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CCAP BAC Clones
Chromosome 1
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Map Coordinate
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BAC id
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Placement on genome1
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Placement summary3
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BAC End2
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Insert Sequence2
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STS id2
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1p36.33 |
RP11-82D16 |
chr1 2Mb | |
BZ749186 SP6,
CG734216 T7,
CG734215 SP6 | |
AFM214YG7+, AFM214YG7 |
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1p36.32~36.33 |
RP11-62M23 |
chr1 3Mb | |
CG734217 SP6,
BZ749174 SP6,
CG734218 T7,
AQ199787 | |
AFM280WE5+, AFM280WE5 |
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1p36.32b |
RP11-111O5 |
chr1 4Mb | |
CG734220 T7,
CG734219 SP6,
BZ749028 SP6,
AQ322039 SP6 | | AFM123XC3 |
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1p36.23~36.31 |
RP11-60J11 |
chr1 7Mb | |
AQ202255,
BZ749168 SP6,
BZ749169 T7,
AQ202259 | | AFMA210XG9 |
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1p36.22c~36.22d |
RP11-199O1 |
chr1 10Mb | |
BZ749077 T7,
BZ749076 SP6 | |
AFM220YF4+, AFM220YF4 |
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1p36.22a |
RP11-188F7 |
chr1 12Mb | |
BZ749064 T7,
BZ749063 SP6 | |
AFM217YH8+, AFM217YH8 |
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1p36.21c |
RP11-178M15 |
chr1 13Mb | |
BZ749060 SP6,
CG734222 T7,
CG734221 SP6 | |
AFM196XB4+, AFM196XB4 |
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1p36.21b |
RP11-219F4 |
chr1 14Mb | |
BZ749097 T7+,
BZ749096 SP6 | |
AFMA127ZC9+, AFMA127ZC9 |
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1p36.21a~36.21b |
RP11-265F14 |
chr1 15Mb | |
AQ487085 T7+,
AQ487082 SP6 |
AL512883 | D1S436 |
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1p36.13c~36.13d |
RP11-145C4 |
chr1 18Mb | |
CG734224 T7,
BZ749041 SP6,
CG734223 SP6,
AQ372992 SP6 | | AFMA153XE9 |
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1p36.13a |
RP11-251K5 |
chr1 19Mb | |
CG734226 T7,
BZ749106 SP6,
CG734225 SP6 | | AFMA162ZC9 |
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1p36.12b |
RP11-224F8 |
chr1 20Mb | |
CG734228 T7,
BZ749273 SP6,
CG734227 SP6 | | AFM343ZA9 |
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1p36.12a |
RP11-139H5 |
chr1 22Mb | |
AQ383565 SP6,
AQ349268 T7 | | AFM193XB12 |
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1p36.11a~36.11b |
RP11-285H13 |
chr1 27Mb | |
CG734230 T7,
CG734229 SP6,
BZ749119 SP6 | | AFMB291WB5 |
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1p35.3b |
RP11-4O6 |
chr1 27Mb | |
CG734231 SP6,
BZ749147 SP6,
CG734232 T7,
B48097 T7 | | AFMA141ZB1 |
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1p35.2 |
RP11-104J13 |
chr1 31Mb | |
CG734234 T7,
BZ749024 SP6,
CG734233 SP6 | | AFMA134XF9 |
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1p35.1 |
RP11-161A11 |
chr1 34Mb | |
AQ377787 SP6,
AQ377789 T7 | | AFMA107WF9 |
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1p34.3c |
RP11-219O7 |
chr1 36Mb | |
CG734236 T7,
CG734235 SP6,
BZ749098 SP6 | | AFMB037XF1 |
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1p34.3a~34.3b |
RP11-192A12 |
chr1 39Mb | |
BZ749067 T7,
AQ416227 SP6 | |
AFM214YC7+, AFM214YC7 |
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1p34.2b |
RP11-88O2 |
chr1 42Mb | |
CG734238 T7,
CG734237 SP6,
AQ285954 SP6 | | AFM154XG11 |
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1p34.1c |
RP11-291L19 |
chr1 45Mb | | |
AL451136 | |
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1p33c~33d |
RP11-52I2 |
chr1 47Mb | |
BZ749151 T7,
BZ749150 SP6 | | AFMA055XE5 |
