Nikki Durkan: Parasites Abound, June 29, 2015

NOAA Teacher at Sea
Nikki Durkan
Aboard NOAA Ship Oscar Dyson
June 11 – 30, 2015

Mission: Midwater Assessment Conservation Survey
Geographical area of cruise: Gulf of Alaska
Date: Monday, June 29, 2015

Weather Data from the Bridge:
Wind speed (knots): 8.25
Sea Temp (deg C): 10.59
Air Temp (deg C):  10

Science and Technology Log:

Parasites – some lurk inside our bodies without us knowing and some could even have an influence on our personalities. One of my favorite Radio Lab episodes describes research conducted on this subject. National Geographic Magazine also published a feature article I found quite interesting – Zombie Parasites that Mind Control Their Hosts.  In addition to capturing our interest because of their sci-fi-like existence, parasites may also be utilized to study ecological interactions.  Parasites a fish picks up throughout its life can indicate information about where the fish has traveled – these co-dependent organisms serve as biological tags that scientists can then interpret.

Nematodes on Pollock Liver - most of the Pollock we caught have had these in their guts.

Nematodes on Pollock Liver – most of the Pollock we caught have had these in their guts.

Parasites often require several hosts to complete their lifecycles and one nematode that can infect Pollock (and humans incidentally) is Anisakiasis.  While I love sushi, raw fish can pose serious risk to our health.  “Sushi-grade” labels, similar to the ubiquitous “natural” labels, do not meet any standardized specifications. However, the FDA does set freezing requirements for the sale of raw fish that commonly possess parasites…so enjoy your sushi 🙂

The pathobiologists at the Alaska Fisheries Science Center are currently investigating the impacts certain parasites may have on Pollock. While many species of parasites have been recognized, we still have a lot to learn about their impact on populations and ecosystems. Scientists are attempting to identify those that are likely to influence the booms and busts that can occur within the Pollock populations. More specifically, their current research centers around a microsporidian (pleistophora sp.) that lives within the muscle tissue of Pollock and may impact the fishes ability to swim and breed. (AFSC Pathobiology)

Microsporidian (pleistophora sp.) marked with asterisk Photo Credit: NOAA

These critters are found in most Pollock catches as well - they are sometimes called sea lice.

These critters are found in most Pollock catches as well – they are also called sea lice.

Sometimes ships pick up parasites too! The introduction of invasive species to fragile ecosystems is one of the leading causes of extinction and ballast water is the number one reason for the distribution of aquatic nuisance species. The Great Lakes region serves as a warning about the devastation ballast water can inflict on an ecosystem. Ships can transport ballast water from one region to another and then release the ballast water (along with numerous non-native organisms). No longer encumbered by natural predators or other environmental pressures that help to keep populations in check, the invasive species can flourish, often at the expense of the native species. NOAA has implemented strict guidelines for the release of ballast water to limit the spread of invasive species.  The Oscar Dyson also uses a lot of oil to keep all the working parts of our engine room functioning, but some of this oil drips off and collects in the bilge water. This oily bilge water is then separated and the oil is used in our trash incinerator (all garbage with the exception of food scraps is burned in the incinerator).  Thanks to our Chief Marine Engineer, Alan Bennett, for taking me and Vinny on a tour of the ship.

Thanks, Allan!

Thanks, Allan!

Personal Log:

Fortunately, after three weeks of being splattered with all parts of a Pollock you can think of and eating my fair share of fish, I am currently free of fish parasites…to my knowledge! Our wonderful chefs, Arnold Dones and Adam Staiger, have been cooking healthy, varied meals for 32 people over the course of three weeks – this is no small feat!  The soups are my favorite and have inspired me to make more when I return home. I know from camping experiences with my students and living at a boarding school campus, that food is directly connected to morale.  Last night, the chefs spoiled everyone with steak and crab legs!

Chef Adam Staiger is full of smiles!

Chef Adam Staiger is always full of smiles!

 

Vincent Colombo, What makes the Oscar Dyson tick?, June 29, 2015

NOAA Teacher at Sea
Vincent Colombo
Aboard NOAA Ship Oscar Dyson
June 11 – 30, 2015

Mission: Annual Walleye Pollock Survey
Geographical area of the cruise: The Gulf of Alaska
Date: June 29, 2015

Weather Data from the Bridge:

  • Wind Speed: 10.7 knots
  • Sea Temperature: 9.6 degrees Celsius
  • Air Temperature: 10.5 degrees Celsius
  • Air Pressure: 1008.8 mb
Sunrise in Alaska

Sunrise in Alaska

When the fog lifts, hidden beauties and dangers are revealed

Another picture of Shishaldin Volcano – taken by scientist on board the Oscar Dyson, Robert Levine

A view of the Gulf of Alaska

A view of the Gulf of Alaska

In front of Kuiukta Bay

In front of Kuiukta Bay

Mitrofania Bay

Mitrofania Bay

Sandy Point, Alaska

Sandy Point, Alaska


The NOAA Vessel Oscar Dyson is named after the late Oscar E. Dyson. His placard reads the following:

Oscar Dyson

A Friend of Fisheries

Oscar promoted research and effective management

to sustain Alaska’s fisheries for future generations.

Oscar Dyson Plaque

Oscar Dyson Plaque

The small vessel on the Oscar Dyson is named after his wife

The small vessel on the Oscar Dyson is named after his wife


Science and Technology Log:

If you read the link under my page: http://teacheratsea.noaa.gov/#/2015/Vincent*Colombo/ship , it will tell you all about the ship, Oscar Dyson. This ship is nothing less than a modern marvel of technology. Luckily my fellow teacher at sea, Nikki Durkan and I got to experience the science of this ship first hand. Our Chief engineer, Mr. Alan Bennett took us for a tour of the inner workings of this ship.

Chief Engineer Alan Bennett

Chief Engineer Alan Bennett

Our tour started with a look at the Ship’s control panel. From this set of computers and controls, everything, and I mean everything on the ship can be controlled.

The Control Panel below deck

The Control Panel below deck

"We can control the entire ship from right here."

“We can control the entire ship from right here.”

From there, we went into the main engine room. One may recognize the Rime of the Ancient Mariner by Samuel Taylor Coleridge, which in part of the poem says:

“Water, water, everywhere,

And all the boards did shrink;

Water, water, everywhere,

Nor any drop to drink.”

Not the case on the Oscar Dyson, because the heat from the engines is used to distill up to 1,000 gallons of freshwater each day!

Where the Oscar Dyson makes fresh water

Where the Oscar Dyson makes fresh water

The ship also uses an Ultra Violet filter to kill all the undesirables in the water just in case.

Ultraviolet Filter

Ultraviolet Filter

Warning for the filter

Warning for the filter

From there, we got to travel through water tight doors into the rear of the ship. These doors are intimidating, and as our Chief Engineer said, in case there is a loss of power, the door can be bypassed so no one is trapped under the ship.

Alan in front of the door showing us the manual bypass

Alan in front of the door showing us the manual bypass

Water tight door. You DO NOT want to be in the way when this closes.

Water tight door. You DO NOT want to be in the way when this closes.

Here you can see one of the massive winches used for the trawl net the ship uses to catch fish. One winch is over 6 foot in diameter and has a thousand meters of steel cable. I wonder if it will fit on the front of a Jeep…

Those winches are no joke. The ship also has a bunch of hydraulic pumps ready and able to bring those trawl nets in fast if need be. Each of these hydraulic pumps has 1,000 gallons of fluid ready to retrieve a net in a hurry if the need exists.

