. R. Mathieu, Aline Bozec, Claire Mauduit, Mohammed Benahmed, and Florence Cabon PMCID: PMC1994591 Imaging of Musculoskeletal Bacterial Infections by [124I]FIAU-PET/CT Luis A. Diaz, Jr., Catherine A. Foss, Katherine Thornton, Sridhar Nimmagadda, Christopher J. Endres, Ovsev Uzuner, Thorsten M. Seyler, Slif D. Ulrich, Janet Conway, Chetan Bettegowda, Nishant Agrawal, Ian Cheong, Xiaosong Zhang, Paul W. Ladenson, Barry N. Vogelstein, Michael A. Mont, Shibin Zhou, Kenneth W. Kinzler, Bert Vogelstein, and Martin G. Pomper PMCID: PMC1994593 Predicting Spatial Patterns of Plant Recruitment Using Animal-Displacement Kernels Luis Santamaría, Javier Rodríguez-Pérez, Asier R. Larrinaga, and Beatriz Pias PMCID: PMC1999654 Effect of Differential N-linked and O-linked Mannosylation on Recognition of Fungal Antigens by Dendritic Cells Jennifer S. Lam, Haibin Huang, and Stuart M. Levitz PMCID: PMC1995759 Cellular mRNA Activates Transcription Elongation by Displacing 7SK RNA Tara M. Young, Michael Tsai, Bin Tian, Michael B. Mathews, and Tsafi Pe'ery PMCID: PMC1995758 Sensitive Detection of p65 Homodimers Using Red-Shifted and Fluorescent Protein-Based FRET Couples Joachim Goedhart, Joop E. M. Vermeer, Merel J. W. Adjobo-Hermans, Laura van Weeren, and Theodorus W. J. Gadella, Jr. PMCID: PMC1995760 Large-Scale Mitochondrial DNA Analysis of the Domestic Goat Reveals Six Haplogroups with High Diversity Saeid Naderi, Hamid-Reza Rezaei, Pierre Taberlet, Stéphanie Zundel, Seyed-Abbas Rafat, Hamid-Reza Naghash, Mohamed A. A. El-Barody, Okan Ertugrul, François Pompanon, and for the Econogene Consortium PMCID: PMC1995761 Variable Expression of Cre Recombinase Transgenes Precludes Reliable Prediction of Tissue-Specific Gene Disruption by Tail-Biopsy Genotyping Tim J. Schulz, Markus Glaubitz, Doreen Kuhlow, René Thierbach, Marc Birringer, Pablo Steinberg, Andreas F. H. Pfeiffer, and Michael Ristow PMCID: PMC1995755 Ataxin-1 Fusion Partners Alter PolyQ Lethality and Aggregation Tina Rich and Archana Varadaraj PMCID: PMC1995763 Moderate Neonatal Stress Decreases Within-Group Variation in Behavioral, Immune and HPA Responses in Adult Mice Simone Macrì, Paolo Pasquali, Luca Tommaso Bonsignore, Stefano Pieretti, Francesca Cirulli, Flavia Chiarotti, and Giovanni Laviola PMCID: PMC2000350 The Chemokine Receptor CXCR4 Strongly Promotes Neuroblastoma Primary Tumour and Metastatic Growth, but not Invasion Roland Meier, Annick Mühlethaler-Mottet, Marjorie Flahaut, Aurélie Coulon, Carlo Fusco, Fawzia Louache, Katya Auderset, Katia Balmas Bourloud, Estelle Daudigeos, Curzio Ruegg, Gilles Vassal, Nicole Gross, and Jean-Marc Joseph PMCID: PMC1995764 Habitat Fragmentation, Variable Edge Effects, and the Landscape-Divergence Hypothesis William F. Laurance, Henrique E. M. Nascimento, Susan G. Laurance, Ana Andrade, Robert M. Ewers, Kyle E. Harms, Regina C. C. Luizão, and José E. Ribeiro PMCID: PMC1995757 A Randomized Placebo-Controlled Phase