Research Tools Developed by BESD Programs
- Genome
Catalog
The Genome Catalog is a series of interface tools for visualization
and querying the reference human genome and other genomes assembled
and annotated by ORNL and collaborators.
- GrailEXP
GrailEXP is a software package that predicts exons, genes, promoters,
polyas, CpG islands, EST similarities, and repetitive elements
within DNA sequence for the Computational Analysis of DNA Sequence.
- Generation
Generation is a software program that can train itself on microbial
and model organisms and produce a set of data which can be used
by GrailEXP v3.0 to recognize genes in these organisms.
- Mutant
Mouse Database
A large collection of mouse stocks, most of which propagate
mutations induced (over a period of several decades) by radiation
or chemicals in various stages of male or female gametogenesis.
- PROSPECT
PROtein Structure Prediction and Evaluation Computer Toolkit
is a threading-based protein structure prediction system.
- Ecological
Risk Analysis
This site contains information and resources on a variety of
topics related to the growing field of ecological risk analysis.
- Radiation
Risk Analysis
The Center for Biokinetic and Dosimetric Research provides downloadable
models, data files, computer codes, and help files that provide
ready access to data of interest in the radiation protection
of workers and members of the public.
- Risk
Assessment Information System
The RAIS contains Risk Assessment Tools designed for use at
all DOE sites that can be customized for site-specific conditions
as well as information, guidance, and risk results applicable
to the Oak Ridge Reservation.
- Soil
Screening Guidance for Chemicals
The Soil Screening Guidance (SSG) presents a framework for developing
risk-based, soil screening levels (SSLs) for protection of human
health.
- Soil
Screening Guidance for Radionuclices
The U.S. Environmental Protection Agency (EPA) has developed
this Soil Screening Guidance for Radionuclides as a tool for
screening at radioactively contaminated National Priorities
List (NPL) sites.
- PRGs
for Radionuclides
This guidance providea a PRG calculation tool to assist risk
assessors, remedial project managers, and others involved with
risk assessment and decision-making at CERCLA sites in developing
PRGs.
- Radionuclide
ARAR Dose Compliance Concentrations (DCCs)
The purpose of this database is to provide a DCC calculation
tool to assist risk assessors, remedial project managers, and
others involved with risk assessment and decision-making at
CERCLA sites in developing DCCs.
- Genetic
Toxicology Database (GeneTox)
- Environmental
Mutagen Information Center (EMIC)
- Environmental
Teratology Information Center File (ETIC)
- Environmental
Carcinogen Information Center (ECIC) File B
- GeneTox
Carcinogen File (CARC)
- Cell
Transformation Information File