The hydraulic pumps

The hydraulic pumps

One really cool thing I learned was that in case the ship had a major issue and could not be steered from the bridge, there is a way to use the ship’s heading underneath for someone to manually operate the rudder.

Yes you can drive the ship blind

Yes you can drive the ship blind

The manual rudder control

The manual rudder control

From there we got a tour of the remainder of the ship.

One of the ship's massive generators

One of the ship’s massive generators

A water pump for a fire station

A water pump for a fire station

A transformer to convert all that electrical energy

A transformer to convert all that electrical energy

The Oscar Dyson creates ALOT of energy. Here is a read out for one of the many generators on board. Take a look at the Amps produced.

818.6 Amps!

818.6 Amps!

A ship this big also has multiple fuel tanks. Here the engineers can choose which tank they want to draw from. Interesting also is the engineers have ballast tanks to fill with water to compensate for the fuel the ship uses. Alan also showed us the log book for this, as ships taking on ballast water can be an environmental issue. The crew of the Oscar Dyson follows this protocol as set forth by the United States Coast Guard. You can learn more about that protocol by clicking here

Fuel tank selection

Fuel tank selection

Our last stop was seeing the bow thruster. It was a tight space, but the bow thruster can actually power the ship if the main engine loses power.

In the bow thruster room

In the bow thruster room

Here are some other pictures from the tour:

Nikki, Alan, and I in the engine room

Nikki, Alan, and I in the engine room

A serious pipe wrench

A serious pipe wrench

This surface is squishy and covers the entire engine room. It makes the boat super quiet!

This surface is squishy and covers the entire engine room. It makes the boat super quiet!


 

After our tour, it was back to business as usual, the Walleye Pollock Survey. Our Chief Scientist spends countless hours analyzing the acoustics data then sampling the fish.

Our Chief Scientist, Dr. Patrick Ressler analyzing the acoustic data from the survey

Our Chief Scientist, Dr. Patrick Ressler analyzing the acoustic data from the survey

The Walleye Pollock which we are studying is a very integral part of the Alaskan ecosystem, as well as a highly monetary yielding fishery. One thing I noticed almost immediately is the color change between juveniles and adults. It is theorized that as the fish get older, they move lower in the water column towards the bottom, thus needing camouflage. Take a look at this picture that shows a mature Walleye Pollock and it’s juvenile counterparts.

The adult Walleye Pollock gets "brassy" spots on it's body.

The adult Walleye Pollock gets “brassy” spots on it’s body.

You can learn more about the life cycle of Pollock by clicking here.

Here is another site with some useful information on Pollock, click here.


Personal Log: 

Working on the deck of the Oscar Dyson is no laughing matter. What is required to step on deck? A hard hat, float coat, and life jacket. Watching the deck crew, controlled by the lead fisherman, is like watching an episode of Deadliest Catch… just without the crabs. Giant swells that make the boat go up and down while maintaining a solid footing on a soaking wet deck is no joke. My hat is off to our hard working deck crew and fisherman.

 

The deck crew and fisherman deploying an Aleutian Wing Trawl

The deck crew and fisherman deploying an Aleutian Wing Trawl

Fisherman Brad Kutyna retrieving an Aleutian Wing Trawl

Fisherman Brad Kutyna retrieving an Aleutian Wing Trawl

The best part about fishing, is it is just that, fishing. NOAA sets the standard when reducing by-catch (fish you do not want to catch), but sometimes a fish’s appetite gets the best of him/her.

This Pacific Cod ended up in our Aleutian Wing Trawl, it wanted Pollock for lunch

This Pacific Cod ended up in our Aleutian Wing Trawl, it wanted Pollock for lunch

These Pacific Cod were 8 pounds each.

These Pacific Cod were 10 pounds each.

Fishing has always been apart of my life. My Grandfather always said, “If the birds are working, you will find the fish.” A good piece of advice… Look for circling gulls and chances are a group of bigger fish has some bait fish balled up under the surface.

Here the birds are working off the stern of the boat

Here the birds are working off the stern of the boat


Meet the Scientist: 

On board the Oscar Dyson this part of the Walleye Pollock survey is scientist Tom Weber. Tom lives in Durham, New Hampshire and is here to test new custom acoustic equipment. Tom is married to his wife Brinda and has two sons, Kavi and Sachin.

Tom has a Bachelor’s and Master’s degree in Ocean Engineering from the University of Rhode Island. He attained his PhD in Acoustics from Penn State in State College, PA.  Currently Tom is an Assistant Professor of Mechanical Engineering at the University of New Hampshire. He also is a faculty member of the Center for Coastal and Ocean Mapping (CCOM for short). Both places of employment are located in his hometown of Durham, New Hampshire.

Tom explaining the brand new acoustic technology

Tom explaining the brand new acoustic technology

Tom has been affiliated with NOAA and their projects since 2006 and is here to test a custom Acoustic Transducer (a piece of technology that sends out a signal to the ocean floor) and sonar transceiver. As he explained to me, this technology sends out a multi-band frequency and the echo which returns could potentially identify a species of fish hundreds of meters below the boat. He is also here to study Methane gas seeps found along the convergent boundary in the Aleutian Islands.  Methane gas seeps are of particular curiosity on this trip because of their unique properties.

Tom busy at work in the Acoustic Lab on board the Oscar Dyson

Tom busy at work in the Acoustic Lab on board the Oscar Dyson

On a side note, Tom saw the first grizzly bear of our trip just hanging out on one of the many coastlines we have passed. He said being on the Oscar Dyson is “Not like being in Beaver Stadium, but the ship moves as much as your seats do during a game.”  When I asked Tom for any words of advice, he said: “Never name your boat after a bottom fish.” Apparently that is bad luck.

A methane gas seep on the ocean floor makes quite a disturbance. Here Chris Bassett is observing what it looks like.

A methane gas seep on the ocean floor makes quite a disturbance. Here Chris Bassett is observing what it looks like.

Tom loves working side by side with the scientists on this study and is ecstatic to see this new technology being used on this survey.


Meet the NOAA Corps Officer: 

Meet Lieutenant Carl Rhodes, the Oscar Dyson’s Operations Officer, and acting Executive Officer for this part of the Walleye Pollock Survey. LT Rhodes is from Bayfield, Colorado and joined the NOAA Corps to use his degree in science. LT Rhodes has a Bachelors degree in Marine Science with an Associates Degree in Small Vessel Operations from Maine Maritime Academy in Castine, Maine. LT Rhodes also has a Masters of Science in Facilities Management from Massachusetts Maritime Academy.

His job as Operations Officer on board the Oscar Dyson includes:

  • Ensuring all scientific operations are conducted safely and efficiently.
  • Act as a liaison between all members of the ship’s crew and scientific parties.
  • Record and observe all scientific missions during the day.

His extra duties as acting executive officer include:

  • Managing the ship’s personnel and human resources
  • Taking care of payroll and travel requests
  • Supervising junior officers and crew members
Lieutenant Carl Rhodes on the bridge of the Oscar Dyson

Lieutenant Carl Rhodes on the bridge of the Oscar Dyson

Hands down, the best job of all not mentioned above is driving the boat! All officers stand watch (aka drive the boat) for two, four hour shifts a day. Not to mention all the other work they are required to do. Being a NOAA Corps officer is no easy job. LT Rhodes has the goal to one day be the Captain of a NOAA research vessel.