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1p32.3 |
RP11-109I2 |
chr1 55Mb | |
AQ321293 T7 |
AC091609 | AA703115 |
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1p32.3 |
RP11-195G13 |
chr1 54Mb | |
AQ422798 T7,
AQ422797 SP6 | | AFMA203YE9 |
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1p32.2b |
RP11-179F24 |
chr1 56Mb | |
AQ419845 SP6,
AQ419846 T7 | | D1S2742 |
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1p32.2a~32.2b |
RP11-12L18 |
chr1 58Mb | |
B75890 SP6,
B75891 T7 |
AC016419+ | AFMA183ZD9 |
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1p31.3d |
RP11-8F24 |
chr1 60Mb | |
BZ749200 SP6,
BZ749201 T7 | |
AFM095WC9+, AFM095WC9 |
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1p31.3c |
RP11-110A23 |
chr1 61Mb | |
AQ324089 T7,
AQ353874 SP6 | | AFM288ZG1 |
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1p31.3b |
RP11-69G14 |
chr1 62Mb | |
AQ237288 T7,
AQ237285 SP6 |
AC093148+ |
AFM197XB6+ |
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1p31.3a~31.3b |
RP11-30A5 |
chr1 63Mb | |
BZ749125 T7,
B85086 SP6,
BZ749124 SP6 | | AFM220YC7 |
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1p31.2d~31.3a |
RP11-265C4 |
chr1 64Mb | |
AQ490158 T7,
AQ490157 SP6 | |
AFMA152YG9+, AFMA152YG9, D1S2617 |
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1p31.2c |
RP11-86K19 |
chr1 65Mb | |
CG734240 T7,
CG734239 SP6,
BZ749193 SP6 | | AFMa050td5 |
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1p31.1j~31.1k |
RP11-111N18 |
chr1 69Mb | |
AQ342569 T7,
AQ320006 SP6 | |
AFM161XB2+, AFM161XB2 |
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1p31.1g~31.1h |
RP11-114K16 |
chr1 75Mb | |
AQ346508 SP6,
AQ346510 T7 | |
AFM294WG1+, AFM294WG1 |
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1p31.1c~31.1d |
RP11-267M21 |
chr1 79Mb | |
BZ749113 SP6,
BZ749114 T7 | |
AFM343VF9+, AFM343VF9 |
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1p31.1b |
RP11-6B16 |
chr1 82Mb | |
BZ749178 SP6,
BZ749179 T7 | |
AFM116XB2+, AFM116XB2 |
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1p31.1a |
RP11-254E16 |
chr1 84Mb | |
CL423100 T7,
CL423099 SP6,
BZ749110 SP6 | | AFMA081XE9 |
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1p22.2b~22.2c |
RP11-125P20 |
chr1 88Mb | |
AQ345064 SP6,
AQ345067 T7 | | AFMA050TA5 |
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1p21.3d~22.1a |
RP11-48A6 |
chr1 95Mb | |
AQ201939,
AQ201937 |
AL356479 | |
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1p21.1~21.2 |
RP11-178M11 |
chr1 101Mb | |
BZ749058 SP6,
BZ749059 T7 | | AFMA102WD9 |
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1p21.1b~21.1c |
RP11-162H15 |
chr1 106Mb | |
AQ375971 SP6,
AQ375973 T7 | |
AFM205YG3+, AFM205YG3 |
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1p21.1b |
RP11-91A21 |
chr1 106Mb | |
AQ286331 T7,
AQ286328 SP6 | |
AFM234VB4+, AFM234VB4 |
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1p13.3d |
RP11-96F24 |
chr1 110Mb | |
AQ314961 SP6,
AQ314963 T7 | |
AFM164XE1+, AFM164XE1 |
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1p13.3c~13.3d |
RP11-260A24 |
chr1 110Mb | |
AQ486340 SP6,
AQ486343 T7 |
AC025987 | AFM084XB3 |
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1p13.3c |
RP11-150K20 |
chr1 111Mb | |
AQ378201 SP6,
AQ378202 T7 | | AFM277VH9 |
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1p13.3b~13.3c |
RP11-284N8 |
chr1 110Mb | |
CG734241 SP6,
CG734242 T7 |
AL365361 | D1S2726 |
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1p13.2 |
RP11-254K1 |
chr1 114Mb | |
AQ478938 SP6,
AQ478940 T7 | |
AFM240YG1+, AFM240YG1 |
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1p13.2a |
RP11-130B18 |
chr1 115Mb | |
BZ749034 SP6,
BZ749035 T7 | |
AFM277YF9+, D1S467 |
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1p12 |
RP11-192J8 |
chr1 118Mb | |
BZ749068 SP6,
BZ749069 T7 | | AFMA226WA9 |
