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Year 2003
Hole WT, Srinivasan S. Adding NeuroNames to the UMLS Metathesaurus. Neuroinformatics. 2003; 1 (1):61-63.
(Abstract) (PDF)
Zhang S , Bodenreider O . Aligning Representations of Anatomy Using Lexical and Structural Methods. Proc. AMIA Symposium. 2003 Nov;:753-757.
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Cantor MN, SI N, Hartel F, Bodenreider O, Lussier YA. An Evaluation of Hybrid Methods for Matching Biomedical Terminologies: Mapping the Gene Ontology to the UMLS. Stud Health Technol Inform. 2003;:62-67.
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McCray AT. An Upper Level Ontology for the Biomedical Domain. Comp Funct Genom. 2003;4:80-4.
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Long LR, Antani SK, Thoma GR. A Prototype Content-Based Image Retrieval System for Spine X-Rays. Proc. 16th IEEE Symposium on Computer-Based Medical Systems. 2003 June;: 156-62.
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Walker FL, Thoma GR. A SOAP-Based Tool for User Feedback and Analysis. Proc. InfoToday. 2003 ;: 313-322.
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Le DX, Thoma GR. Automated Document Labeling for Web-Based Online Medical Journals. Proc. 7th World Multiconference on Systemics, Cybernetics and Informatics. 2003 July;II: 411-15.
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Kim J, Le DX, Thoma GR. Automated Labeling Algorithms for Biomedical Document Images. Proc. 7th World Multiconference on Systemics, Cybernetics and Informatics. 2003 July;V: 352-57.
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Kim J, Le DX, Thoma GR. Automated Labeling of Bibliographic Data Extracted from Biomedical Online Journals. Proc. SPIE Electronic Imaging. 2003 Jan;5010: 47-56.
(Abstract) (PDF)
Long LR, Antani S, Lee DJ, Krainak DM, Thoma GR. Biomedical Information from a National Collection of Spine X-Rays: Film to Content-Based Retrieval. Proc. of SPIE Medical Imaging: PACS and Integrated Medical Information Systems. 2003 Feb;5033: 70-84.
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Bodenreider O, Mitchell JA, McCray AT. Biomedical Ontologies. Pacific Symposium on Biocomputing: World Scientific. 2003;:562-564.
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McKnight L, Srinivasan P . Categorization of Sentence Types in Medical Abstracts. Proc. AMIA Symposium. 2003 Nov;:440-444
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Parascandola J. Chaulmoogra Oil and the Treatment of Leprosy. Pharm Hist. 2003 ;45(2):47-57.
(Abstract) (PDF)
Hauser SE, Schlaifer J, Sabir TF, Demner-Fushman D, Thoma GR. Correcting OCR Text by Association with Historic Datasets. Proc. SPIE Electronic Imaging. 2003 Jan;5010: 84-93.
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Ammenwerth E, Wolff AC, Knaup P, Ulmer H, Skonetzki S, Van Bemmel JH, McCray AT, Haux R, Kulikowski C. Developing and Evaluating Criteria to Help Reviewers of Biomedical Informatics Manuscripts: A Case Report. J Am Med Inform Assoc. 2003 June.
(Abstract) (PDF)
Mao S, Rosenfeld A, Kanungo T. Document Structure Analysis Algorithms: A Literature Survey. Proc. SPIE Electronic Imaging. 2003 Jan;5010:197-207.
(Abstract) (PDF)
Antani S, Long LR, Lee DJ, Thoma GR. Evaluation of Shape Indexing Methods for Content-Based Retrieval of X-Ray Images. Proceedings of IS&T/SPIE Electronic Imaging Science and Technology, Storage and Retrieval for Media Databases. 2003 Jan; 5021: 405-16.
(Abstract) (PDF)
Bodenreider O, Burgun A, Mitchell JA. Evaluation of WordNet as a Source of Lay Knowledge for Molecular Biology and Genetic Diseases: A Feasibility Study. Stud Health Technol Inform. 2003;95:379-384.
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Bodenreider O, Pakhomov S. Exploring Adjectival Modification in Biomedical Discourse Across Two Genres. Proc. of the ACL, 2003 Workshop, Natural Language Processing in Biomedicine. 2003;:105-112.
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Tse T, Soergel D. Exploring Medical Expressions Used by Consumers and the Media: An Emerging View of Consumer Health Vocabularies. AMIA Annual Symposium. 2003.
