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National Shellfish Sanitation Program
Guide for the Control of Molluscan Shellfish
2007

Section IV. Guidance Documents
Chapter II. Growing Areas

Guide Contents

.10 Approved National Shellfish Sanitation Program Laboratory Tests: Microbiological and Biotoxin Analytical Methods


1. Microbiological Methods

Application Sample
Type
Total Coliform1 Fecal Coliform2 Standard
Plate Count3
A-1M APHA ETCP
APHA

Decimal Dilution

MPN
12 tube single dilution

MPN
Other Decimal dilution

MPN
12 tube single dilution

MPN
Decimal dilution

MPN
12 tube single dilution

MPN
mTEC
Growing Area
Survey & Classification
Seawater X X   X4 X4 X X X    
Controlled Relaying Seawater X X   X4 X4 X X X    
Shellfish           X        
Wet Storage Seawater     X         X    
Shellfish           X        
Controlled Purification UV Effluent     X         X    
Shellfish           X X   X  
Market Shellfish Shellstock           X       X
Shucked           X       X
PHP Shucked                    
In Shell                    

References

  1. Total Coliform Methods
    1. American Public Health Association. 1970. Recommended Procedures for the Examination of Sea Water and Shellfish, 4th Edition, APHA, New York, N. Y. [Decimal Dilution MPN test]
    2. American Public Health Association, American Water Works Association, and Water Environmental Federation. 1992. Section 9221. Examination of a 100 ml aliquot by the Multiple Tube Fermentation Method (MTF). Standards Methods for the Examination of Water and Wastewater, 18th Edition, APHA/AWWA/WEF. Washington, D.C. [Decimal Dilution MPN test]
    3. Redman, J. H. 1974. A simpler multiple fermentation tube test for monitoring the bacteriological quality of shellfish harvest waters; the examination of twelve 1.0 ml sample portions, p.123-124. In Wilt, D. S. (ed.), Proceedings 8th National Shellfish Sanitation Workshop,. U.S. Food and Drug Administration, Washington, D.C. [12-tube, Single Dilution MPN test]
    4. Springer, J. A. 1974. Statistical considerations in using the twelve-tube MPN test for routine monitoring of shellfish waters, p.125-126. In Wilt, D. S. (ed.), Proceedings 8th National Shellfish Sanitation Workshop. U.S. Food and Drug Administration, Washington, D.C. [12-tube, Single Dilution MPN test]
  2. Fecal Coliform Methods
    • 40 CFR 136.3 Table I-A. List of Approved Microbiological Methods
    • A-1M, 1990 AOAC International - Official Methods of Analysis, 15th Edition. Association of Official Analytical Chemists. Washington, D.C. [A-1 Modified MPN test]
    • APHA. 1998. Standard Methods for the Examination of Water and Wastewater APHA, 20th Edition, APHA, Washington, DC
    • American Public Health Association. 1970. Recommended Procedures for the Examination of Sea Water and Shellfish, 4th Edition, APHA, New York, N.Y.
    • Rippy, Scott, et. al, Enumeration of Fecal Coliforms and E. coli in marine and estuarine waters: an alternative to the APHA-MPN approach. Journal Water Pollution Control Federation. August 1987, pg. 795-798.
    • U.S. Food and Drug Administration. 2001. (Revised 12-8-02). NSSP Interpretation, 03-III-@.02-100, Options for the use of the 12-tube, single dilution MPN test. [12-tube, Single Dilution MPN test for seawater]
    • U.S. Food and Drug Administration. 2001 (Revised 12-8-02). NSSP Interpretation 03-XV-.03-100, Method for determining fecal coliform levels in end product depurated shellfish. [12-tube, single dilution MPN test for the controlled purification of shellfish]
    • Cabelli, V. J. and W. P. Heffernan. 1970. Accumulation of Escherichia coli by the northern quahog. Appl. Microbiol. 19:239-244. [ETCP for the controlled purification of hard- and soft-shelled clams]
  3. Standard Plate Count Method
    1. American Public Health Association. 1970. Recommended Procedures for the Examination of Sea Water and Shellfish, 4th Edition, APHA, New York, N. Y.

Footnote:

4 The use of A-1 Medium Minus Salicin is optional with the following condition. Any State that eliminates Salicin must show equivalency with a minimum of 30 samples seasonally (4 sets of 30 samples). The samples must generate results and the results must not be significantly different as shown by using a T test. The data generated to support the elimination of Salicin must be submitted to FDA for review and concurrence prior to State action to eliminate the use of Salicin.

2. Marine Biotoxin Method

Application Sample Type Paralytic Shellfish Poison (PSP) Neurotoxic Shellfish Poison (NSP)
Growing Area Survey & Classification Shellfish X X
Controlled Relaying Shellfish X X

References:

  1. Paralytic Shellfish Poison (PSP) and Neurotoxic Shellfish Poison (NSP) Methods
    American Public Health Association. 1970. Recommended Procedures for the Examination of Sea Water and Shellfish, 4th Edition, APHA, New York, N.Y.

3. Type III and Type IV Microbiological Test Methods

Application Sample Type Total Coliform Fecal Coliform Other
Growing Area Survey & Classification Seawater      
Controlled Relaying Seawater      
Shellfish      
Wet Storage Seawater      
Shellfish      
Controlled Purification UV Effluent Type III1    
Shellfish      
Market Shellfish Shellstock      
Shucked      

Footnotes:

  1. 1. Single step direct mEndo-LES Membrane Filter Technique used in the Newburyport Depuration Plant, Massachusetts.

4. Type III and Type IV Marine Biotoxin Test Method

ApplicationSample Type NSP PSP DSP AS Other
Growing Area Survey & Classification Shellfish   Type III2   Type III1  
Controlled Relaying Shellfish       Type III1  

Footnotes:

  1. Peer recognized HPLC Methods with or without clean up.
  2. Jellett Rapid Test for PSP
    1. Method can be used to determine when to perform a mouse bioassay in a previously closed area.
    2. A negative result can be substituted for a mouse bioassay to maintain an area in the open status.
    3. A positive result shall be used for a precautionary closure.

5.  Interim Approval by ISSC Executive Board August 2007

Application Sample Type Vv Vv Vp Vp
PHP Shucked EIA1 MPN2 MPN3 PCR4
In-Shell EIA1 MPN2 MPN3 PCR4

Footnotes:

1 EIA procedure of Tamplin, et al, as described in Chapter 9 of the FDA Bacteriological Analytical Manual, 7th Edition, 1992,

2 MPN method in Chapter 9 of the  FDA Bacteriological Analytical Manual, 7th Edition, May 2004 revision, followed by confirmation using biochemical analyses or by the DNA -alkaline phosphatase labeled gene probe (vvhA).

3 MPN format with confirmation by biochemical analysis, gene probe methodology.

4 PCR methods as they are listed in Chapter 9 of the FDA Bacteriological Analytical Manual, 7th Edition, May 2004 revision, or a method that a State can demonstrate is equivalent.

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