Ia Malaria Vaccine Trial of Two Virosome-Formulated Synthetic Peptides in Healthy Adult Volunteers Blaise Genton, Gerd Pluschke, Lukas Degen, Andreas R. Kammer, Nicole Westerfeld, Shinji L. Okitsu, Sandro Schroller, Penelope Vounatsou, Markus M. Mueller, Marcel Tanner, and Rinaldo Zurbriggen PMCID: PMC2001290 Homeotic Evolution in the Mammalia: Diversification of Therian Axial Seriation and the Morphogenetic Basis of Human Origins Aaron G. Filler PMCID: PMC2000357 miRNA Profiling of Naïve, Effector and Memory CD8 T Cells Haoquan Wu, Joel R. Neilson, Priti Kumar, Monika Manocha, Premlata Shankar, Phillip A. Sharp, and N. Manjunath PMCID: PMC2000354 Maladaptation and the Paradox of Robustness in Evolution Steven A. Frank PMCID: PMC2000348 Nullomers: Really a Matter of Natural Selection? Claudia Acquisti, George Poste, David Curtiss, and Sudhir Kumar PMCID: PMC1995752 Primaquine Clears Submicroscopic Plasmodium falciparum Gametocytes that Persist after Treatment with Sulphadoxine-Pyrimethamine and Artesunate Seif Shekalaghe, Chris Drakeley, Roly Gosling, Arnold Ndaro, Monique van Meegeren, Anders Enevold, Michael Alifrangis, Frank Mosha, Robert Sauerwein, and Teun Bousema PMCID: PMC1995753 Shiga Toxin-Mediated Hemolytic Uremic Syndrome: Time to Change the Diagnostic Paradigm? Martina Bielaszewska, Robin Köck, Alexander W. Friedrich, Christof von Eiff, Lothar B. Zimmerhackl, Helge Karch, and Alexander Mellmann PMCID: PMC1995754 Normal-Mode-Analysis–Monitored Energy Minimization Procedure for Generating Small–Molecule Bound Conformations Qi Wang and Yuan-Ping Pang PMCID: PMC1995756 Demographic Histories of ERV-K in Humans, Chimpanzees and Rhesus Monkeys Camila M. Romano, Fernando L. de Melo, Marco Aurelio B. Corsini, Edward C. Holmes, and Paolo M. de A. Zanotto PMCID: PMC2001186 The Environmental Dependence of Inbreeding Depression in a Wild Bird Population Marta Szulkin and Ben C. Sheldon PMCID: PMC2001187 Biological Stoichiometry in Human Cancer James J. Elser, Marcia M. Kyle, Marilyn S. Smith, and John D. Nagy PMCID: PMC2000353 Procollagen Triple Helix Assembly: An Unconventional Chaperone-Assisted Folding Paradigm Elena Makareeva and Sergey Leikin PMCID: PMC2000351 An In Vitro Model for Lewy Body-Like Hyaline Inclusion/Astrocytic Hyaline Inclusion: Induction by ER Stress with an ALS-Linked SOD1 Mutation Satoru Yamagishi, Yoshihisa Koyama, Taiichi Katayama, Manabu Taniguchi, Junichi Hitomi, Masaaki Kato, Masashi Aoki, Yasuto Itoyama, Shinsuke Kato, and Masaya Tohyama PMCID: PMC2000355 Wnt and TGF-β Expression in the Sponge Amphimedon queenslandica and the Origin of Metazoan Embryonic Patterning Maja Adamska, Sandie M. Degnan, Kathryn M. Green, Marcin Adamski, Alina Craigie, Claire Larroux, and Bernard M. Degnan PMCID: PMC2000352 Tumor Suppressor CYLD Acts as a Negative Regulator for Non-Typeable Haemophilus influenza-Induced Inflammation in the Middle Ear and Lung of Mice Jae Hyang Lim, Hirofumi