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Volume 12(2);  February 2006
Letter to the Editor
RAKE and LNA-ISH reveal microRNA expression and localization in archival human brain
PETER T. NELSON, DON A. BALDWIN, WIGARD P. KLOOSTERMAN, SAKARI KAUPPINEN, RONALD H.A. PLASTERK, and ZISSIMOS MOURELATOS
RNA. 2006 February; 12(2): 187–191. doi: 10.1261/rna.2258506.
PMCID: PMC1370897
Bioinformatics
TarBase: A comprehensive database of experimentally supported animal microRNA targets
PRAVEEN SETHUPATHY, BENOIT CORDA, and ARTEMIS G. HATZIGEORGIOU
RNA. 2006 February; 12(2): 192–197. doi: 10.1261/rna.2239606.
PMCID: PMC1370898
Reports
Prp8p dissection reveals domain structure and protein interaction sites
KUM-LOONG BOON, CHRISTINE M. NORMAN, RICHARD J. GRAINGER, ANDREW J. NEWMAN, and JEAN D. BEGGS
RNA. 2006 February; 12(2): 198–205. doi: 10.1261/rna.2281306.
PMCID: PMC1370899
The interaction between DCL1 and HYL1 is important for efficient and precise processing of pri-miRNA in plant microRNA biogenesis
YUKIO KURIHARA, YUASA TAKASHI, and YUICHIRO WATANABE
RNA. 2006 February; 12(2): 206–212. doi: 10.1261/rna.2146906.
PMCID: PMC1370900
Articles
40LoVe interacts with Vg1RBP/Vera and hnRNP I in binding the Vg1-Localization Element
KEVIN CZAPLINSKI and IAIN W. MATTAJ
RNA. 2006 February; 12(2): 213–222. doi: 10.1261/rna.2820106.
PMCID: PMC1370901
Evidence of reciprocal tertiary interactions between conserved motifs involved in organizing RNA structure essential for internal initiation of translation
OLGA FERNÁNDEZ-MIRAGALL, RICARDO RAMOS, JORGE RAMAJO, and ENCARNACIÓN MARTÍNEZ-SALAS
RNA. 2006 February; 12(2): 223–234. doi: 10.1261/rna.2153206.
PMCID: PMC1370902
Structure of a self-splicing group II intron catalytic effector domain 5: Parallels with spliceosomal U6 RNA
MAHADEVAN SEETHARAMAN, NADUKKUDY V. ELDHO, RICHARD A. PADGETT, and KWAKU T. DAYIE
RNA. 2006 February; 12(2): 235–247. doi: 10.1261/rna.2237806.
PMCID: PMC1370903
Protein tagging at rare codons is caused by tmRNA action at the 3′ end of nonstop mRNA generated in response to ribosome stalling
XIA LI, RIEKO HIRANO, HIDEAKI TAGAMI, and HIROJI AIBA
RNA. 2006 February; 12(2): 248–255. doi: 10.1261/rna.2212606.
PMCID: PMC1370904
The antisense strand of small interfering RNAs directs histone methylation and transcriptional gene silencing in human cells
MARC S. WEINBERG, LOUISA M. VILLENEUVE, ALI EHSANI, MOHAMMED AMARZGUIOUI, LARS AAGAARD, ZHAO-XIA CHEN, ARTHUR D. RIGGS, JOHN J. ROSSI, and KEVIN V. MORRIS
RNA. 2006 February; 12(2): 256–262. doi: 10.1261/rna.2235106.
PMCID: PMC1370905
Rrp5p, a trans-acting factor in yeast ribosome biogenesis, is an RNA-binding protein with a pronounced preference for U-rich sequences
PAULO DE BOER, HARMJAN R. VOS, ALEX W. FABER, JAN C. VOS, and HENDRIK A. RAUÉ
RNA. 2006 February; 12(2): 263–271. doi: 10.1261/rna.2257606.
PMCID: PMC1370906
The bunyavirus nucleocapsid protein is an RNA chaperone: Possible roles in viral RNA panhandle formation and genome replication
M. AYOUB MIR and ANTONITO T. PANGANIBAN
RNA. 2006 February; 12(2): 272–282. doi: 10.1261/rna.2101906.
PMCID: PMC1370907
Distinct contributions of KH domains to substrate binding affinity of Drosophila P-element somatic inhibitor protein
NIKOLAS H. CHMIEL, DONALD C. RIO, and JENNIFER A. DOUDNA
RNA. 2006 February; 12(2): 283–291. doi: 10.1261/rna.2175706.
PMCID: PMC1370908
Ubiquitin binding by a variant Jab1/MPN domain in the essential pre-mRNA splicing factor Prp8p
PRIYA BELLARE, ALAN K. KUTACH, AMY K. RINES, CHRISTINE GUTHRIE, and ERIK J. SONTHEIMER
RNA. 2006 February; 12(2): 292–302. doi: 10.1261/rna.2152306.
PMCID: PMC1370909
Recombinant viral RdRps can initiate RNA synthesis from circular templates
C.T. RANJITH-KUMAR and C.C. KAO
RNA. 2006 February; 12(2): 303–312. doi: 10.1261/rna.2163106.
PMCID: PMC1370910
Method
A general two-step strategy to synthesize lariat RNAs
YANGMING WANG and SCOTT K. SILVERMAN
RNA. 2006 February; 12(2): 313–321. doi: 10.1261/rna.2259406.
PMCID: PMC1370911
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