In his free time, LT Rhodes enjoys scuba diving, climbing mountains, hiking, camping, biking, photography, and flying drones. LT Rhodes shared with me how he has overcome many obstacles in his life. His words of advice to any student are: “Anyone can get anywhere if they try hard and really fight for it.”

LT Rhodes and all the rest of the crew of the Oscar Dyson have not had a day off yet on this research cruise, and work 12 hour shifts around the clock. Seeing this first hand has given me much respect for the type of work NOAA does!


 

Did You Know? 

Seafood is a billion dollar industry in Alaska, with more than half of U.S. commercially captured fish caught in the state nicknamed “The Last Frontier.” According to Alaska’s Department of Labor and Workforce, around 32,200 people fished commercially in Alaska in 2011, averaging 8,064 people per month. Salmon harvesting represents half of all fishing jobs in Alaska, with ground fish and halibut following in second and third place, respectively, according to the state’s labor bureau. Read more here.


 Thanks for reading my blogs! I am hooked on Alaska and would love to come back! I will see you all soon in Delaware!

David Walker: Slowly Getting the Hang of Things (Days 3-5), June 29, 2015

NOAA Teacher at Sea
David Walker
Aboard NOAA Ship Oregon II
June 24 – July 9, 2015

Mission: SEAMAP Bottomfish Survey
Geographical Area of Cruise: Gulf of Mexico
Date: Monday, June 29, 2015

Weather Data from the Bridge

Weather Log 6/28/15

NOAA Ship Oregon II Weather Log 6/28/15

Weather remained quite calm through Days 3-5.  I observed a couple minor rain showers during the night shift.  As noted in the above weather log from the bridge, hazy weather (HZ) on multiple occasions during Day 4.  Sky condition on Day 4 went from 1-2 oktas in the morning (FEW), to 5-7 oktas (BKN), to 8 oktas (OVC) by midday.  The sky cleared up by the evening.

Science and Technology Log

Day 3 was incredibly busy.  There were no breaks in the 12 hour shift, as there were many trawl stations, and each catch contained a very large amount of shrimp.

According to many on deck, the shrimp catches on Day 3 would have been deemed successful by commercial shrimping standards.  I got lots of good practice sexing the shrimp from the catch — I sexed over 2000 shrimp on Day 3 alone.  Sexing shrimp is fairly easy, as the gonads are externally exposed.

I also learned how to sex crabs.  This is also a simple process, as there is no cutting involved (see graphic below).  The highlight of the day was the landing of a really large red snapper.  They let me take a picture with it before taking it inside for processing.  I was absolutely exhausted at the end of Day 3 and completely drenched in a mixture of sweat, salt water, and fish guts.

Day 4, in contrast, was very slow.  The trawl net broke on one of the early stations, so the research was delayed for quite awhile.  In fact, in my entire 12 hour shift, we only had to process two catches.  We were able to complete all CTD, bongo, and Neuston stations, however, quite efficiently.  I have gotten to the point where I can serve as the assisting scientist for the CTD, bongo catch, and Neuston catch on my own.  This data also requires two fisherman on hand — one to operate the crane, the other (along with me) to guide the device or net into the water.  The fishermen with whom I most commonly work are Lead Fisherman Chris Nichols, Skilled Fisherman Chuck Godwin, and Fisheries Methods and Equipment Specialist (FMES) Warren Brown (see photo).

On Day 5, I got great practice sexing a wide variety of fish.  An incision is made on the ventral side of the fish, from the anus toward the pectoral fin.  After some digging around inside the fish, you will find the gonads — either ovaries (clear to yellowish appearance with considerable vasculature, round in cross-section often many eggs) or testes (white appearance, triangular in cross-section).  As you might guess, larger fish are much easier to sex than smaller ones, and the ease of sexing is also species dependent.  To make matter even worse, many fish are synchronous hermaphrodites (containing both male and female sex organs), and some are protogynous hermaphrodites (changing from female to male during the course of life).  The ease of sexing is also species dependent.  For instance, I have found the sexing of adult puffer fish and lizardfish to be quite easy (very easily defined organs), however I have experienced considerable difficulty sexing the Atlantic menhaden (too much blood obscuring the organs).

Field Party Chief Andre DeBose provided me with a hypoxia contour chart (see below), representing compiled CTD data from Leg 1 and the beginning of Leg 2.  According to DeBose, these contour charts are generated by the National Coastal Data Development Center (NCDDC) once out of around every 10 stations, and they represent an average of data taken by station near the ocean floor.  A data point is defined as hypoxic if the dissolved oxygen content is below 2 mg/L.  On the below chart, you can see that many hypoxic areas exist along the Texas coast, near the shore.

Bottom Dissolved Oxygen Contours

Dissolved oxygen contours for water at ocean bottom — Plotted data thus far from the SEAMAP Summer Survey (June 9 – 26, 2015)

I could not wrap my head around why this trend exists in the data, as I figured that shallower water would be warmer, allowing for more plant life in greater density, and accordingly more dissolved oxygen in greater density.  Fisheries Biologist Alonzo Hamilton helped me better understand this trend.  The fact that the water is warmer in shallower areas means that more of the dissolved oxygen leaves the surface of water in these areas.  In addition, while plant life is indeed in greater concentration in shallower water, so is the concentration of aerobic microbes.  These organisms use up oxygen through respiration to decompose organic matter.  You can see on the above graphic that the greatest hypoxia is found in areas near major runoff (e.g. Matagorda Bay and Galveston Bay).  Among other things, this runoff feeds nitrates from plant fertilizer into the ocean, which supports growth of more algae (in the form of algal blooms).  Aerobic microbes decompose this excess organic matter once it dies, taking further oxygen from the water. Although it seems counterintuitive, at least to me, the greater heat and greater organism density actually leads to a more hypoxic environment.

I am slowly getting better with the species names of aquatic organisms, but as of now, I am still focusing on common names.  The common names often relate to the fish’s phenotype, and this helps me recall them with more ease.  Common name knowledge, however, is fairly useless when it comes to entering the organisms into the computer during species counts, as the computer only has scientific (Latin) names in its database.  I hope to learn more scientific names as the week progresses.

I am also slowly amassing a really interesting collection of organisms to take back with me to LASA High School.  CJ Duffie taught me how to inject crabs with formaldehyde to preserve them.  Upon return to port, I will spray these crabs with polyurethane, to preserve the outer shell.  I have also been preserving different organisms in jars with 20/80 (v/v) formaldehyde/saltwater.  If you know me, you know I love collecting things, so this process has been particularly enjoyable.  Fisheries Biologists Alonzo Hamilton and Kevin Rademacher have been very supportive in helping me collect good specimens for my classroom.

Personal Log

Life on the ship is very enjoyable.  My bed is comfortable, the work is exciting, the meals are excellent, and the company is gregarious.  However, I have completely lost track of time and date.  My “morning” is actually 11 PM, and my “evening” is actually 1 PM.  Accordingly, my “lunch” is actually breakfast, and my “breakfast” is actually lunch.  I also never have any idea what day of the week it is.  I called my girlfriend yesterday and was surprised to hear that she was not at work (it was a Sunday).

Regarding this blog, I have finally found the optimal time to write and upload photos.  As the satellite internet is shared by all of the ships in the area, it is not possible to access WordPress during the daytime.  Accordingly, I do all of my uploading and most of my writing between 2 and 6 AM.  This works for me, as long as I can find time for the blog between research stations.

I really enjoy the people on the night shift.  Kevin Rademacher, Alonzo Hamilton, and Warren Brown provide such a wealth of knowledge.  These three are absolute experts of their craft, and it is a true honor to work with them.  I am nearing the end of my first week on the ship, and I am still learning just as much as I was on my first day – this is incredibly exciting.