Jono, Tomoaki Koga, Chang-Hoon Woo, Hajime Ishinaga, Patricia Bourne, Haodong Xu, Un-Hwan Ha, Haidong Xu, and Jian-Dong Li PMCID: PMC2001183 Phenotypic Studies of Natural Killer Cell Subsets in Human Transporter Associated with Antigen Processing Deficiency Jacques Zimmer, Huguette Bausinger, Emmanuel Andrès, Lionel Donato, Daniel Hanau, François Hentges, Alessandro Moretta, and Henri de la Salle PMCID: PMC2001180 Application of Modified Shell Vial Culture Procedure for Arbovirus Detection Edna R. Caceda and Tadeusz J. Kochel PMCID: PMC2013940 Assembly of Inflammation-Related Genes for Pathway-Focused Genetic Analysis Matthew J. Loza, Charles E. McCall, Liwu Li, William B. Isaacs, Jianfeng Xu, and Bao-Li Chang PMCID: PMC2001184 A Simple Method for Combining Genetic Mapping Data from Multiple Crosses and Experimental Designs Jeremy L. Peirce, Karl W. Broman, Lu Lu, and Robert W. Williams PMCID: PMC2001185 Proprioceptive Movement Illusions Due to Prolonged Stimulation: Reversals and Aftereffects Tatjana Seizova-Cajic, Janette L. Smith, Janet L. Taylor, and Simon C. Gandevia PMCID: PMC2001181 Severe Respiratory Syncytial Virus Bronchiolitis in Infants Is Associated with Reduced Airway Interferon Gamma and Substance P Malcolm G. Semple, Hinke M. Dankert, Bahram Ebrahimi, Jailson B. Correia, J. Angela Booth, James P. Stewart, Rosalind L. Smyth, and C. Anthony Hart PMCID: PMC2001182 Dynamic Surface Activity of a Fully Synthetic Phospholipase-Resistant Lipid/Peptide Lung Surfactant Frans J. Walther, Alan J. Waring, Jose M. Hernandez-Juviel, Larry M. Gordon, Adrian L. Schwan, Chun-Ling Jung, Yusuo Chang, Zhengdong Wang, and Robert H. Notter PMCID: PMC2013942 A Televised, Web-Based Randomised Trial of an Herbal Remedy (Valerian) for Insomnia Andrew D. Oxman, Signe Flottorp, Kari Håvelsrud, Atle Fretheim, Jan Odgaard-Jensen, Astrid Austvoll-Dahlgren, Cheryl Carling, Ståle Pallesen, and Bjørn Bjorvatn PMCID: PMC2002515 Small-Scale Fisheries Bycatch Jeopardizes Endangered Pacific Loggerhead Turtles S. Hoyt Peckham, David Maldonado Diaz, Andreas Walli, Georgita Ruiz, Larry B. Crowder, and Wallace J. Nichols PMCID: PMC2002513 Preventing Establishment: An Inventory of Introduced Plants in Puerto Villamil, Isabela Island, Galapagos Anne Guézou, Paola Pozo, and Christopher Buddenhagen PMCID: PMC2002516 Proprotein Convertase Subtilisin/Kexin Type 9 (PCSK9) Gene Is a Risk Factor of Large-Vessel Atherosclerosis Stroke Shérine Abboud, Pekka J. Karhunen, Dieter Lütjohann, Sirkka Goebeler, Teemu Luoto, Silvia Friedrichs, Terho Lehtimaki, Massimo Pandolfo, and Reijo Laaksonen PMCID: PMC2002510 Complement C3d Conjugation to Anthrax Protective Antigen Promotes a Rapid, Sustained, and Protective Antibody Response Ravi V. Kolla, Suresh Chintalapati, Mojgan Sabet, Eugenio Santelli, Robert C. Liddington, Michael David, Joshua Fierer, Donald Guiney, and Robert C. Rickert PMCID: PMC2001179 Impact of a Plasmodium falciparum