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Volume 2(8);  August 2006
Editorial
One Year of PLoS Computational Biology
Philip E Bourne
PLoS Comput Biol. 2006 August; 2(8): e111. Published online 2006 August 25. doi: 10.1371/journal.pcbi.0020111.
PMCID: PMC1553486
Message from ISCB
ISCB Honors Michael S. Waterman and Mathieu Blanchette
Merry Maisel
PLoS Comput Biol. 2006 August; 2(8): e105. Published online 2006 August 4. doi: 10.1371/journal.pcbi.0020105.
PMCID: PMC1526462
Review
The Ion Channel Inverse Problem: Neuroinformatics Meets Biophysics
Robert C Cannon and Giampaolo D'Alessandro
PLoS Comput Biol. 2006 August; 2(8): e91. Published online 2006 August 25. doi: 10.1371/journal.pcbi.0020091.
PMCID: PMC1553477
Research Articles
An Integrative Method for Accurate Comparative Genome Mapping
Firas Swidan, Eduardo P. C Rocha, Michael Shmoish, and Ron Y Pinter
PLoS Comput Biol. 2006 August; 2(8): e75. Prepublished online 2006 May 15. Published online 2006 August 4. doi: 10.1371/journal.pcbi.0020075.
PMCID: PMC1526463
Intrinsic Disorder Is a Common Feature of Hub Proteins from Four Eukaryotic Interactomes
Chad Haynes, Christopher J Oldfield, Fei Ji, Niels Klitgord, Michael E Cusick, Predrag Radivojac, Vladimir N Uversky, Marc Vidal, and Lilia M Iakoucheva
PLoS Comput Biol. 2006 August; 2(8): e100. Prepublished online 2006 June 23. Published online 2006 August 4. doi: 10.1371/journal.pcbi.0020100.
PMCID: PMC1526461
Matrix Formalism to Describe Functional States of Transcriptional Regulatory Systems
Erwin P Gianchandani, Jason A Papin, Nathan D Price, Andrew R Joyce, and Bernhard O Palsson
PLoS Comput Biol. 2006 August; 2(8): e101. Published online 2006 August 11. doi: 10.1371/journal.pcbi.0020101.
PMCID: PMC1534074
Insights into the Coupling of Duplication Events and Macroevolution from an Age Profile of Animal Transmembrane Gene Families
Guohui Ding, Jiuhong Kang, Qi Liu, Tieliu Shi, Gang Pei, and Yixue Li
PLoS Comput Biol. 2006 August; 2(8): e102. Prepublished online 2006 June 26. Published online 2006 August 11. doi: 10.1371/journal.pcbi.0020102.
PMCID: PMC1534073
Transient Resetting: A Novel Mechanism for Synchrony and Its Biological Examples
Chunguang Li, Luonan Chen, and Kazuyuki Aihara
PLoS Comput Biol. 2006 August; 2(8): e103. Prepublished online 2006 June 26. Published online 2006 August 4. doi: 10.1371/journal.pcbi.0020103.
PMCID: PMC1526460
Conservation of Expression and Sequence of Metabolic Genes Is Reflected by Activity Across Metabolic States
Yonatan Bilu, Tomer Shlomi, Naama Barkai, and Eytan Ruppin
PLoS Comput Biol. 2006 August; 2(8): e106. Prepublished online 2006 July 6. Published online 2006 August 18. doi: 10.1371/journal.pcbi.0020106.
PMCID: PMC1550272
Modeling Somatic Evolution in Tumorigenesis
Sabrina L Spencer, Ryan A Gerety, Kenneth J Pienta, and Stephanie Forrest
PLoS Comput Biol. 2006 August; 2(8): e108. Published online 2006 August 18. doi: 10.1371/journal.pcbi.0020108.
PMCID: PMC1550273
High Epitope Expression Levels Increase Competition between T Cells
Almut Scherer, Marcel Salathé, and Sebastian Bonhoeffer
PLoS Comput Biol. 2006 August; 2(8): e109. Prepublished online 2006 July 12. Published online 2006 August 18. doi: 10.1371/journal.pcbi.0020109.
PMCID: PMC1550274
Expansion of Protein Domain Repeats
Åsa K Björklund, Diana Ekman, and Arne Elofsson
PLoS Comput Biol. 2006 August; 2(8): e114. Prepublished online 2006 July 14. Published online 2006 August 25. doi: 10.1371/journal.pcbi.0020114.
PMCID: PMC1553488
Correction
Correction: Systematic Analysis of Head-to-Head Gene Organization: Evolutionary Conservation and Potential Biological Relevance
Yuan-Yuan Li, Hui Yu, Zong-Ming Guo, Ting-Qing Guo, Kang Tu, and Yi-Xue Li
PLoS Comput Biol. 2006 August; 2(8): e112. Published online 2006 August 25. doi: 10.1371/journal.pcbi.0020112.
PMCID: PMC1553487
Corrects: Yuan-Yuan Li, et al. Systematic Analysis of Head-to-Head Gene Organization: Evolutionary Conservation and Potential Biological Relevance. PLoS Comput Biol. 2006 July; 2(7): e74.
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