I have found that Alonzo really enjoys the TV show, “Chopped,” as it seems to be on every time I enter the dry lab.  It is pretty interesting to observe him watching the show, as he enthusiastically comments on all of the dishes and regularly predicts the correct winner.

I am also getting well through one of the books I brought – Everything is Illuminated, by Jonathan Safron Foer.  It is a very odd read, but it has been enjoyable so far.

I am looking very forward to every new day.

Did You Know?

The scorpionfish that we are catching are some of the most venomous creatures in the world (see Scorpaenidae) .  These fish have spines that are coated with a venomous mucous, and their sting is incredibly painful – just ask CJ Duffie!  These fish are also incredible masters of camouflage, changing in color and apparent texture to disguise themselves, so as to catch more prey.

Notable Species Seen


David Walker: Lots to Do, Lots to Learn (Days 1-2), June 26, 2015

NOAA Teacher at Sea
David Walker
Aboard NOAA Ship Oregon II
June 24 – July 9, 2015

Mission: SEAMAP Bottomfish Survey
Geographical Area of Cruise: Gulf of Mexico
Date: Friday, June 26, 2015

Weather Data from the Bridge

Weather Log 6/26/15

NOAA Ship Oregon II Weather Log 6/26/15

Weather was quite calm on Days 1 and 2.  As noted in the above weather log, the only real disturbance was a small squall (SQ) observed at 7 AM on Day 2.  Sky conditions are estimated in terms of how many eighths of the sky are covered in cloud, ranging from 0 oktas (completely clear sky) through to 8 oktas (completely overcast).  FEW in the above log represents 1-2 oktas of cloud coverage.  SCT represents 3-4 octas, and BKN represents 5-7 oktas.

Science and Technology Log

I have been assigned the night watch, which runs from 12 midnight to 12 noon.  Accordingly, on Day 1, I went to sleep around 2 PM and woke up around 10 PM to prepare for watch. My first day consisted mostly of general groundfish biodiversity survey work, one of the focuses during the summer being on shrimp species.  Data collection points have been randomly plotted throughout the Gulf, and data is collected via trawling the seafloor, which consists of the boat pulling a fishing net behind the boat, along the seafloor, for a predetermined length of time.  To allow for collection along the seafloor, the net has rollers on the bottom.  The net also contains a “tickler chain” to stir up organisms (mainly shrimp) from the seafloor, so that they can be captured with the net. The trawl catch is transferred to the boat, where the following steps are completed:

Tranferring catch to boat

CJ Duffie transferring a trawl catch to the boat.

1. The total catch is weighed.
2. The catch is run along a belt, and the three significant shrimp species (white, brown, and pink) are taken out and saved. In addition, multiple unbiased samples are taken from the catch and saved.  The sample should contain at least one of each species encountered in the catch.
3. The entire taken sample is sorted by species.
4. Individuals within each species are counted.
5. Length, weight, and gender are recorded for shrimp individuals within a significant species (white, brown, and pink).
6. Length measurements are taken for all other species individuals within the sample. Weight and gender are recorded for one individual out of every five within a species, for species other than shrimp.
7. Everything is returned to the ocean.

Sorting by species

Sorting the catch by species along the belt. Left to Right — Volunteer CJ Duffie, Equipment Specialist Warren Brown, me, and Research Fisheries Biologist Kevin Rademacher.

On Day 1, we completed the above process for 4 separate catches.  Aside from my lack of knowledge, the only other mishap was that my middle finger accidentally got pinched by a fairly large Atlantic Blue Crab.  I was amazed at the amount of force of the pinch, as well as the amount of pain caused.  I ended up having to break the crab’s claw off in order to free myself.

Also on Day 1, I got to observe the CTD (Conductivity, Temperature, Depth) sensor in action.  A CTD’s “primary function is to detect how the conductivity and temperature of the water column changes relative to depth” (NOAA).  The salinity of the seawater can be determined from this conductivity and temperature data.  On the Oregon II, the CTD also contains a dissolved oxygen sensor for measuring levels of dissolved oxygen in the seawater.  In addition, the CTD is housed in a larger metal frame (called a “rosette”) with water bottles, allowing for sampling at various depths.  Various data collection points have been randomly plotted throughout the gulf, and data collection consists of sending the CTD (+ dissolved oxygen sensor and water bottles) to and from the ocean floor.  The photo at right shows the data output – the y-axis represents water depth, temperature is recorded in blue (two data points taken at each scan), salinity is recorded in red, and dissolved oxygen is recorded in green (2 data points taken at each scan).  The ocean floor was at a very shallow depth (between 10 and 20 meters) for all sampling done on Day 1.

CTD data output

CTD data output

On Day 2, we completed more shrimp survey work and CTD sampling.  I also got to participate in a plankton survey at the beginning of my shift.  This entailed dropping two fine-mesh nets into the water – a dual-bongo and a neuston – and dragging them through the water to collect plankton.  The dual-bongo is lowered to a predetermined depth, while the neuston remains at the surface.  Obtained plankton is transferred to a jars with salt water and formaldehyde (for preservation) and sent to a lab in Poland (with which NOAA has a partnership) where it is categorized, measured, etc.

Personal Log

I have already met all of the scientific personnel and most of the other core and crew on the ship.  Andre Debose is the Field Party Chief, and he heads up all scientific operations on the ship.  The Executive Officer of the ship is Lieutenant Commander (LCDR) Eric Johnson, a NOAA Corps Officer.  These are the two people who approve of all of my blog posts before I submit them to NOAA. The night watch (12 AM – 12 PM) consists of me, Kevin Rademacher, Warren Brown, and Alfonso Hamilton (watch leader).  The day watch (12 PM – 12 AM) consists of Adam Catasus, Jeffrey Zingre, Joey Salisbury, and Michael Hendon (watch leader).  CJ Duffie completes his watch from 6 AM to 6 PM. Adam, Jeffrey, and CJ are volunteer graduate students from Florida.  This is their first NOAA research cruise, but they have already completed a two-week leg, so they know much more than I do.  Alfonso, Kevin, Warren, Adam, and Joey are all seasoned NOAA veterans, have completed many years of research cruises, and have a wealth of knowledge.

Stateroom

My stateroom

My stateroom is quite nice.  There is sufficient storage space for all of my clothing and equipment, such that I am able to keep most everything off of the floor.  I am rooming with Joey Salisbury (I have top bunk), but as Joey is on the day shift, we do not see too much of each other.  I am quite paranoid about not waking up on-time, so I tethered my cell phone to a pipe on the boat, directly above my head.  This way, the phone alarm blares directly toward my face, and there is no danger of my phone falling off of the bunk.

I have not yet experienced any seasickness, although I am still taking preventative medication every day.  Andre noted before we left that ginger helps with seasickness, so I brought some ginger ale and ginger cookies.

The food served on the ship is amazing, definitely much more than what I was expecting.  There are multiple course options for each meal, and everything I have had so far has been exceptional.  The highlight was the made-to-order omelet that I had for breakfast after 7 hours of sorting and measuring fish.

Notably, I also got to experience two boat safety drills on Day 1 – a fire drill, and an abandon ship drill.  For the abandon ship drill, I got to try on my survival suit.  It is made out of neoprene, so in that regard it reminds me of fly fishing waders.  However it feels quite claustrophobic once you put your arms in it and zip it
halfway up your face.  I needed much assistance in putting it on.