AMA1 Vaccine on Antibody Responses in Adult Malians Alassane Dicko, David J. Diemert, Issaka Sagara, Moussa Sogoba, Mohamed B. Niambele, Mahamadoun H. Assadou, Ousmane Guindo, Beh Kamate, Mounirou Baby, Mady Sissoko, Elissa M. Malkin, Michael P. Fay, Mahamadou A. Thera, Kazutoyo Miura, Amagana Dolo, Dapa A. Diallo, Gregory E. Mullen, Carole A. Long, Allan Saul, Ogobara Doumbo, and Louis H. Miller PMCID: PMC2013939 Site-Directed Mutations in the C-Terminal Extension of Human αB-Crystallin Affect Chaperone Function and Block Amyloid Fibril Formation Teresa M. Treweek, Heath Ecroyd, Danielle M. Williams, Sarah Meehan, John A. Carver, and Mark J. Walker PMCID: PMC2002509 Module-Based Outcome Prediction Using Breast Cancer Compendia Martin H. van Vliet, Christiaan N. Klijn, Lodewyk F. A. Wessels, and Marcel J. T. Reinders PMCID: PMC2002511 Murine Gammaherpesvirus-68 Inhibits Antigen Presentation by Dendritic Cells Christopher M. Smith, Michael B. Gill, Janet S. May, and Philip G. Stevenson PMCID: PMC2002512 Identification and Classification of Hubs in Brain Networks Olaf Sporns, Christopher J. Honey, and Rolf Kötter PMCID: PMC2013941 Gene Expression Signature in Peripheral Blood Detects Thoracic Aortic Aneurysm Yulei Wang, Catalin C. Barbacioru, Dov Shiffman, Sriram Balasubramanian, Olga Iakoubova, Maryann Tranquilli, Gonzalo Albornoz, Julie Blake, Necip N. Mehmet, Dewi Ngadimo, Karen Poulter, Frances Chan, Raymond R. Samaha, and John A. Elefteriades PMCID: PMC2002514 Ankyrin-B Syndrome: Enhanced Cardiac Function Balanced by Risk of Cardiac Death and Premature Senescence Peter J. Mohler, Jane A. Healy, Hui Xue, Annibale A. Puca, Crystal F. Kline, R. Rand Allingham, Evangelia G. Kranias, Howard A. Rockman, and Vann Bennett PMCID: PMC2013943 Boosting BCG with Recombinant Modified Vaccinia Ankara Expressing Antigen 85A: Different Boosting Intervals and Implications for Efficacy Trials Ansar A. Pathan, Clare R. Sander, Helen A. Fletcher, Ian Poulton, Nicola C. Alder, Natalie E. R. Beveridge, Kathryn T. Whelan, Adrian V. S. Hill, and Helen McShane PMCID: PMC2034536 Turing Patterns Inside Cells Damián E. Strier and Silvina Ponce Dawson PMCID: PMC2013944 The Origins of Novel Protein Interactions during Animal Opsin Evolution David C. Plachetzki, Bernard M. Degnan, and Todd H. 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Chen, Nissim Hay, Kazuyuki Tobe, Takashi Kadowaki, Yoshiaki Azuma, Sakae Tanaka, Kozo Nakamura, Ung-il Chung, and Hiroshi Kawaguchi PMCID: PMC2020440 Dysconnection Topography in Schizophrenia Revealed with State-Space Analysis of EEG Mahdi Jalili, Suzie Lavoie, Patricia Deppen, Reto Meuli, Kim Q. Do, Michel Cuénod, Martin Hasler, Oscar De Feo, and Maria G. Knyazeva PMCID: PMC2020441 Illusory Stimuli Can Be Used to Identify Retinal Blind Spots Michael D. Crossland, Steven C. Dakin, and Peter J. Bex PMCID: PMC2020442 Cell Cycle Genes Are the Evolutionarily Conserved Targets of the E2F4 Transcription Factor Caitlin M. Conboy, Christiana Spyrou, Natalie P. Thorne, Elizabeth J. Wade, Nuno L. Barbosa-Morais, Michael D. Wilson, Arindam Bhattacharjee, Richard A. Young, Simon Tavaré, Jacqueline A. Lees, and Duncan T. 