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Bodenreider O , McCray AT . Exploring Semantic Groups Through Visual Approaches . Journal of Biomedical Informatics. 2003;36(6):414-432
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Crandall D, Antani S, Kasturi R. Extraction of Special Effects Caption Text Events from Digital Video. International Journal of Document Analysis and Recognition. 2003;5(2-3):138-57.
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Mitchell JA , McCray AT , Bodenreider O . From Phenotype to Genotype: Issues in Navigating the Available Information Resources . Methods of Information in Medicine. 2003;42(5):557-563.
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Mitchell JA , Aronson AR , Mork JG , Folk LC , Humphrey SM , Ward JM . Gene Indexing: Characterization and Analysis of NLM's GeneRIFs . Proc. AMIA Symposium. 2003 Nov;:460-464.
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Weeber M, Vos R, Klein H, De Jong-Van Den Berg LT, Aronson AR, Molema G. Generating Hypotheses by Discovering Implicit Associations in the Literature: A Case Report of a Search for New Potential Therapeutic Uses for Thalidomide. J Am Med Inform Assoc. ;10(3):252-9.
(Abstract) (PDF) (PMID: 12626374 )
Mao S, Kim J, Le DX, Thoma GR. Generating Robust Features for Style-Independent Labeling of Bibliographic Fields in Medical Journal Articles. Proc. 7th World Multiconference on Systemics, Cybernetics and Informatics.2003 July;III:53-6.
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Bodenreider O , Mitchell JA . Graphical Visualization and Navigation of Genetic Disease Information . Proc. AMIA Symposium. 2003 Nov;:792.
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Ford G, Thoma GR. Ground Truth Data for Document Image Analysis. Proceedings of 2003 Symposium on Document Image Understanding and Technology. 2003 April 9-11;: 199-205.
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Zamora G, Sari-Sarraf H, Long LR. Hierarchical Segmentation of Vertebrae from X-ray Images. Proc. of SPIE Medical Imaging: Image Processing. 2003 Feb; 5032.
(Abstract) (PDF)
McCray AT. Informatics Research, Development, and Training at the Lister Hill National Center for Biomedical Communications. Yearbook of Medical Informatics 03. Stuttgart: Schattauer Verlag. 2003;:193-203.
(Abstract) (PDF)
Fiszman M, Rindflesch TC, Kilicoglu H . Integrating a Hypernymic Proposition Interpreter into a Semantic Processor for Biomedical Texts . Proc. AMIA Symposium. 2003 Nov;:239-243.
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Fiszman M, Rindflesch TC, Kilicoglu H . Interpreting Hypernymic Propositions in an Online Medical Encyclopedia . Proc. AMIA Symposium. 2003 Nov;:840.
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Zhang S , Bodenreider O . Knowledge Augmentation for Aligning Ontologies: An Evaluation in the Biomedical Domain . Proceedings of the Semantic Integration Workshop at the Second International Semantic Web Conference. 2003: 109-114.
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Brown AC , Divita Guy , Aronson AR , McCray AT . Language and Vocabulary Tools. Proc. AMIA Symposium. 2003 Nov;:.
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Ackerman MJ. Laptop or Desktop?. J Med Pract Manage. ;18(6):309-10.
(Abstract) (PDF)
Xu X, Lee DJ, Antani S, Long LR. Localizing Contour Points for Indexing an X-Ray Image Retrieval System. Los Alamitos, CA: IEEE Computer Society. 2003 June;: 169-74.
(Abstract) (PDF)
Rosemblat G, Gemoets D, Browne AC, Tse T. Machine Translation-Supported Cross Language Information Retrieval for a Consumer Health Resource. AMIA Annual Symposium. 2003.
(Abstract) (PDF)
Kayaalp, Mehmet , Aronson, Alan R , Humphrey, Susanne M, Ide, Nicholas C, Tanabe, Lorraine K . Methods for Accurate Retrieval of MEDLINE Citations in Functional Genomics . Proceedings of the Text Retrieval Conference (TREC-2003). 2003;: 175-84.
(Abstract) (PDF)
Lord AM. Models of Masculinity: Sex Education, the United States Public Health Service, and the YMCA, 1919-1924. J Hist Med Allied Sci. 2003 Apr ;58(2):123-52.
(Abstract) (PDF) (PMID: 12776436 )
Hauser SE, Sabir TF, Thoma GR. OCR Correction Using Historical Relationships from Verified Text in Biomedical Citations. Proc. of 2003 Symposium on Document Image Understanding Technology. College Park MD: Institute for Advanced Computer Studies, University of Maryland. 2003 April;: 171-7.