Survival suit

In my survival suit, during an abandon ship drill

Did You Know?

NOAA has a Commissioned Service, one of the seven Uniformed Services of the United States.  The NOAA Corps consists only of Commissioned Officers (i.e. no enlisted personnel or Warrant Officers).  The Corps first became a Commissioned Service in 1917, during World War I, as the United States Coast and Geodetic Survey Corps.  In 1965, this Corps was renamed the Environmental Science Services Administration Commissioned Corps, and in 1970, was again renamed the NOAA Corps (Source — NOAA).

Notable Species Seen

Bill Henske, Sharks and Minnows, June 25, 2015

NOAA Teacher at Sea
Bill Henske
Aboard NOAA Ship Nancy Foster
June 14 – 29, 2015

Mission: Spawning Aggregation Survey
Geographical Area: Florida Keys and Dry Tortugas

Date: Wednesday, June 24, 2015

Weather Data from the Bridge: East to southwest winds 15-20 kts. Decreasing to 10 to 15 kts.  Seas 3 to 5 ft. Isolated showers and thunderstorms.

Science and Technology Log

Integrated Tracking of Aquatic Animals of the Gulf Coast

One of the best games you can play in the pool is Sharks and Minnows. The premise of this game is that you and your school are small fish that have to travel from one side of the pool to the other without getting caught by the shark. If you are caught you get turned into a shark for the next round.  Eventually the sharks are well distributed, preventing any minnows from getting through.

Acoustic Monitoring Arrays in the Florida Keys National Marine Sanctuary

Acoustic Monitoring Arrays in the Florida Keys National Marine Sanctuary

I am reminded of this as the fin fish team from FWC sets up a grand game of sharks and minnows for fisheries science.  Over the past week we have been setting up several arrays of acoustic receivers that catch tagged fishes’ signals as they swim through the Florida Keys reef system.  The plan is designed to capture fish moving within and between different parts of the ecosystem.  Any tagged fish coming into Florida Keys National Marine Sanctuary should come into contact with one of the receivers, as will any fish traveling out.  The placement of the receivers on the west and east of the sanctuary create and “entrance” and “exit” for tagged fish.

Within the sanctuary there are now several concentrated grids of receivers in places that make for good fish habitat (aka good fishing spots).  The VR2 receivers can record the identification number of the tagged fish as well as the time and date they connected to the receiver and their distance from the receiver.  When the receivers are collected, that data can be downloaded and a picture of fish movement created.  The data from the FWC’s arrays and tagged fish will be incorporated into a more extensive project called ITAG (Integrated Tracking of Aquatic Animals of the Gulf Coast).   In this project, collaborators share their acoustic tag data and receiver logs with each other, extending the reach of all project.   In the vastness of our marine environments, any one project will produce only a small snapshot of what is happening.  By collaborating between projects, the complexity of fisheries and ecosystems might be more easily untangled.

Sonar profile of one of our sites for an acoustic release receiver.

Sonar profile of one of our sites for an acoustic release receiver.

Today we set up individual stations of a new device which uses an acoustic release.  These are for much deeper sites containing “humps” which are relief features rising 100 to 200  feet about the surrounding sea floor.  Because of the relief, humps offer a large variety of habitats in a small amount of space, creating a highly diverse area for aquatic life.  Since these deeper areas are inaccessible to most divers, the receivers we set out can be triggered to return to the surface.  When data is ready to be collected in a few months, a device will be lowered into the water that communicates with the receiver using sound.  This device, called a VR100, can trigger the receivers to jettison themselves to the surface with the help of two small floats.  At that time the receivers can be collected from a small boat.

Joel from FWC checks the connection to an acoustic receiver that has just been dropped to the sea floor.

Joel from FWC checks the connection to an acoustic receiver that has just been dropped to the sea floor.

This video below shows our deployment of the acoustic release receiver from the side of the Nancy Foster.

 

Personal Log

City in the Sea

The Nancy Foster has been at sea since February of this year.  While it resupplies every few weeks, most of the vital functions for human habitation are performed on board.  The ship is, for its officers, crew, and science passengers, a small floating city.

View of the engine room control panels.

View of the engine room control panels.

Electricity requirements for a large ship are quite high.  If you factor in air conditioning, navigation systems, lighting, motors and pumps, kitchen, and scientific tools, the energy consumption equals a small hamlet.  Amazingly, this electricity is all created on board with the ship’s generator and a copious amount of marine diesel.

The Nancy Foster has a main engine for thrust but several others that act as generators for the thrusters, electricity, and backup power.

The Nancy Foster has a main engine and several others that act as generators for the thrusters, electricity, and backup power.

Food is loaded on at ports but that doesn’t mean it isn’t fresh and delicious.  Each day Bob and Lito prepare breakfast, lunch, and dinner for all of the scientists and crew.  These delicious multi-course meals keep all the members of this floating city very happy.  Just like the hungry generators, the humans energy levels are kept well stocked.

Water, water everywhere but not a drop to drink, except on the Nancy Foster you can just distill it using excess engine heat.

Water, water everywhere but not a drop to drink, except on the Nancy Foster you can just distill it using excess engine heat.

There is no sewage processing on board the ship.  Ship waste is carried in large tanks until it can be released into open ocean, far from land.  Once in the ocean, its nutrients are quickly consumed by hungry phytoplankton and converted into energy for the next level of the food chain.  Food waste is also separated from recycling and “garbage”.  Food waste, after being ground, is composted at sea.

With 40 people on board eating, showering, and using the head, the ship needs to produce water on a continual basis.  The ship keeps a reserve supply and when it goes down, The Nancy Foster has a device that uses excess heat from the engines and generators to distill water from the ocean.

Every day the Science Chief and project leaders determine a schedule and make staff assignments.

Every day the Science Chief and project leaders determine a schedule and make staff assignments.

Cities need organization and a specialized workforce to get all of these things done.  The NOAA Corps Officers make sure the ship stays on course and its mission objectives are met.  The ships crew ensures the small craft are launched safely, everyone is fed, and the ship keeps humming and running smoothly.  The science staff are visitors, enjoying all of the amenities of the ship while using its resources to complete their scientific missions.  Many of the science staff cruise with the Nancy Foster every year, while for some, it is their first time.

How did you get here?

I asked several of the scientists on board what they wanted to do when they were in middle school and how they became involved in marine science and research.  My middle school students are just starting to think about who they are and who they want to be.  I wanted to get some background information on how some of the scientists here got their start.

J. – A biologist had no clue what he wanted to do when he was in middle school and this trend continued until college! He loved fish and applied for an entry level fisheries job and has been at it ever since.

R. – Thinks she wanted to be a writer in middle school based on a paper she read from back then.  After pursuing her interest in ecology she is now writing about conservation issues for NOAA.

S. – She always loved science and math – After studying geology she had a chance to go to sea.  Loved it more than her geology work and now scans the sea floor of the Gulf of Mexico.  She won’t tell you where the treasure is!

P. – He took a test when he was in middle school that said he was not particularly interested in anything.  What he always liked was fish. After a couple related jobs he has worked in fisheries for many years.

S. – When he was in middle school he wanted to be rich and work in biology.  He now works in biology!

One of the major commonalities among the scientists is that they followed, or in some cases, rediscovered their interest.  As a teacher, I hope I can help my students find what they are passionate about.