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Richie PMCID: PMC2031826 Microarray Analysis in the Archaeon Halobacterium salinarum Strain R1 Jens Twellmeyer, Andy Wende, Jan Wolfertz, Friedhelm Pfeiffer, Markus Panhuysen, Alexander Zaigler, Jörg Soppa, Gerhard Welzl, and Dieter Oesterhelt PMCID: PMC2020435 Ancestral Inference and the Study of Codon Bias Evolution: Implications for Molecular Evolutionary Analyses of the Drosophila melanogaster Subgroup Hiroshi Akashi, Piyush Goel, and Anoop John PMCID: PMC2020436 Hsp90 Inhibition Decreases Mitochondrial Protein Turnover Daciana H. Margineantu, Christine B. Emerson, Dolores Diaz, and David M. Hockenbery PMCID: PMC2031825 K13 Blocks KSHV Lytic Replication and Deregulates vIL6 and hIL6 Expression: A Model of Lytic Replication Induced Clonal Selection in Viral Oncogenesis Jinshun Zhao, Vasu Punj, Hittu Matta, Lucia Mazzacurati, Sandra Schamus, Yanqiang Yang, Tianbing Yang, Yan Hong, and Preethello M. Chaudhary PMCID: PMC2020437 How Emotion Strengthens the Recollective Experience: A Time-Dependent Hippocampal Process Tali Sharot, Mieke Verfaellie, and Andrew P. Yonelinas PMCID: PMC2031918 Direct Detection of Soil-Bound Prions Sacha Genovesi, Liviana Leita, Paolo Sequi, Igino Andrighetto, M. Catia Sorgato, and Alessandro Bertoli PMCID: PMC2031919 Growth Environment and Sex Differences in Lipids, Body Shape and Diabetes Risk C. Mary Schooling, Tai Hing Lam, G. Neil Thomas, Benjamin J. Cowling, Michelle Heys, Edward D. Janus, Gabriel M. Leung, and for the Hong Kong Cardiovascular Risk Factor Prevalence Study Steering Committee PMCID: PMC2031823 Therapeutic Effect of a Poly(ADP-Ribose) Polymerase-1 Inhibitor on Experimental Arthritis by Downregulating Inflammation and Th1 Response Elena Gonzalez-Rey, Ruben Martínez-Romero, Francisco O'Valle, Rocío Aguilar-Quesada, Carmen Conde, Mario Delgado, and F. Javier Oliver PMCID: PMC2034533 Properties of the Force Exerted by Filopodia and Lamellipodia and the Involvement of Cytoskeletal Components Dan Cojoc, Francesco Difato, Enrico Ferrari, Rajesh B. Shahapure, Jummi Laishram, Massimo Righi, Enzo M. Di Fabrizio, and Vincent Torre PMCID: PMC2034605 High Speed Two-Photon Imaging of Calcium Dynamics in Dendritic Spines: Consequences for Spine Calcium Kinetics and Buffer Capacity L. Niels Cornelisse, Ronald A. J. van Elburg, Rhiannon M. Meredith, Rafael Yuste, and Huibert D. Mansvelder PMCID: PMC2034355 A Mutation in MRH2 Kinesin Enhances the Root Hair Tip Growth Defect Caused by Constitutively Activated ROP2 Small GTPase in Arabidopsis Guohua Yang, Peng Gao, Hua Zhang, Shanjin Huang, and Zhi-Liang Zheng PMCID: PMC2031828 A Near-Infrared Cell Tracker Reagent for Multiscopic In Vivo