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Volume 13(1);  January 2007
Bioinformatics
KISS: The kinetoplastid RNA editing sequence search tool
Torsten Ochsenreiter, Michael Cipriano, and Stephen L. Hajduk
RNA. 2007 January; 13(1): 1–4. doi: 10.1261/rna.232907.
PMCID: PMC1705751
Spliceosomal small nuclear RNA genes in 11 insect genomes
Stephen M. Mount, Valer Gotea, Chiao-Feng Lin, Kristina Hernandez, and Wojciech Makałowski
RNA. 2007 January; 13(1): 5–14. doi: 10.1261/rna.259207.
PMCID: PMC1705759
Report
A present-day aminoacyl-tRNA synthetase with ancestral editing properties
Bin Zhu, Ming-Wei Zhao, Gilbert Eriani, and En-Duo Wang
RNA. 2007 January; 13(1): 15–21. doi: 10.1261/rna.228707.
PMCID: PMC1705749
Articles
Conversion of pre-RISC to holo-RISC by Ago2 during assembly of RNAi complexes
Kevin Kim, Young Sik Lee, and Richard W. Carthew
RNA. 2007 January; 13(1): 22–29. doi: 10.1261/rna.283207.
PMCID: PMC1705758
Identification of novel snRNA-specific Sm proteins that bind selectively to U2 and U4 snRNAs in Trypanosoma brucei
Itai Dov Tkacz, Yaniv Lustig, Michael Zeev Stern, Moshe Biton, Mali Salmon-Divon, Anish Das, Vivian Bellofatto, and Shulamit Michaeli
RNA. 2007 January; 13(1): 30–43. doi: 10.1261/rna.174307.
PMCID: PMC1705756
Examination of the folding pathway of the antigenomic hepatitis delta virus ribozyme reveals key interactions of the L3 loop
Cédric Reymond, Jonathan Ouellet, Martin Bisaillon, and Jean-Pierre Perreault
RNA. 2007 January; 13(1): 44–54. doi: 10.1261/rna.263407.
PMCID: PMC1705753
The CRM domain: An RNA binding module derived from an ancient ribosome-associated protein
Alice Barkan, Larik Klipcan, Oren Ostersetzer, Tetsuya Kawamura, Yukari Asakura, and Kenneth P. Watkins
RNA. 2007 January; 13(1): 55–64. doi: 10.1261/rna.139607.
PMCID: PMC1705760
Heterodimerization regulates RNase MRP/RNase P association, localization, and expression of Rpp20 and Rpp25
Tim J.M. Welting, Florence M.A. Peters, Sanne M.M. Hensen, Nienke L. van Doorn, Bastiaan J. Kikkert, Jos M.H. Raats, Walther J. van Venrooij, and Ger J.M. Pruijn
RNA. 2007 January; 13(1): 65–75. doi: 10.1261/rna.237807.
PMCID: PMC1705748
Role of metal ions in the tetraloop–receptor complex as analyzed by NMR
Jared H. Davis, Trenton R. Foster, Marco Tonelli, and Samuel E. Butcher
RNA. 2007 January; 13(1): 76–86. doi: 10.1261/rna.268307.
PMCID: PMC1705752
The frequency of translational misreading errors in E. coli is largely determined by tRNA competition
Emily B. Kramer and Philip J. Farabaugh
RNA. 2007 January; 13(1): 87–96. doi: 10.1261/rna.294907.
PMCID: PMC1705757
Modular evolution and increase of functional complexity in replicating RNA molecules
Susanna C. Manrubia and Carlos Briones
RNA. 2007 January; 13(1): 97–107. doi: 10.1261/rna.203006.
PMCID: PMC1705761
Conformational analysis of the telomerase RNA pseudoknot hairpin by Raman spectroscopy
Vytas Reipa, Gediminas Niaura, and Donald H. Atha
RNA. 2007 January; 13(1): 108–115. doi: 10.1261/rna.182607.
PMCID: PMC1705750
Protein composition of human mRNPs spliced in vitro and differential requirements for mRNP protein recruitment
Christian Merz, Henning Urlaub, Cindy L. Will, and Reinhard Lührmann
RNA. 2007 January; 13(1): 116–128. doi: 10.1261/rna.336807.
PMCID: PMC1705747
Cap- and initiator tRNA-dependent initiation of TYMV polyprotein synthesis by ribosomes: Evaluation of the Trojan horse model for TYMV RNA translation
Daiki Matsuda and Theo W. Dreher
RNA. 2007 January; 13(1): 129–137. doi: 10.1261/rna.244407.
PMCID: PMC1705754
The position of yeast snoRNA-coding regions within host introns is essential for their biosynthesis and for efficient splicing of the host pre-mRNA
Sara Vincenti, Valentina De Chiara, Irene Bozzoni, and Carlo Presutti
RNA. 2007 January; 13(1): 138–150. doi: 10.1261/rna.251907.
PMCID: PMC1705755
Method
Direct and sensitive miRNA profiling from low-input total RNA
Hui Wang, Robert A. Ach, and Bo Curry
RNA. 2007 January; 13(1): 151–159. doi: 10.1261/rna.234507.
PMCID: PMC1705746
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