By the numbers:

226 scuba dives
5 ROV dives
5 Reef Visual Census (RVC) surveys
20 Drop camera ‘dives’
40 New stands and receivers deployed
4 sea turtles
61 square miles of seafloor mapped
1 Teacher at Sea Hat not lost

Trevor Hance, Gone Fishin’, June 24, 2015

NOAA Teacher at Sea
Trevor Hance
Aboard R/V Hugh R. Sharp
June 12 – 24, 2015

Mission: Sea Scallop Survey
Geographical area: New England/Georges Bank
Date: June 24, 2015

Gone Fishin’

Lean and mean, the Leg III Scallop Survey Class of 2015

Lean and mean, the Leg III Scallop Survey Class of 2015

Unfortunately, as is the case with life at sea, the weather can change in a heartbeat and the seas apparently had enough of the spoon feeding we were enjoying.  Our last couple of days were supposed to be spent exploring some new lobster habitat, but it just wasn’t in the cards for us and our cruise was terminated a day or two earlier than anticipated.

When the weather got harsh while heading in, I asked our Captain if he would take a picture of me in the Crow’s Nest, doing my best Lt. Dan impression.  He just smiled, shook my hand; “No” was all he said.

When the weather got harsh while heading in, I asked our Captain if he would take a picture of me in the Crow’s Nest, doing my best Lt. Dan impression.  He just smiled, shook my hand; “No” was all he said.

I’m off the vessel, but, the learning is still sinking in.  Today I’ll visit a little about the importance of annotating photos and round out the discussion with some explanation of how these scallop surveys play in commercial fisheries management, and then I’ll cut you loose for the summer.

Ropes, used on hatches, which we may or may not have battened.

Ropes, used on hatches, which we may or may not have battened.

Questioning the Data

We’ve been doing science 24/7 while at sea, and even with twelve highly accomplished people in the science party, I know we only scratched the surface and these folks have mountains of work ahead of them back at their offices in Woods Hole. I also know that much of that work will involve healthy doses of pretty complex math.  I saw an episode of NOVA recently that said something like “science is the story of everything, but the language of that story is told through mathematics.”  Let kids do science; through those experiences, they’ll learn more and ask more questions than they can answer and before they realize it, have learned a ton of math – and how to solve their own problems.

Wet-lab whiteboard humor

Wet-lab whiteboard humor

Before these scientists can really dig in on the heavy math, the data we were collecting has/had to be sorted and organized appropriately. On the dredge, we did most that in the wet-lab, where we physically counted, classified, measured and weighed the species we caught. While using HabCam, we were in the dry lab and the photos and data was collected on the PCs connected to the fiber-optics cable.

What’s up Watch Chief! That’s the wet lab, which is a trailer set up between the vestibule and dredge deck

What’s up Watch Chief! That’s the wet lab, which is a trailer set up between the vestibule and dredge deck

Dredge Data

The hands-on, real-person data collection associated with the dredge is important in fisheries science for many reasons.  For example, estimated weights of things seen in the HabCam photos can only be estimated with any degree of accuracy if they are based on actual data.  Additionally, there are some things you simply cannot determine through non-invasive means, as I experienced first hand assisting Dr. Gallager in the wet lab.  While weighing and measuring the organs of his scallop sample we saw that scallop populations in warmer water had spawned, but some of those in deeper/colder water had not yet done so.  People like Drs. Gallager and Shank can use that information and combine it with data relating to currents and historical data as they develop hypothesis of where to expect scallop populations (they call them “recruitments”) to develop in the future.

A simple graph showing fish length

A simple graph showing fish length

One of my jobs was to be in charge of a tool called “Star Oddi” which consists of a small, bullet-shaped underwater data logger that collects information such as temperature, depth, salinity and tilt of the dredge (it does get flipped over from time to time) as it is towed along the sea floor.  I would trade out the data-logger between each dredge, upload the data to a PC, and tell our watch chief if I noticed anything outside of the expected ranges.

Physically counting and measuring the weight of starfish helps establish reliable estimates of predator affect on scallop population

Physically counting and measuring the weight of starfish helps establish reliable estimates of predator effect on scallop population

HabCam Data / Annotation

Between times piloting the HabCam, we would help annotate some of the photographs, identifying substrate and species seen in the individual photos. For scallops, we used the mouse to draw a line indicating the size of each scallop.

There are four scallops in the annotated photo below.  I’ve drawn a line (in green) from the scallop’s umbo to the front of their shells, or across their width if they didn’t completely fit on the screen. The shadows could also help us identify whether they were swimming or stationary on the sea floor.  Using the HabCam’s recorded distance from the ground, the computer could then determine their respective sizes with relative certainty, which will help scientists estimate their respective weights, which all plays into determinations of how many scallops there are and whether the species, as a whole, is healthy.

Data, informing decisions

Data, informing decisions

The mosaics of HabCam photos sometimes reminded me of stars in the night time sky

The mosaics of HabCam photos sometimes reminded me of stars in the night time sky

I’ll share some more photos taken while annotating in the photblog, for now, let’s put my degrees in economics and law to use…

Fisheries

Many people hear the word “fishery” and think of a plants and a “nursery,” and they are similar in that they are places where something is raised for commercial purposes, but, most fishery production occurs in what would be considered publicly accessible water, like the ocean.

In our earlier discussions, you realized that with its favorable water and currents, Georges Bank is ripe territory for marine life, and historically, Georges Bank has been considered the world’s most productive fishery.  Indeed, Georges Bank has played a key role in the culture and economy of New England for more than 400 years. An April 2012 issue of Down East magazine (note to folks who don’t have a “Mainah” for a mom:  “Down East” is a slang term typically applied to the upper east coast of Maine) noted that by the time of the Mayflower voyage, the cod fishing stations at Damariscove and Monhegan islands had been operating year-round for the better part of a decade.

But just like my trip aboard the Sharp, all good things must come to an end, and over the past century, the environment has changed, human populations grew, demand increased, and technology made fishing faster, safer, bigger and more predictable.  Fortunately, they still call it fishing…

…I mean, if you caught one every time, they’d change the name to “catchin’!”

…I mean, if you caught one every time, they’d change the name to “catchin’!”

Texas Standards: A Teachable Moment

In Texas, we are tied to state standards called “Texas Essential Knowledge and Skills,” or “TEKS.”  One of our G5 TEKS states that by the end of the year, “The student is expected to predict the effects of changes in ecosystems caused by living organisms, including humans, such as the overpopulation of grazers or the building of highways.

Locally, my students are in the middle of a real world study of this TEKS, as a recently elected Austin city councilman has proposed a road through the middle of the Balcones Preserve behind our school, saying the road will provide a “fire break.”  As you might imagine, the idea has gotten the attention of some local interest groups and home owners in the neighborhood around the school.

For the lesson, my students were told that their role was simply to read the articles about the proposed road and combine it with existing knowledge gained in my classroom, follow the TEKS, and predict changes to the ecosystem if the road is ultimately built.

Photo from fourpointsnews.com

Photo from fourpointsnews.com

While for my students, their predictions relate to the “highway” aspect of the TEKS, “overgrazing by humans” and the idea of “a ship highway” in the seas offer some parallels to the fisheries we’ve been surveying on this cruise.

Back to the Bank

For nearly 350 of the 400 years commercial fishing has been happening off the coast of New England, regulations were negligible, and the area experienced heavy fishing by American fishers as well as vessels from other countries.  It wasn’t until 1976 that the federal government adopted the Magnuson Fishery Conservation and Management Act, which gave the United States the exclusive economic zone that includes Georges Bank and set up a system of industry regulation.