Imaging and Quantification of Leukocyte Immune Responses Filip K. Swirski, Cedric R. Berger, Jose-Luiz Figueiredo, Thorsten R. Mempel, Ulrich H. von Andrian, Mikael J. Pittet, and Ralph Weissleder PMCID: PMC2034600 Phylogenetic Analysis of the Neks Reveals Early Diversification of Ciliary-Cell Cycle Kinases Jeremy D. K. Parker, Brian A. Bradley, Arne O. Mooers, and Lynne M. Quarmby PMCID: PMC2031824 Optimal Signal Processing in Small Stochastic Biochemical Networks Etay Ziv, Ilya Nemenman, and Chris H. Wiggins PMCID: PMC2034356 Optimized Protein Extraction for Quantitative Proteomics of Yeasts Tobias von der Haar PMCID: PMC2031916 Mast Fruiting Is a Frequent Strategy in Woody Species of Eastern South America Natalia Norden, Jérôme Chave, Pierre Belbenoit, Adeline Caubère, Patrick Châtelet, Pierre-Michel Forget, and Christophe Thébaud PMCID: PMC2031917 HIV-1/HSV-2 Co-Infected Adults in Early HIV-1 Infection Have Elevated CD4+ T Cell Counts Jason D. Barbour, Mariana M. Sauer, Elizabeth R. Sharp, Keith E. Garrison, Brian R. Long, Helena Tomiyama, Katia C. Bassichetto, Solange M. Oliveira, Maria C. Abbate, Douglas F. Nixon, and Esper G. Kallas PMCID: PMC2031920 Different Transcript Patterns in Response to Specialist and Generalist Herbivores in the Wild Arabidopsis Relative Boechera divaricarpa Heiko Vogel, Juergen Kroymann, and Thomas Mitchell-Olds PMCID: PMC2031921 Conformational Reorganization of the SARS Coronavirus Spike Following Receptor Binding: Implications for Membrane Fusion Daniel R. Beniac, Shauna L. deVarennes, Anton Andonov, Runtao He, and Tim F. Booth PMCID: PMC2034598 Analysis of the Trajectory of Drosophila melanogaster in a Circular Open Field Arena Dan Valente, Ilan Golani, and Partha P. Mitra PMCID: PMC2031922 Direct and Indirect Induction of a Compensatory Phenotype that Alleviates the Costs of an Inducible Defense Tadashi Iwami, Osamu Kishida, and Kinya Nishimura PMCID: PMC2040518 Nitric Oxide Destabilizes Pias3 and Regulates Sumoylation Jing Qu, Guang-Hui Liu, Kaiyuan Wu, Peiwei Han, Peng Wang, Jiangmei Li, Xu Zhang, and Chang Chen PMCID: PMC2064872 Selection at the Y Chromosome of the African Buffalo Driven by Rainfall Pim van Hooft, Barend J. Greyling, Herbert H. T. Prins, Wayne M. Getz, Anna E. Jolles, and Armanda D. S. Bastos PMCID: PMC2034602 Basonuclin-Null Mutation Impairs Homeostasis and Wound Repair in Mouse Corneal Epithelium Xiaohong Zhang and Hung Tseng PMCID: PMC2034529 Chloroquine Resistant Plasmodium vivax: In Vitro Characterisation and Association with Molecular Polymorphisms Rossarin Suwanarusk, Bruce Russell, Marina Chavchich, Ferryanto Chalfein, Enny Kenangalem, Varakorn Kosaisavee, Budi Prasetyorini, Kim A. Piera, Marion Barends, Alan Brockman, Usa Lek-Uthai, Nicholas M. Anstey, Emiliana Tjitra, François Nosten, Qin Cheng, and Ric N. Price PMCID: PMC2034531 Improved Success of Sparse Matrix Protein Crystallization Screening with Heterogeneous Nucleating