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Volume 13(5);  May 2004
Articles
Critical nucleation size in the folding of small apparently two-state proteins
Yawen Bai, Hongyi Zhou, and Yaoqi Zhou
Protein Sci. 2004 May; 13(5): 1173–1181. doi: 10.1110/ps.03587604.
PMCID: PMC2286761
Alteration of the disulfide-coupled folding pathway of BPTI by circular permutation
Grzegorz Bulaj, Rachel E. Koehn, and David P. Goldenberg
Protein Sci. 2004 May; 13(5): 1182–1196. doi: 10.1110/ps.03563704.
PMCID: PMC2286756
Solution structure of Phrixotoxin 1, a specific peptide inhibitor of Kv4 potassium channels from the venom of the theraphosid spider Phrixotrichus auratus
Benjamin Chagot, Pierre Escoubas, Elba Villegas, Cédric Bernard, Gilles Ferrat, Gerardo Corzo, Michel Lazdunski, and Hervé Darbon
Protein Sci. 2004 May; 13(5): 1197–1208. doi: 10.1110/ps.03584304.
PMCID: PMC2286752
Acidophilic adaptation of family 11 endo-β-1,4-xylanases: Modeling and mutational analysis
Frédéric de Lemos Esteves, Virginie Ruelle, Josette Lamotte-Brasseur, Birgit Quinting, and Jean-Marie Frère
Protein Sci. 2004 May; 13(5): 1209–1218. doi: 10.1110/ps.03556104.
PMCID: PMC2286771
Structural and stability effects of phosphorylation: Localized structural changes in phenylalanine hydroxylase
Frederico Faria Miranda, Matthías Thórólfsson, Knut Teigen, Jose M. Sanchez-Ruiz, and Aurora Martínez
Protein Sci. 2004 May; 13(5): 1219–1226. doi: 10.1110/ps.03595904.
PMCID: PMC2286772
The NMR structure of a stable and compact all-β-sheet variant of intestinal fatty acid-binding protein
Benhur Ogbay, Gregory T. Dekoster, and David P. Cistola
Protein Sci. 2004 May; 13(5): 1227–1237. doi: 10.1110/ps.03546204.
PMCID: PMC2286757
Backbone dynamics of complement control protein (CCP) modules reveals mobility in binding surfaces
Joanne M. O'Leary, Krystyna Bromek, Gordon M. Black, Stanislava Uhrinova, Christian Schmitz, Xuefeng Wang, Malgorzata Krych, John P. Atkinson, Dusan Uhrin, and Paul N. Barlow
Protein Sci. 2004 May; 13(5): 1238–1250. doi: 10.1110/ps.03582704.
PMCID: PMC2286753
Stabilization of discordant helices in amyloid fibril-forming proteins
Anna Päiviö, Erik Nordling, Yvonne Kallberg, Johan Thyberg, and Jan Johansson
Protein Sci. 2004 May; 13(5): 1251–1259. doi: 10.1110/ps.03442404.
PMCID: PMC2286751
Structure of fosfomycin resistance protein FosA from transposon Tn2921
Svetlana Pakhomova, Chris L. Rife, Richard N. Armstrong, and Marcia E. Newcomer
Protein Sci. 2004 May; 13(5): 1260–1265. doi: 10.1110/ps.03585004.
PMCID: PMC2286755
Hemoglobin Einstein: Semisynthetic deletion in the B-helix of the α-chain
Sonati Srinivasulu, Belur N. Manjula, Ronald L. Nagel, Ching-Hsuan Tsai, Chien Ho, Muthuchidambaran Prabhakaran, and Seetharama A. Acharya
Protein Sci. 2004 May; 13(5): 1266–1275. doi: 10.1110/ps.03567804.
PMCID: PMC2286774
Solution structures of the C-terminal headpiece subdomains of human villin and advillin, evaluation of headpiece F-actin-binding requirements
Wim Vermeulen, Peter Vanhaesebrouck, Marleen Van Troys, Mieke Verschueren, Franky Fant, Marc Goethals, Christophe Ampe, José C. Martins, and Frans A.M. Borremans
Protein Sci. 2004 May; 13(5): 1276–1287. doi: 10.1110/ps.03518104.
PMCID: PMC2286768
Proteins can convert to β-sheet in single crystals
Run Zheng, Xiaojing Zheng, Jian Dong, and Paul R. Carey
Protein Sci. 2004 May; 13(5): 1288–1294. doi: 10.1110/ps.03550404.
PMCID: PMC2286773
Deciphering the function of an ORF: Salmonella enterica DeoM protein is a new mutarotase specific for deoxyribose
Liliane Assairi, Thomas Bertrand, Joëlle Ferdinand, Neli Slavova-Azmanova, Mette Christensen, Pierre Briozzo, Francis Schaeffer, Constantin T. Craescu, Jan Neuhard, Octavian Bârzu, and Anne-Marie Gilles
Protein Sci. 2004 May; 13(5): 1295–1303. doi: 10.1110/ps.03566004.
PMCID: PMC2286760
Folding mechanism of the (H3–H4)2 histone tetramer of the core nucleosome
Douglas D. Banks and Lisa M. Gloss
Protein Sci. 2004 May; 13(5): 1304–1316. doi: 10.1110/ps.03535504.