While the Act gave the U.S. government some power to regulate fishing in the area over the long term, the initial intent was aimed more at helping to protect American fishers more than the fish, and in the first 20 years of the Act, the fish continued to suffer.  In the 1990s, protection efforts picked up, and in 1996, President Bush amended the Act to better promote conservation by focusing on rebuilding overfished fisheries, protecting essential fish habitat, and reducing bycatch (which is the catching of fish you aren’t actually trying to catch.)

There are four or five main players in the equation, with each having a fair and logical argument of why their interests should receive priority:

  • Fishermen:  In one chair sit the fishermen and the people who work for them.
  • Companies: In another chair sit the non-fishing companies who meet market demand, buying, selling, processing, transporting, etc., seafood.
  • Consumers: In another chair sits the consumers who buy and eat seafood.
  • Environmental/non-profit groups: Standing on a truffula tree stump, speaking on behalf of the fish.
  • The last chair belongs to the government:  “of the people, by the people, and for the people.”

Whoa, what’s up with the blood pressure spike? Did I strike a chord?

I’ll let you work out in your mind whom you believe should get priority… (note: If you get it right, you might pass fifth grade and get your PhD in one fell swoop!)

Specifically, Scallop

Today, when it comes to management of the scallop fishery, NOAA Fisheries is the lead agency, while the New England Fishery Management Council assesses and makes policy recommendations for the Northeast, and the Mid-Atlantic Fishery Management Council does so for the area down to the Mid-Atlantic region. These organizations have implemented several management tools intended to support conservation.  Some examples of regulatory tools they’ve used include:

  • Regulating the number of vessels allowed to fish for scallop and people aboard those vessels;
  • Regulating the length of a fishing season and limiting days vessels can remain at sea;
  • Regulating the amount of fish that can be caught as well as the amount of bycatch allowed
  • Closing areas to fishing; and,
  • Increasing the size of the rings on the dredge-net (note: recall, the dredge is like a big sieve; bigger holes allow smaller things to filter through)

Through these management efforts, scallop populations have rebounded significantly, with the permitted (dredge-net) ring-size, limitation of days at sea/total allowable catch, and “closed-area” management tools getting much of the credit. The rebound is certainly noteworthy considering that the Atlantic Sea Scallop fishery, which extends from the Mid-Atlantic area near Cape Hatteras, NC up to Georges Bank, is the largest and most valuable wild scallop fishery in the world, valued at nearly $580 million in 2011.

While much of the research and management is funded by the government, it is important to acknowledge the commercial fishery’s contribution through the Scallop Research Set-Aside Program.  Through that program, 1.25 million pounds of the allowed scallop harvest is set aside each year to fund scallop habitat research and surveys to better inform future policy/management decisions.

So, What’s Next?

Well, that’s the million-dollar question, isn’t it?

Scallop populations have responded well to these regulatory/management efforts, while other species, such as cod, continue to struggle mightily.

As the scallop population returns to (and maybe even starts to exceed) what have been called “sustainable numbers,” the “closed areas” management tool presents some unique questions, primarily relating to an idea called “carrying capacity.” Carrying capacity essentially asks “how many scallop can survive here before there are too many for the system to stay healthy?”  For the fishers, the water can seem bluer on the other side of the fence (or, um, something like that) and they want to see these areas re-opened, but variables have to be considered and data confirmed for conclusions to be both reliable and valid.  In other words, there is a risk of irreparable harm if an area is opened for fishing too soon or too late.

I mention carrying capacity because while I was aboard the Sharp, the New England Fisheries Management Council announced that it was going to recommend that one of the closed areas of Georges Bank, known as the Northern Edge, be reopened to fishing.  The newspapers I read showed that there has been a predictably mixed reaction to the announcement.  NOAA Fisheries will consider the recommendation by the New England Council and their decision on the recommendation is not expected to be final until some time in 2016.

Now, about that proposed road through our Preserve…

Lagniappe

In the last few weeks I’ve introduced you to a few scientists and talked about my role helping to give students an avenue to explore, question and pursue learning about things that interest them in a safe, supportive environment.  I’m going to close out the Lagniappe section of my TAS blog by introducing you to “what’s next” in scallop science through a conversation with fellow day-watch science-crew member, and Cornell PhD candidate, Katie Kaplan.

That’s Katie in the hat and sunglasses, avoiding the paparazzi

That’s Katie in the hat and sunglasses, avoiding the paparazzi

Katie is a volunteer on this cruise.  She’s using HabCam data as part of the work towards her PhD and wanted to get a first hand peek at the HabCam in action (I mean, who wouldn’t want to fly over the sea floor and pick fights with crabs and lobsters!), so, she signed up.  Katie’s work fits nicely in today’s blog for several reasons, largely because her work centers on what is happening with the scallops in one of the closed areas I discussed above.

Specifically, Katie is evaluating the impacts of marine protected areas on interactions of sea scallops and other species in benthic (i.e. – “seafloor”) ecosystems.  In particular she is evaluating the relationship between an invasive tunicate species, Didemnum vexillum and scallops and the impact of the closed areas on this relationship. The invasive tunicate has spread in Georges Bank since 2002 and threatens scallop habitat since they compete for the same space (note: with tunicate species being commonly referred to by names like sea “squirts,” “pork,” and “livers,” you might get the impression their “invasion” isn’t perceived as favorable). After a few weeks in my class it should be obvious, but studying interactions among species as they relate to fishery resources is essential to ensuring fish habitat remains viable and fisheries remain productive to meet our needs as consumers.

On a more personal note, Katie grew up just outside of New York City and headed to Grinnell College in Iowa for her undergraduate studies.  After graduation, she taught English in Ecuador and while living there and on Galapagos, decided to pursue a career that combined her interests in the ocean with her wicked good biology skills (whoa, did I just use “wicked” as an adjective?  I’ve been up north too long!). I need to add that while it’s too long a story for the blog, I seem to be having a “Cornell year,” so it is entirely appropriate that I met my new friend Katie on this cruise.

Katie became inspired to study marine science while swimming with sea lions and sea turtles in Galapagos (um, who wouldn’t, Katie!?!).  While there she studied vulnerable fish habitat on the islands — including nursery areas for sharks!  She decided to devote her life to conservation and management of marine life due to concerns of human caused destruction of the environment.  She hopes “to make a positive impact by contributing to conservation based research and helping humans learn to interact with the environment in a less destructive way.”

Kudos, my friend.  I’m so happy we were on watch together, it was so nice of you to distract the paparazzi…

Photoblog:

Nothing really to annotate in this shot, but, you can see the whole screen.

Nothing really to annotate in this shot, but, you can see the whole screen.

Creeeeeeeeeeeeeeepy

Creeeeeeeeeeeeeeepy

Waved whelk, heading to the 01.

Waved whelk, heading to the 01.

HabCam scared a flatfish.  He was slingin' gravel and puttin' a ton of dust in the air.

HabCam scared a flatfish. He was slingin’ gravel and puttin’ a ton of dust in the air.

Nature

Nature

Textures of the sea

Textures of the sea

Not at all like the blue points down here on the coast that will snip at you

Not at all like the blue points down here on the coast that will pinch you in a heartbeat

I saw this hermit crab out of his shell and heard Dumbledore’s voice in my head saying “You cannot help it;” it was only weird when I looked up and realized I was not in Kings Cross Station

I saw this hermit crab out of his shell and heard Dumbledore’s voice in my head saying “You cannot help it;” it was only weird when I looked up and realized I was not in Kings Cross Station

...I was always on the lookout for the Nisshin Maru; never saw it.

