| | This journal provides immediate access to some articles. Accelerated Communication Mechanically unfolding proteins: The effect of unfolding history and the supramolecular scaffold Rebecca C. Zinober, David J. Brockwell, Godfrey S. Beddard, Anthony W. Blake, Peter D. Olmsted, Sheena E. Radford, and D. Alastair Smith PMCID: PMC2373742 Articles Long membrane helices and short loops predicted less accurately Chien Peter Chen and Burkhard Rost PMCID: PMC2373740 Transmembrane helix predictions revisited Chien Peter Chen, Andrew Kernytsky, and Burkhard Rost PMCID: PMC2373751 The interaction of β2-glycoprotein I domain V with chaperonin GroEL: The similarity with the domain V and membrane interaction Masayo Gozu, Masaru Hoshino, Takashi Higurashi, Hisao Kato, and Yuji Goto PMCID: PMC2373745 Thoroughly sampling sequence space: Large-scale protein design of structural ensembles Stefan M. Larson, Jeremy L. England, John R. Desjarlais, and Vijay S. Pande PMCID: PMC2373757 Rapid protein domain assignment from amino acid sequence using predicted secondary structure Russell L. Marsden, Liam J. McGuffin, and David T. Jones PMCID: PMC2373756 Definition of the tempo of sequence diversity across an alignment and automatic identification of sequence motifs: Application to protein homologous families and superfamilies Alex C.W. May PMCID: PMC2373737 Sequence conserved for subcellular localization Rajesh Nair and Burkhard Rost PMCID: PMC2373743 Quantitative chimeric analysis of six specificity determinants that differentiate Escherichia coli aspartate from tyrosine aminotransferase Wendy A. Shaffer, Tinh N. Luong, Steven C. Rothman, and Jack F. Kirsch PMCID: PMC2373746 Side-chain conformational entropy at protein–protein interfaces Christian Cole and Jim Warwicker PMCID: PMC2373749 Extension of a local backbone description using a structural alphabet: A new approach to the sequence-structure relationship Alexandre G. de Brevern, Hélène Valadié, Serge Hazout, and Catherine Etchebest PMCID: PMC2373739 Crystal structure of a major secreted protein of Mycobacterium tuberculosis—MPT63 at 1.5-Å resolution Celia W. Goulding, Angineh Parseghian, Michael R. Sawaya, Duilio Cascio, Marcin I. Apostol, Maria Laura Gennaro, and David Eisenberg PMCID: PMC2373750 Prediction of novel archaeal enzymes from sequence-derived features Lars Juhl Jensen, Marie Skovgaard, and Søren Brunak PMCID: PMC2373754 Modifying specificity of antidigoxin antibodies using insertional mutagenesis Rustem A. Krykbaev, Panayota Tsantili, Philip D. Jeffrey, and Michael N. Margolies PMCID: PMC2373741 Regulatory implications of a novel mode of interaction of calmodulin with a double IQ-motif target sequence from murine dilute myosin V Stephen R. Martin and Peter M. Bayley PMCID: PMC2373755 Crystal structures and increased stabilization of the protein G variants with switched folding pathways NuG1 and NuG2 Sehat Nauli, Brian Kuhlman, Isolde Le Trong, Ronald E. Stenkamp, David Teller, and David Baker PMCID: PMC2373753 Partly folded states of members of the lysozyme/lactalbumin superfamily: A comparative study by circular dichroism spectroscopy and limited proteolysis Patrizia Polverino de Laureto, Erica Frare, Rossella Gottardo, Herman van Dael, and Angelo Fontana PMCID: PMC2373748 Metal ions and phosphate binding in the H-N-H motif: Crystal structures of the nuclease domain of ColE7/Im7 in complex with a phosphate ion and different divalent metal ions Meng-Jiun Sui, Li-Chu Tsai, Kuo-Chiang Hsia, Lyudmila G. Doudeva, Wen-Yen Ku, Gye Won Han, and Hanna S. Yuan PMCID: PMC2373744 Cloning, overexpression, and characterization of a bacterial Ca2+-dependent phospholipase D Hongying Yang and Mary F. Roberts PMCID: PMC2373738 For the Record Redox-dependent structural changes in archaeal and bacterial Rieske-type [2Fe-2S] clusters Nathaniel J. Cosper, D. Matthew Eby, Asako Kounosu, Norio Kurosawa, Ellen L. Neidle, Donald M. Kurtz, JR., Toshio Iwasaki, and Robert A. Scott PMCID: PMC2373747 Prediction of partial membrane protein topologies using a consensus approach Johan Nilsson, Bengt Persson, and Gunnar von Heijne PMCID: PMC2373752 |
