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CCAP BAC Clones

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Chromosome 22


Map Coordinate BAC id Placement on genome1 Placement summary3 BAC End2 Insert Sequence2 STS id2
22q11.1d CTA-115F6 chr22 16Mb B18171 T7,
B18170 SP6
  D22S137
22q11.21 RP11-91O6 chr22 16Mb AQ282783 T7,
AQ282780 SP6
  
22q11.22a CTA-526G4 chr22 20Mb BZ749020 SP6,
BZ749021 T7
  WI-13513+,
WI-362,
stD22S112
22q11.23a CTA-322B1 chr22 22Mb B13824 SP6,
B13825 T7
Z84718 WI-7416,
stbK322B1T7
22q11.23c CTA-221G9 chr22 23Mb BZ749006 T7,
BZ749005 SP6,
B18023 SP6
Z99916 stbK76C9T7
22q12.1b CTA-992D9 chr22 25Mb B14155 T7,
B14154 SP6
AL008638 stWI-13238+
22q12.1c CTA-57G9 chr22 27Mb B13991 T7,
B18131 T7
Z95116 stD22S991E.1
22q12.2b CTA-99F11   B14164 SP6+   
22q12.3 CTA-221H1 chr22 32Mb BZ749008 T7,
B18024 T7,
BZ749007 SP6
AL008717 stW1-355
22q12.3 CTA-415G2 chr22 31Mb BZ749016 SP6,
BZ749017 T7
Z83846 stD22S411E
22q12.3d~13.1d CTA-212A2 chr22 34Mb BZ749004 T7,
BZ749003 SP6
Z95114 WI-16714,
WI-2,
WI-379,
stcN27A12T3
22q13.1c CTA-390B3 chr22 36Mb B13894 SP6,
B13895 T7
Z93096 stbK390B3.TP+
22q13.1d CTA-150C2 chr22 37Mb B18203 SP6,
B18204 T7
AL022318 stbK236E8TP
22q13.2b CTA-229A8 chr22 39Mb BZ749010 T7,
BZ749009 SP6
Z86090 D22S279,
stbK229A8.SP6
22q13.2b~13.2c CTA-250D10 chr22 40Mb BZ749011 T7,
B14274 SP6
Z99716 D22S307,
D22S410E,
SGC30242,
WI-12706,
WI-6209,
WI-7665,
stCYP2DP1
22q13.31c~13.31d CTA-397C4 chr22 43Mb B13909 T7,
B13908 SP6
Z81308 stD22S40+
22q13.31d~13.31e CTA-268H5 chr22 43Mb B18070 SP6,
BZ749013 T7,
BZ749012 SP6
AL008718 AFMA151XE9
22q13.31f CTB-109B5 chr22 46Mb BZ748969 SP6,
BZ748970 T7
AL021306 stcN75H12B
22q13.32b CTA-299D3 chr22 47Mb B18085 SP6,
BZ749015 T7,
BZ749014 SP6
Z84468 stbK299D3A
22q13.33a CTA-722E9 chr22 48Mb B14046 T7,
B14045 SP6
AL008636 stbK148G1TV
22q13.33b CTA-799F10 chr22 49Mb BZ749023 T7,
BZ749022 SP6
Z82245 WI-8917+,
stD22S163b

1 FISH-mapped clone was placed on the sequenced genome based on BAC-ends, insert sequences and STSs.

2 Sequences that are associated with the clone and used for clone placement.
   * indicates sequences that disagree with data in 'Placement on genome' column.
   + indicates sequences that didn't align to the genome or were not used for annotation.

3 Placement summary indicates sequences used for clone placement.
   BAC-end sequence aligned in the plus orientation
   BAC-end sequence aligned in the minus orientation
   insert sequence
   STS aligned
   insert sequence has clone end information.


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