Interactive Tutorial II: Web Tools (http://www.niehs.nih.gov/news/events/pastmtg/2006/snpwork/docs/day2_900am_tutorial2.pdf) (364 KB) (All with Dana Crawford, Ph.D. - Lead)
EGP Tools
Site Selection
Linkage Disequilibrium
Haplotype Analysis
GVS
10:30 - 10:45
Break
10:45 - 12:15
SNP Genotyping (http://www.niehs.nih.gov/news/events/pastmtg/2006/snpwork/docs/day2_1045am_nickerson.pdf) (6.2 MB) (Debbie Nickerson, Ph.D.)
Technology Platforms
Candidate Gene
Whole Genome Data
Quality Control
12:15 - 1:30
Lunch
1:30 - 3:15
Association Analysis (http://www.niehs.nih.gov/news/events/pastmtg/2006/snpwork/docs/day2_130pm_carlson.pdf) (1.7 MB) (Chris Carlson, Ph.D.)
Study Design
Haplotype Analysis vs. SNP Analysis
Analysis Methods
Candidate Gene
Whole Genome
Replication and Function
3:15 - 3:30
Break
3:30 - 4:00
Medical Resequencing (http://www.niehs.nih.gov/news/events/pastmtg/2006/snpwork/docs/day2_330pm_nickerson.pdf) (2.4 MB) (Debbie Nickerson, Ph.D.)