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1p11.2~12 |
RP11-29M22 |
chr1 119Mb | |
BZ749120 SP6,
B87623 T7,
BZ749121 T7 | |
AFMA151ZA5+, AFMA151ZA5 |
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1q21.1 |
RP11-30I17 |
chr1 144Mb | |
B87818 T7,
B87817 SP6 | |
AFM234ZD12+, AFM234ZD12 |
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1q22b |
RP11-71L20 |
chr1 149Mb | |
AQ266265 SP6,
AQ266266 T7 | | AFM336XB1 |
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1q23.1 |
RP11-214H6 |
chr1 154Mb | |
CG734259 SP6,
CG734260 T7,
BZ749093 T7 | | AFMA123WG5 |
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1q23.2~23.3 |
RP11-137M19 |
chr1 157Mb | |
AQ380715 SP6,
AQ347793 T7 | | AFMA133YE5 |
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1q23.3a |
RP11-97G24 |
chr1 158Mb | |
AQ321662 SP6,
AQ321664 T7 | | AFMB334XB1,
SHGC-2910+ |
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1q23.3a~23.3b |
RP11-8D14 |
chr1 158Mb | |
CG734244 T7,
CG734243 SP6 |
AC068728 |
AFM297WB9+, AFM297WB9 |
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1q23.3c~23.3d |
RP11-260G23 |
chr1 160Mb | |
AZ520076 T7,
AQ484719 SP6 | | AFMB324ZD5 |
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1q24.1c |
RP11-193J5 |
chr1 164Mb | |
CG734246 T7,
CG734245 SP6,
BZ749072 SP6 | | AFMA247XD1 |
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1q24.2a |
RP11-234M3 |
chr1 165Mb | |
CG734261 SP6,
CG734262 T7,
BZ749102 T7 | | AFMA129ZF5 |
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1q24.2b |
RP11-249C5 |
chr1 166Mb | |
CG734247 SP6,
BZ749105 T7,
CG734248 T7 | | AFMB359XF5 |
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1q24.2c |
RP11-165A8 |
chr1 169Mb | |
AQ381291 SP6,
AQ381295 T7 | |
AFM122XA3+, AFM122XA3 |
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1q25.1a |
RP11-125J13 |
chr1 171Mb | |
AZ520444 SP6,
AQ348977 T7 | | AFMB352XE9 |
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1q25.1b |
RP11-177M16 |
chr1 172Mb | |
AQ417112 SP6,
AQ418187 T7 | |
AFM212XB10+, AFM212XB10 |
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1q25.2b~25.2c |
RP11-4J2 |
chr1 175Mb | |
BZ749146 T7,
BZ749145 SP6 | | AFMB350XA5 |
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1q25.3d |
RP11-196B7 |
chr1 180Mb | |
CG734263 SP6,
CG734264 T7,
BZ749075 T7 | |
AFM275XE1+, AFM275XE1 |
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1q25.3f~25.3g |
RP11-212K9 |
chr1 181Mb | |
CG734249 T7 | | AFMA116YC5 |
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1q25.3g~31.1a |
RP11-118P13 |
chr1 183Mb | |
AQ349154 T7,
AQ349152 SP6 | |
AFM207VH8+, AFM207VH8 |
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1q31.1a |
RP11-162L13 |
chr1 183Mb | |
AQ376081 SP6,
AQ376084 T7 | | AFM260XF1 |
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1q31.1b |
RP11-134C1 |
chr1 186Mb | |
AQ386079 T7,
AQ386078 SP6 |
AL136372 | D1S238 |
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1q31.1c |
RP11-271G3 |
chr1 187Mb | |
BZ749117 T7,
CG734266 T7,
CG734265 SP6 | |
AFM123YC7+, AFM123YC7 |
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1q31.3b~31.3c |
RP11-173E24 |
chr1 193Mb | |
BZ749054 SP6,
BZ749055 T7 |
AL138926 | AFMB354ZE1 |
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1q31.3d~32.1a |
RP11-249C10 |
chr1 198Mb | |
BZ749103 SP6,
BZ749104 T7 | | AFMa116wg1 |
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1q32.1b~32.1c |
RP11-150L7 |
chr1 199Mb | |
AQ374739 SP6,
AQ374740 T7 | | AFM289YE9 |
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1q32.1c~32.1d |
RP11-65I22 |
chr1 200Mb | |
AQ241124 SP6,
BZ749176 T7,
BZ749175 SP6,
AQ200839 | | AFMA275ZC5 |
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1q32.1e~32.1f |
RP11-148K15 |
chr1 202Mb | |
AQ374944 SP6,
AQ374947 T7 | | AFMA123YF1 |
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1q32.1f |
RP11-155F3 |
chr1 202Mb | |
AQ371496 T7,
