Topic Replies Views Activity
Phylodynamic Analysis | 176 genomes | 6 Mar 2020
nCoV-2019 Genomic Epidemiology

Phylogenetic analysis of nCoV-2019 genomes 6-Mar-2020 Andrew Rambaut, University of Edinburgh, Edinburgh UK a.rambaut@ed.ac.uk This is a brief report outlining a simple phylogenetic analysis of publicly shared genome…

17 94565 April 2, 2020
Tracking SARS-CoV-2 VOC 202012/01 (lineage B.1.1.7) dissemination in Portugal: insights from nationwide RT-PCR Spike gene drop out data
SARS-CoV-2 coronavirus
0 600 January 19, 2021
Phylogenetic evidence that B.1.1.7 has been circulating in the United States since early- to mid-November
nCoV-2019 Genomic Epidemiology
0 3057 January 19, 2021
SARS-CoV-2 reinfection by the new Variant of Concern (VOC) P.1 in Amazonas, Brazil
nCoV-2019 Genomic Epidemiology
3 5022 January 19, 2021
Mutations arising in SARS-CoV-2 spike on sustained human-to-human transmission and human-to-animal passage
SARS-CoV-2 coronavirus
3 20119 January 18, 2021
Exploring the natural origins of SARS-CoV-2
nCoV-2019 Evolutionary History
0 3312 January 16, 2021
Detection of non-B.1.1.7 Spike ∆69/70 sequences (B.1.375) in the United States
nCoV-2019 Genomic Epidemiology
1 2166 January 14, 2021
Tracking the international spread of SARS-CoV-2 lineages B.1.1.7 and B.1.351/501Y-V2
nCoV-2019 Genomic Epidemiology
0 5789 January 13, 2021
Genomic characterisation of an emergent SARS-CoV-2 lineage in Manaus: preliminary findings
nCoV-2019 Genomic Epidemiology
0 35837 January 12, 2021
Multiplexed RT-qPCR to screen for SARS-COV-2 B.1.1.7 variants: Preliminary results
nCoV-2019 Diagnostics and Vaccines
0 1034 January 12, 2021
Phylogenetic relationship of SARS-CoV-2 sequences from Amazonas with emerging Brazilian variants harboring mutations E484K and N501Y in the Spike protein
nCoV-2019 Genomic Epidemiology
0 11143 January 11, 2021
Spike E484K mutation in the first SARS-CoV-2 reinfection case confirmed in Brazil, 2020
nCoV-2019 Genomic Epidemiology
0 19889 January 10, 2021
Spike E484K mutation in the first SARS-CoV-2 reinfection case confirmed in Brazil
nCoV-2019 Genomic Epidemiology
0 502 January 10, 2021
SARS-CoV-2 diversity in Uganda, December, 2020
SARS-CoV-2 coronavirus
2 2764 January 6, 2021
Updated Nextstain SARS-CoV-2 clade naming strategy
nCoV-2019 Genomic Epidemiology
0 2069 January 5, 2021
Emergence of Y453F and Δ69-70HV mutations in a lymphoma patient with long-term COVID-19
nCoV-2019 Genomic Epidemiology
3 11265 January 4, 2021
Identification of a novel SARS-CoV-2 Spike 69-70 deletion lineage circulating in the United States
SARS-CoV-2 Molecular Evolution
1 3356 December 31, 2020
Transmission of SARS-CoV-2 Lineage B.1.1.7 in England: Insights from linking epidemiological and genetic data
nCoV-2019 Genomic Epidemiology
1 6196 December 30, 2020
Lineage-specific growth of SARS-CoV-2 B.1.1.7 during the English national lockdown
nCoV-2019 Genomic Epidemiology
1 15594 December 30, 2020
A preliminary selection analysis of the South African V501.V2 SARS-CoV-2 clade
SARS-CoV-2 Molecular Evolution
0 2739 December 29, 2020
Detection of SARS-CoV-2 P681H Spike Protein Variant in Nigeria
nCoV-2019 Genomic Epidemiology
0 5617 December 23, 2020
Issues with SARS-CoV-2 sequencing data
nCoV-2019 Genomic Epidemiology
12 25112 December 22, 2020
Masking strategies for SARS-CoV-2 alignments
Software and Tools
12 6340 December 22, 2020
Preliminary genomic characterisation of an emergent SARS-CoV-2 lineage in the UK defined by a novel set of spike mutations
nCoV-2019 Genomic Epidemiology
4 220953 December 21, 2020
Postdoc HIV Databases, Los Alamos National Laboratory
Jobs and Opportunities
0 684 December 17, 2020
Genomic epidemiology of the early stages of SARS-CoV-2 outbreak in Russia
nCoV-2019 Genomic Epidemiology
6 3223 December 8, 2020
Naturally occurring indels in multiple coronavirus spikes
SARS-CoV-2 coronavirus
3 5829 November 23, 2020
Microbial Metagenomics Uncovers the First Rabbit Haemorrhagic Disease Virus Case in Sub-Saharan Africa
0 1324 November 21, 2020
Whole-Genome Sequence of the Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) obtained from a South African Coronavirus Disease 2019 (COVID-19) Patient
Genome Reports
0 27940 April 1, 2020
Genomic epidemiology of hCoV-19 in Guangdong Province, China
nCoV-2019 Genomic Epidemiology
0 8701 March 9, 2020