TARGET Data Matrix
Last Updated: August 24, 2020
The Genomic Data Commons (GDC) is currently working on developing their whole genome sequencing (WGS) analysis pipeline. While some TARGET analyzed WGS data is already available via the GDC Data Portal, not all aliquots have completed the analysis phase. The TARGET aliquots that are currently still undergoing WGS analysis at the GDC are listed here: https://ocg.cancer.gov/TARGET-WGS-Aliquots-Undergoing-Analysis-At-GDC.
Disease | Patient Data | Gene Expression | Copy Number | Methylation | miRNA | Sequence | Other | |||||||||
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Acute Lymphoblastic Leukemia (ALL) | ||||||||||||||||
ALL Phase 1 (B-ALL) |
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ALL Phase 2 (B-ALL, T-ALL, Dicentric, Xenograft) |
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ALL Phase 3 (ALAL) |
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Acute Myeloid Leukemia (AML) | ||||||||||||||||
AML |
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Kidney Tumors | ||||||||||||||||
Wilms Tumor (WT) |
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Clear Cell Sarcoma of the Kidney (CCSK) |
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Rhabdoid Tumor (RT) |
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Neuroblastoma (NBL) | ||||||||||||||||
NBL |
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Osteosarcoma (OS) | ||||||||||||||||
OS |
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Pan-cancer Model Systems (MDLS) | ||||||||||||||||
NBL Model Systems |
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Pediatric Preclinical Testing Program (PPTP) |
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Projects and assays with available information or data are hyperlinked
Patient Data:
Gene Expression:
Copy Number:
Methylation:
MiRNA:
Sequence:
Patient Data:
Gene Expression:
Copy Number:
Methylation:
MiRNA:
Sequence:
Other:
Patient Data:
Gene Expression:
Copy Number:
Methylation:
MiRNA:
Sequence:
Other:
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Patient Data:
Gene Expression:
Copy Number:
Methylation:
MiRNA:
Sequence:
Other:
|
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Patient Data:
Gene Expression:
Copy Number:
Methylation:
MiRNA:
Sequence:
Other:
Patient Data:
Gene Expression:
Copy Number:
Methylation:
MiRNA:
Sequence:
Other:
Patient Data:
Gene Expression:
Copy Number:
Methylation:
MiRNA:
Sequence:
|
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Patient Data:
Gene Expression:
Copy Number:
Methylation:
MiRNA:
Sequence:
Other:
|
||||||||
Patient Data:
Gene Expression:
Copy Number:
Methylation:
MiRNA:
Sequence:
Other:
|
||||||||
Patient Data:
Gene Expression:
Copy Number:
Methylation:
MiRNA:
Sequence:
Other:
Patient Data:
Gene Expression:
Copy Number:
Methylation:
MiRNA:
Sequence:
Other:
|
TARGET Data Legend | |
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Blue: Public*
Red: Protected†
Black: Unavailable
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All DCC Controlled† access links require an eRA Commons account via Globus.org |