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CCAP BAC Clones

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Chromosome 15


Map Coordinate BAC id Placement on genome1 Placement summary3 BAC End2 Insert Sequence2 STS id2
15q11.2e RP11-373J1 chr15 21Mb AZ301786 SP6,
AZ301785 T7
  RH54328
15q12a RP11-307C10 chr15 20Mb AZ301243 T7,
AZ301244 SP6
  RH10708
15q12c~13.1a RP11-339C21 chr15 23Mb AZ301283 T7,
AZ301284 SP6
  RH39531
15q13.1c~13.2a RP11-414N15 chr15 29Mb AZ301255 T7,
AZ301256 SP6
AC130691+ RH77828
15q13.2a~13.2b RP11-438M3 chr15 28Mb AZ301257 T7,
AZ301258 SP6
  RH64897
15q13.3a~13.3b RP11-303I17 chr15 28Mb AZ301278 SP6,
AZ301277 T7
  RH54447
15q13.3b~13.3c RP11-420B6 chr15 30Mb AZ301297 T7,
AZ301298 SP6
  RH74897
15q13.3d RP11-462A2 chr15 33Mb AZ301299 T7,
AZ303309 SP6
  RH65444
15q14a RP11-347I18 chr15 32Mb AQ528837 SP6,
AZ301288 SP6,
AQ528838 T7,
AZ301287 T7
  RH54191
15q14c~14d RP11-477P17 chr15 36Mb AQ636714 T7+,
AZ301269 T7,
AQ636712 SP6,
AZ301270 SP6
  RH54151
15q14d~15.1a RP11-415B4 chr15 37Mb AQ547989 SP6+,
AZ301295 T7,
AZ301296 SP6
  RH77893
15q15.1b RP11-555K11 chr15 38Mb AZ301303 T7,
AZ301304 SP6
  RH25637
15q15.1b~15.1c RP11-526N6 chr15 39Mb AZ301273 T7,
AZ301274 SP6
  RH71140
15q15.1c~15.1d RP11-463B11 chr15 39Mb AQ634911 T7+,
AZ301266 SP6,
AZ301265 T7
  RH54251,
RH71140
15q15.2a~15.2b RP11-402F9 chr15 41Mb AZ301789 T7,
AZ301790 SP6
AC009852,
AC087829
RH74787
15q15.3b RP11-315A19 chr15 41Mb AZ301311 T7,
AQ538490 SP6,
AZ301312 SP6
AC011330,
AC099821
RH39570
15q21.1a~21.1b RP11-552E10 chr15 45Mb AZ301329 T7,
AZ301330 SP6
AC012050,
AC090546
RH79183
15q21.1c RP11-558D7 chr15 46Mb AZ301332 SP6,
AZ301331 T7
  RH75088
15q21.2a RP11-294O11 chr15 48Mb AZ301781 T7,
AZ301782 SP6
AC009851,
AC087584
RH54318
15q21.2b~21.2c RP11-305H12 chr15 49Mb AZ301242 SP6,
AZ301241 T7
  RH54161
15q21.3a~21.3b RP11-315E19 chr15 52Mb AZ301247 T7,
AQ538790 SP6,
AZ301248 SP6
  RH54225
15q21.3b~21.3c RP11-460A24 chr15 53Mb AZ301264 SP6,
AZ301263 T7
AC016527 RH65629
15q21.3d RP11-323F24 chr15 54Mb AQ544228 SP6,
AZ301784 SP6,
AZ301783 T7
AC010999 RH36930
15q22.1a~22.1b RP11-353J8 chr15 55Mb AQ530325 T7+,
AZ301252 SP6,
AZ301251 T7
  RH54291
15q22.2a~22.2b RP11-306H6 chr15 57Mb AZ301280 SP6,
AZ301279 T7
  RH54362+
15q22.31b RP11-448B5 chr15 64Mb AZ301321 T7,
AZ301322 SP6
  RH44449
15q24.1a~24.1b RP11-500O23 chr15 70Mb AZ301222 SP6,
AZ301221 T7
  RH26696,
RH47216
15q24.2a RP11-289H7 chr15 74Mb AZ301213 T7,
AZ301214 SP6
  RH17222
15q24.3a RP11-338C8 chr15 75Mb AZ301215 T7,
AZ301216 SP6
  RH39460+
15q25.1a~25.1b RP11-558F16 chr15 79Mb AZ301230 SP6,
AZ301229 T7
  RH69578
15q25.2a~25.2b RP11-559G12 chr15 80Mb AZ301276 SP6+,
AZ301275 T7
  RH54250
15q25.2b RP11-402J23 chr15 82Mb AZ301219 T7,
AZ301220 SP6
  RH54081
15q25.3a RP11-296P8 chr15 83Mb AZ301212 SP6,
AZ301211 T7
  RH54181
15q26.1a RP11-533L13 chr15 86Mb AZ301223 T7,
AZ301224 SP6
  RH39486,
RH44907
15q26.1a RP11-538D2 chr15 86Mb AZ301225 T7,
AZ301226 SP6
  RH44907
15q26.1b RP11-360F18 chr15 88Mb AZ301289 T7,
AZ301290 SP6,
AZ519600 SP6
  RH54255
15q26.1c RP11-378B5 chr15 89Mb AZ301319 T7,
AQ534334 SP6,
AZ301320 SP6
  RH39554
15q26.1d RP11-304N14 chr15 90Mb AZ301310+,
AZ301309 T7
AC020563,
AC091580
RH47406
15q26.1e RP11-369O17 chr15 91Mb AZ301318 SP6,
AZ301317 T7
  RH26599
15q26.2a~26.2b RP11-337N12 chr15 94Mb AZ301950 SP6,
AZ301949 T7
  RH45711
15q26.2c RP11-308P12 chr15 96Mb AZ301245 T7,
AZ301246 SP6
  RH47884
15q26.3a RP11-397C10 chr15 97Mb AZ301293 T7,
AZ301294 SP6
  RH70207
15q26.3d RP11-530H6 chr15 99Mb AZ301328 SP6,
AZ301327 T7
  RH44112

1 FISH-mapped clone was placed on the sequenced genome based on BAC-ends, insert sequences and STSs.

2 Sequences that are associated with the clone and used for clone placement.
   * indicates sequences that disagree with data in 'Placement on genome' column.
   + indicates sequences that didn't align to the genome or were not used for annotation.

3 Placement summary indicates sequences used for clone placement.
   BAC-end sequence aligned in the plus orientation
   BAC-end sequence aligned in the minus orientation
   insert sequence
   STS aligned
   insert sequence has clone end information.


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