Agents Anil S. Thakur, Gautier Robin, Gregor Guncar, Neil F. W. Saunders, Janet Newman, Jennifer L. Martin, and Bostjan Kobe PMCID: PMC2034409 Biosynthesis of Vitamin C by Yeast Leads to Increased Stress Resistance Paola Branduardi, Tiziana Fossati, Michael Sauer, Roberto Pagani, Diethard Mattanovich, and Danilo Porro PMCID: PMC2034532 SiDCoN: A Tool to Aid Scoring of DNA Copy Number Changes in SNP Chip Data Derek J. Nancarrow, Herlina Y. Handoko, Mitchell S. Stark, David C. Whiteman, and Nicholas K. Hayward PMCID: PMC2034603 A Blueprint for Real-Time Functional Mapping via Human Intracranial Recordings Jean-Philippe Lachaux, Karim Jerbi, Olivier Bertrand, Lorella Minotti, Dominique Hoffmann, Benjamin Schoendorff, and Philippe Kahane PMCID: PMC2040217 Significant and Systematic Expression Differentiation in Long-Lived Yeast Strains Chao Cheng, Paola Fabrizio, Huanying Ge, Min Wei, Valter D. Longo, and Lei M. Li PMCID: PMC2039703 Honokiol Induces Calpain-Mediated Glucose-Regulated Protein-94 Cleavage and Apoptosis in Human Gastric Cancer Cells and Reduces Tumor Growth Meei Ling Sheu, Shing Hwa Liu, and Keng Hsin Lan PMCID: PMC2034534 Horizontal Transfer of a Nitrate Assimilation Gene Cluster and Ecological Transitions in Fungi: A Phylogenetic Study Jason C. Slot and David S. Hibbett PMCID: PMC2040219 Evidence for Positive Selection in the C-terminal Domain of the Cholesterol Metabolism Gene PCSK9 Based on Phylogenetic Analysis in 14 Primate Species Keyue Ding, Samantha J. McDonough, and Iftikhar J. Kullo PMCID: PMC2034530 An RNA Polymerase III-Dependent Heterochromatin Barrier at Fission Yeast Centromere 1 Kristin C. Scott, Caroline V. White, and Huntington F. Willard PMCID: PMC2040200 Solar Disinfection of MODS Mycobacterial Cultures in Resource-Poor Settings Ruvandhi Nathavitharana, Jorge Coronel, and David A. J. Moore PMCID: PMC2042512 A Randomised Controlled Trial to Assess the Efficacy of Dihydroartemisinin-Piperaquine for the Treatment of Uncomplicated Falciparum Malaria in Peru Tanilu Grande, Andrea Bernasconi, Annette Erhart, Dioni Gamboa, Martin Casapia, Christopher Delgado, Kathy Torres, Caterina Fanello, Alejandro Llanos-Cuentas, and Umberto D'Alessandro PMCID: PMC2040506 Expression of TLR-2, TLR-4, NOD2 and pNF-κB in a Neonatal Rat Model of Necrotizing Enterocolitis Aurelie Le Mandat Schultz, Arnaud Bonnard, Frédérick Barreau, Yves Aigrain, Coralie Pierre-Louis, Dominique Berrebi, and Michel Peuchmaur PMCID: PMC2040507 Mathematical Identification of Critical Reactions in the Interlocked Feedback Model Hiroyuki Kurata, Takayuki Tanaka, and Fumitaka Ohnishi PMCID: PMC2040204 Prognostic Value of Posteromedial Cortex Deactivation in Mild Cognitive Impairment Jeffrey R. Petrella, Steven E. Prince, Lihong Wang, Caroline Hellegers, and P. Murali Doraiswamy PMCID: PMC2040216 Pilocarpine-Induced Status Epilepticus in Rats Involves Ischemic and Excitotoxic Mechanisms Paolo Francesco Fabene, Flavia