Bioinformatics Data Publishing and Format Tools

Analytical and Computational Tools

• Format Converter v2.0.3
  This program takes as input a sequence or sequences (e.g., an alignment) in an unspecified format and converts the sequence(s) to a different user-specified format.
• SeqPublish/Sequence Alignment Publishing Tool
  This interface takes a sequence alignment (nucleotides or amino acids) and replaces residues identical to a reference sequence with dashes.

Visualization and Modeling Tools

• Heatmap
  A heatmap is a graphical way of displaying a table of numbers by using colors to represent the numerical values.
• BCCB Mobyle Interface Designer (BMID)
  This is a browser-based application for creating web interfaces for command-line applications.

Contact Information

For more information on Bioinformatics Data Publishing and Format Tools, email
Bioinformatics and Computational Sciences Branch