AQ371494 SP6 | | AFMA052ZD5 |
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1q32.1h |
RP11-219P13 |
chr1 203Mb | |
CG734251 T7,
CG734250 SP6 | | D1S249 |
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1q32.2a~32.2b |
RP11-57I17 |
chr1 205Mb | |
AQ115505,
CG734253 T7,
CG734252 SP6,
AQ082639,
BZ749160 SP6 |
AL137789 | AFMB347YA5 |
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1q32.2b |
RP11-145I13 |
chr1 205Mb | |
BZ749043 T7,
AQ372306 SP6,
BZ749042 SP6 | | AFMB032YF1 |
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1q32.2b~32.2c |
RP11-167J2 |
chr1 207Mb | |
AQ421322 SP6,
BZ749049 SP6,
BZ749050 T7 | |
AFM281YG1+, AFM281YG1,
AFM310VB1+, AFM310VB1 |
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1q32.2c |
RP11-123O6 |
chr1 209Mb | |
BZ749029 SP6,
BZ749030 T7 | | AFMC011YD5 |
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1q32.3a |
RP11-216F1 |
chr1 209Mb | |
BZ749095 T7,
BZ749094 SP6 | | AFM203ZB6, D1S425 |
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1q32.3c |
RP11-193P21 |
chr1 210Mb | |
BZ749074 T7,
BZ749073 SP6 | |
AFM156XG7+,
AFM156xg7+, AFM156xg7 |
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1q41a |
RP11-74E6 |
chr1 212Mb | |
BZ749182 SP6,
BZ749183 T7,
AQ269156 SP6 | | AFM199WH2 |
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1q41a~41b |
RP11-124A11 |
chr1 213Mb | |
AQ346111 SP6,
AQ346113 T7 | |
AFM286YC1+, AFM286YC1 |
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1q41b |
RP11-131M16 |
chr1 214Mb | |
BZ749040 SP6,
CL423166 SP6,
CL423168 T7 | | AFM297XC1 |
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1q41b~41c |
RP11-260A10 |
chr1 215Mb | |
AQ486304 T7,
AQ486301 SP6 | | AFM309YD1, D1S490 |
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1q41e |
RP11-149C8 |
chr1 220Mb | |
CG734267 SP6,
BZ749044 SP6,
CG734268 T7 | | AFMA052ZD1 |
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1q42.12 |
RP11-192M1 |
chr1 224Mb | |
BZ749071 T7,
BZ749070 SP6 | |
AFM290WD1+, AFM290WD1 |
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1q42.13b |
RP11-275O4 |
chr1 225Mb | | |
AL451054 | stSG32674FS |
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1q42.13e~42.13f |
RP11-3K22 |
chr1 227Mb | |
B48831 T7,
AQ316743 SP6 |
AL359874 | |
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1q42.2b |
RP11-210E16 |
chr1 230Mb | |
CG734269 SP6,
BZ749091 SP6,
CG734270 T7 | |
AFM119YH10+, AFM119YH10 |
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1q42.2c |
RP11-155C15 |
chr1 232Mb | |
AQ387843 SP6+,
AZ516132 T7 | |
AFM238YA7+, AFM238YA7 |
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1q43c |
RP11-130I13 |
chr1 237Mb | |
BZ749036 SP6,
BZ749037 T7 | |
AFMA230WH1+ |
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1q43d~43e |
RP11-194F13 |
chr1 239Mb | |
AQ412861 SP6,
AQ629756 T7 | |
AFM218ZB6+, AFM218ZB6 |
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1q43e~43f |
RP11-212E22 |
chr1 240Mb | |
CG734272 T7,
CG734271 SP6,
BZ749092 SP6 | | AFM337ZF5 |
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1q44a |
RP11-156E8 |
chr1 243Mb | |
AQ388406 SP6+ |
AL356512 | |
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1q44e |
RP11-634B7 |
chr1 245Mb | | |
AC118470 | |
1 FISH-mapped clone was placed on the sequenced
genome based on BAC-ends, insert sequences and STSs.
2 Sequences that are associated with the clone
and used for clone placement.  
* indicates
sequences that disagree with data in 'Placement on genome' column.  
+ indicates sequences that didn't align to the
genome or were not used for annotation.
3 Placement summary indicates sequences
used for clone placement. BAC-end sequence aligned in the plus orientation BAC-end sequence aligned in the minus orientation insert sequence STS aligned insert sequence has clone end information.
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