Merigo, Mirco Galiè, Donatella Benati, Paolo Bernardi, Paolo Farace, Elena Nicolato, Pasquina Marzola, and Andrea Sbarbati PMCID: PMC2040510 Chemical Magnetoreception: Bird Cryptochrome 1a Is Excited by Blue Light and Forms Long-Lived Radical-Pairs Miriam Liedvogel, Kiminori Maeda, Kevin Henbest, Erik Schleicher, Thomas Simon, Christiane R. Timmel, P. J. Hore, and Henrik Mouritsen PMCID: PMC2040520 The LARK RNA-Binding Protein Selectively Regulates the Circadian Eclosion Rhythm by Controlling E74 Protein Expression Yanmei Huang, Ginka Genova, Mary Roberts, and F. Rob Jackson PMCID: PMC2040218 Comparing Natural and Constrained Movements: New Insights into the Visuomotor Control of Grasping Chiara Begliomini, Andrea Caria, Wolfgang Grodd, and Umberto Castiello PMCID: PMC2040199 Underestimation of Species Richness in Neotropical Frogs Revealed by mtDNA Analyses Antoine Fouquet, André Gilles, Miguel Vences, Christian Marty, Michel Blanc, and Neil J. Gemmell PMCID: PMC2040503 The Novel CXCL12γ Isoform Encodes an Unstructured Cationic Domain Which Regulates Bioactivity and Interaction with Both Glycosaminoglycans and CXCR4 Cédric Laguri, Rabia Sadir, Patricia Rueda, Françoise Baleux, Pierre Gans, Fernando Arenzana-Seisdedos, and Hugues Lortat-Jacob PMCID: PMC2040504 A Step Towards Seascape Scale Conservation: Using Vessel Monitoring Systems (VMS) to Map Fishing Activity Matthew J. Witt and Brendan J. Godley PMCID: PMC2040201 Targeting Thioredoxin Reductase 1 Reduction in Cancer Cells Inhibits Self-Sufficient Growth and DNA Replication Min-Hyuk Yoo, Xue-Ming Xu, Bradley A. Carlson, Andrew D. Patterson, Vadim N. Gladyshev, and Dolph L. Hatfield PMCID: PMC2040202 Rampant Adaptive Evolution in Regions of Proteins with Unknown Function in Drosophila simulans Alisha K. Holloway and David J. Begun PMCID: PMC2040203 Treating Cancer as an Infectious Disease—Viral Antigens as Novel Targets for Treatment and Potential Prevention of Tumors of Viral Etiology Xing Guo Wang, Ekaterina Revskaya, Ruth A. Bryan, Howard D. Strickler, Robert D. Burk, Arturo Casadevall, and Ekaterina Dadachova PMCID: PMC2040508 The p11/S100A10 Light Chain of Annexin A2 Is Dispensable for Annexin A2 Association to Endosomes and Functions in Endosomal Transport Etienne Morel and Jean Gruenberg PMCID: PMC2040519 Creating Physical 3D Stereolithograph Models of Brain and Skull Daniel J. Kelley, Mohammed Farhoud, M. Elizabeth Meyerand, David L. Nelson, Lincoln F. Ramirez, Robert J. Dempsey, Alan J. Wolf, Andrew L. Alexander, and Richard J. Davidson PMCID: PMC2040197 Molecular Correlates of Host Specialization in Staphylococcus aureus Lisa Herron-Olson, J. Ross Fitzgerald, James M. Musser, and Vivek Kapur PMCID: PMC2040198 Exceptionally Preserved Jellyfishes from the Middle Cambrian Paulyn Cartwright, Susan L. Halgedahl, Jonathan R. Hendricks, Richard D. Jarrard, Antonio C. Marques, Allen G. Collins, and Bruce S. Lieberman PMCID: PMC2040521 |