…I was always on the lookout for the Nisshin Maru; never saw it.

Students, always clean up your lab!

Students, always clean up your lab!

More nature.

More nature.

Winslow Homer would be so mad if he knew he could've painted this while hanging out with Rachel Carson at Woods Hole.

Winslow Homer would be so mad if he knew he could’ve painted this while hanging out with Rachel Carson at Woods Hole (her:  “I had my first prolonged contact with the sea at Woods Hole. I never tired of watching the swirling currents pour through the hole — that wonderful place of whirlpools and eddies and swiftly racing waters.”)

DSCN0006

So, that’s about it.  I loved my time aboard the R/V Hugh R. Sharp, have made some new friends, and will always treasure the memories made as a 2015 NOAA Teacher at Sea.  Thanks again, NOAA, what a grand adventure…

Airplane Playlist to Texas:  James Taylor (“Carolina”, “Angels of Fenway”), Robert Earl Keen, Jr. (I’m Comin’ Home); Alpha Rev (“Sing Loud”); Keane (“Somewhere Only We Know”); Avett Brothers (“Spanish Pipedream”); Jim & Jesse (“Paradise”); Amos Lee (“Windows Are Rolled Down”); Bobby Darin (“Beyond The Sea”)

Go outside and play.  Class dismissed.

Mr. Hance

Nikki Durkan: Navigating the high seas, June 24, 2015

NOAA Teacher at Sea
Nikki Durkan
Aboard NOAA Ship Oscar Dyson
June 11 – 30, 2015

Mission: Midwater Assessment Conservation Survey
Geographical area of cruise: Gulf of Alaska
Date: Wednesday, June 24, 2015

Weather Data from the Bridge:
Wind speed (knots): 6.5
Sea Temp (deg C): 11.1
Air Temp (deg C):  11.4

Meet:  Ensign Nate Gilman NOAA Corps Officer

Qualifications:  Master of Environmental Studies from Evergreen State College, Certificate in Fisheries Management from Oregon State University, Bachelors in Environmental Studies from Evergreen State College

Hails from:  Olympia, Washington

Photo Credit:  NOAA

Ensign Nate Gilman, Photo Credit: NOAA

What are your main responsibilities?  Nate is the ship Navigation Officer and Junior Officer On Deck. He not only drives the ship and carries out all the responsibilities that come with this job, but is also responsible for maintaining the charts on board, setting waypoints and plotting our course (manually on the charts and on the computer).  If an adjustment to our course is necessary, Nate must work with the scientific party on board to replot the transects.

What do you enjoy most about your job? Driving the ship, of course!  

Do you eat fish? **This is roughly how my conversation with Nate went on the subject of fish consumption: I don’t eat bugs. (He is referring to shrimp and lobster) – I thought I loved shrimp cocktail, now I know that I love cocktail sauce and butter, so celery and bread are just fine.

Aspirations?  Nate hopes to be stationed in Antarctica for his land deployment (NOAA Corps Officers usually spend two years at sea and three on land).  Ultimately, he wants to earn his teaching certificate and would be happy teaching P.E., especially if he can use these scooters, drink good coffee, ski, and surf.

Science and Technology Log

I spend much of my time on the bridge where I can learn more about topics related to geography and specifically navigation. This is also where I have easy access to fresh air, whale, bird, and island viewing, and comedic breaks. A personality quality the NOAA Corps officers all seem to share is a great sense of humor and they are all science nerds at heart!

Our sextant on board NOAA Ship Oscar Dyson

Our sextant on board NOAA Ship Oscar Dyson

Our Executive Officer, LT Carl Rhodes, showed me several pieces of equipment used to navigate and communicate at sea – the sextant, azimuth ring, and Morse code signaling lamp. Because the sextant relies on triangulation using the sun, moon, or stars – none of which we have seen often, the sextant is a beautiful, but not currently used piece of equipment for us on this trip. The majority of our navigation relies on GPS triangulation; however, the officers still need to mark on the charts (their lingo is to “drop a fix on”) our position roughly every 30 minutes just in case we lose GPS connection. Morse code is a universal language still taught in the Navy and NATO (they install infrared lights to avoid detection). Alternatively, on the radio English is King, but many of the captains know English only as a second language. Think you get frustrated on customer service phone calls? The NOAA Corps Officers actually go through simulations in order to prepare them for these types of issues. During one instance, the language barrier could have caused some confusion between LT Carl Rhodes and the ship he was hailing (the man had a thick Indian accent) but both were quite polite to each other, the other captain even expressed thanks for accommodating our maneuvers.  All the Officers attend etiquette classes as part of their training in NOAA Corps and I just read in their handbook that they must be courteous over the radio.

Unimak pass with lots of traffic – We are the green ship surrounded by other boats (black triangles) - we happened to want to fish in this area, but had to change plans.

Unimak pass with lots of traffic – We are the green ship surrounded by other boats (black triangles) – we happened to want to fish in this area, but had to change plans due to traffic.

Shipping with ships:  80% of our shipping continues to be conducted by sea and many of the ships we encounter here are transporting goods using the great circle routes. These routes are the shortest distance from one point on the earth to another, since the Earth is a spinning sphere, the shortest routes curve north or south toward the poles.  Look at your flight plan the next time you fly and you will understand why a trip from Seattle to Beijing involves a flight near Alaska. Airplanes and ships use great circle routes often and Unimak pass is a heavily trafficked course; however, ships also adjust their plans drastically to avoid foul weather – the risk to the cargo is calculated and often they decide to take alternative paths.

Look at a chart of the Aleutian Islands and you will quickly gain insight into the history of the area. On one chart, you will find islands with names such as Big Koniuji, Paul, Egg, and Chiachi, near Ivanof Bay and Kupreanof Peninsula. The Japanese and Russian influence is quite evident.  NOAA has other ships dedicated to hydrographic (seafloor mapping) surveys. The charts are updated and maintained by NOAA; however, in many cases, the areas in which we are traveling have not been surveyed since the early 1900s. Each chart is divided into sections that indicate when the survey was last completed:

  • A   1990-2009
  • B3 1940 – 1969
  • B4 1900 – 1939

An easy way to remember: When was the area last surveyed? B4 time. I told you they like their puns on the Bridge!

Flathead Sole - How these guys navigate the seafloor is beyond me!

Flathead Sole – How these guys navigate the seafloor is beyond me!

Personal Log

Maintaining fitness while at sea can be a challenge, and I am thankful the ship has a spin bike because trying to do jumping jacks while the boat is rocking all over is quite difficult, I am probably getting a better ab workout from laughing at myself.  Pushups and situps are an unpredictable experience – I either feel like superwoman or a weakling, depending on the tilt of the ship which erratically changes every few seconds.  Ultimately, I am finding creative ways to get my heart pumping – I do my best thinking while exercising!

One of my most valuable take-aways from this experience is my broadened perspective on those who choose to serve our country in the military and the varied personalities they can have.  Most of the individuals on board the ship year round have experience in the military and I have now met individuals from NOAA Corps, Coast Guard, Airforce, Army, Marines, and the U.S. Publice Health Service.  I am grateful to have the opportunity to meet them!

Vinny (my co-TAS) also served in the military.

Vinny (my co-TAS) also served in the military.

Did you know?  Saildrones are likely the next big step for conducting research at sea.  These 19 foot crafts are autonomous and have already proved capable of sailing from California to Hawaii.  Check out this article to learn more:  The Drone That Will Sail Itself Around The World