(Abstract) (PDF)
Tse T, Soergel D. Procedures for Mapping Vocabularies from Non-Professional Discourse and a Case Study from the Medical Domain. ASIST Annual Meeting. 2003.
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Leiman D, Twose C, Lee TY, Fletcher A, Yoo T. Rendering an Archive in Three Dimensions. Proceedings of SPIE. 2003;5029.
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McCray AT, Tse Tony. Search Failures in Consumer Health Information Systems. Proc. AMIA Symposium Proceedings. 2003 November; :431-434.
(Abstract) (PDF)
Bodenreider O , Zhang S . Semantic Integration in Biomedicine . Proceedings of the Semantic Integration Workshop at the Second International Semantic Web Conference. 2003;: 156-157.
(Abstract) (PDF)
Rindflesch TC , Libbus B , Hristovski D , Aronson AR , Kilicoglu H . Semantic Relations Asserting the Etiology of Genetic Diseases. Proc. AMIA Symposium. 2003 Nov;:554-558.
(Abstract) (PDF)
Lee DJ, Antani S, Long LR. Similarity Measurement Using Polygon Curve Representation and Fourier Descriptors for Shape-Based Vertebral Image Retrieval. Proc. of SPIE Medical Imaging: Image Processing. 2003;5032(3): 1283-91.
(Abstract) (PDF)
Kanungo T, Mao S. Stochastic Language Model for Style-Directed Physical Layout. Analysis of Documents IEEE Transactions on Image Processing. 2003 May;12 (5)5:583-596.
(Abstract) (PDF)
Bodenreider O. Strength in Numbers: Exploring Redundancy in Hierarchical Relations Across Biomedical Terminologies. Proc. AMIA Symposium. 2003 Nov;101-105:.
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Mitchell JA , McCray AT. The Genetics Home Reference: A New NLM Consumer Health Resource . Proc. AMIA Symposium. 2003 Nov;:936.
(Abstract) (PDF)
Rindflesch TC , Fiszman M . The Interaction of Domain Knowledge and Linguistic Structure in Natural Language Processing: Interpreting Hypernymic Propositions in Biomedical Text. Journal of Biomedical Informatics. 2003;36(6):462-77.
(Abstract) (PDF)
Fontelo P, Ackerman M, Kim G, Locatis C. The PDA as a Portal to Knowledge Sources in a Wireless Setting. Telemed J E Health. 2003 Summer;9(2):141-7.
(Abstract) (PDF) (PMID: 12855037 )
Bangalore A , Thorn KE , Tilley C , Peters L . The UMLS Knowledge Source Server: An Object Model For Delivering UMLS Data. Proc. AMIA Symposium. 2003 Nov;:51-55.
(Abstract) (PDF)
Kashyap V . The UMLS Semantic Network and the Semantic Web . Proc. AMIA Symposium. 2003 Nov;:351-355.
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Ackerman MJ, Yoo T. The Visible Human Data Sets (VHD) and Insight Toolkit (ITk). Proc. AMIA Symposium. Experiments in Open Source Software. 2003 Nov;:773.
(Abstract) (PDF)
Ackerman MJ. The Wireless Internet. J Med Pract Management. 2003.
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Parascandola J. To Bond or Not to Bond: Chemical Versus Physical Theories of Drug Action. Bulletin for the History of Chemistry. 2003;28: 1-8.
(Abstract) (PDF)
Brennan PF, Rindflesch TC. Towards Linking Patients and Clinical Information: Detecting UMLS Concepts in E-mail. J Biomed Inform. 2003 Aug-Oct;36(4-5):334-41
(Abstract) (PDF)
Kashyap V , Ramakrishan C , Rindflesch TC . Towards Semi-Automatic Generation of Biomedical Ontologies. Proc. AMIA Symposium. 2003 Nov;:886.
(Abstract) (PDF)
Antani S, Long LR, Thoma GR, Stanley RJ. Vertebra Shape Classification using MLP for Content-Based Image Retrieval. International Neural Networks Society and IEEE Neural Networks Society. 2003 July 2003;:160-65.
(Abstract) (PDF)
Ratiu P, Hillen B, Glaser J, Jenkins DB. Visible Human 2.0 - The Next Generation. Medicine Meets Virtual Reality 11, J.D. Westwood, et al, ed. IOS Press. 2003;: 275-281.
(Abstract) (PDF)
Locatis C, et al.. Webcasting Videoconferences Over IP: A Synchronous Communication Experiment. J Am Med Inform Assoc. 2003 Mar-Apr;10(2):150-3.
(Abstract) (PDF) (PMID: 12595404 )