PMCID: PMC2286770
Monomer topology defines folding speed of heptamer
Neil Bascos, Jesse Guidry, and Pernilla Wittung-Stafshede
Protein Sci. 2004 May; 13(5): 1317–1321. doi: 10.1110/ps.03559504.
PMCID: PMC2286762
Conformational analysis of HAMLET, the folding variant of human α-lactalbumin associated with apoptosis
Annarita Casbarra, Leila Birolo, Giuseppe Infusini, Fabrizio Dal Piaz, Malin Svensson, Piero Pucci, Catharina Svanborg, and Gennaro Marino
Protein Sci. 2004 May; 13(5): 1322–1330. doi: 10.1110/ps.03474704.
PMCID: PMC2286754
An efficient system for high-level expression and easy purification of authentic recombinant proteins
Ann-Maree Catanzariti, Tatiana A. Soboleva, David A. Jans, Philip G. Board, and Rohan T. Baker
Protein Sci. 2004 May; 13(5): 1331–1339. doi: 10.1110/ps.04618904.
PMCID: PMC2286746
Spectroscopic characterization of heat-induced nonnative β-lactoglobulin monomers
Thomas Croguennec, Daniel Mollé, Raj Mehra, and Saïd Bouhallab
Protein Sci. 2004 May; 13(5): 1340–1346. doi: 10.1110/ps.03513204.
PMCID: PMC2286769
Modification of cysteine 111 in Cu/Zn superoxide dismutase results in altered spectroscopic and biophysical properties
Mitchel D. de Beus, Jinhyuk Chung, and Wilfredo Colón
Protein Sci. 2004 May; 13(5): 1347–1355. doi: 10.1110/ps.03576904.
PMCID: PMC2286766
Structural stability and heat-induced conformational change of two complement inhibitors: C4b-binding protein and factor H
Lena Kask, Bruno O. Villoutreix, Mårten Steen, Bala Ramesh, Björn Dahlbäck, and Anna M. Blom
Protein Sci. 2004 May; 13(5): 1356–1364. doi: 10.1110/ps.03516504.
PMCID: PMC2286748
Denaturation of replication protein A reveals an alternative conformation with intact domain structure and oligonucleotide binding activity
Jonathan E. Nuss and Gerald M. Alter
Protein Sci. 2004 May; 13(5): 1365–1378. doi: 10.1110/ps.04616304.
PMCID: PMC2286763
Direct measurement of protein osmotic second virial cross coefficients by cross-interaction chromatography
Peter M. Tessier, Stanley I. Sandler, and Abraham M. Lenhoff
Protein Sci. 2004 May; 13(5): 1379–1390. doi: 10.1110/ps.03419204.
PMCID: PMC2286759
Distinct conformational stability and functional activity of four highly homologous endonuclease colicins
Ewald T.J. van den Bremer, Anthony H. Keeble, Wim Jiskoot, Robin E.J. Spelbrink, Claudia S. Maier, Arie Van Hoek, Antonie J.W.G. Visser, Richard James, Geoffrey R. Moore, Colin Kleanthous, and Albert J.R. Heck
Protein Sci. 2004 May; 13(5): 1391–1401. doi: 10.1110/ps.03508204.
PMCID: PMC2286750
Predicting subcellular localization of proteins for Gram-negative bacteria by support vector machines based on n-peptide compositions
Chin-Sheng Yu, Chih-Jen Lin, and Jenn-Kang Hwang
Protein Sci. 2004 May; 13(5): 1402–1406. doi: 10.1110/ps.03479604.
PMCID: PMC2286765
Protein Structure Report
The NMR solution structure of the 30S ribosomal protein S27e encoded in gene RS27_ARCFU of Archaeoglobus fulgidis reveals a novel protein fold
Catherine Herve du Penhoat, Hanudatta S. Atreya, Yang Shen, Gaohua Liu, Thomas B. Acton, Rong Xiao, Zhaohui Li, Diana Murray, Gaetano T. Montelione, and Thomas Szyperski
Protein Sci. 2004 May; 13(5): 1407–1416. doi: 10.1110/ps.03589204.
PMCID: PMC2286747
For the Record
Transient formation of nano-crystalline structures during fibrillation of an Aβ-like peptide
Daniel E. Otzen and Mikael Oliveberg
Protein Sci. 2004 May; 13(5): 1417–1421. doi: 10.1110/ps.03538904.
PMCID: PMC2286749
Identification and analysis of polyserine linker domains in prokaryotic proteins with emphasis on the marine bacterium Microbulbifer degradans
Michael B. Howard, Nathan A. Ekborg, Larry E. Taylor, Steven W. Hutcheson, and Ronald M. Weiner
Protein Sci. 2004 May; 13(5): 1422–1425. doi: 10.1110/ps.03511604.
PMCID: PMC2286767
Shorter side chains optimize helix–helix packing
Sulin Jiang and Ilya A. Vakser
Protein Sci. 2004 May; 13(5): 1426–1429. doi: 10.1110/ps.03505804.
PMCID: PMC2286764
Correction
CORRECTION
Protein Sci. 2004 May; 13(5): 1434.
PMCID: PMC2286758
Corrects: Alexander L. Perryman, et al. HIV-1 protease molecular dynamics of a wild-type and of the V82F/I84V mutant: Possible contributions to drug resistance and a potential new target site for drugs. Protein Sci. 2004 April; 13(4): 1108–1123.
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