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GPS-Prot: HIV-host browser
Principal Investigators
Sister Centers
Collaborative Development
NIH AIDS-Related Structural Biology Program

Publication Highlights:
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HIV-1 Tat recruits transcription elongation factors dispersed along a flexible AFF4 scaffold. PNAS epub ahead of print (Dec. 18, 2012)

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Inhibition of the NEDD8 cascade containing UBE2F restores restriction of HIV-1by APOBEC3G. PLoS Pathogens epub Dec. 27, 2012

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Global landscape of HIV-human protein complexes, Nature, 481, p. 365-70 (2012)

Featured in Nat. Rev. Microb., Nature & Biotechniques

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Vif hijacks CBFbeta to degrade APOBEC3G and promote HIV-1 infection, Nature, 481, p. 371-5 (2012)

Featured in Nat. Rev. Microb. & Biotechniques

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Human polymerase-associated factor complex (PAFc) connects the super elongation complex (SEC) to RNA polymerase II on chromatin, PNAS, 108, p. E636-E645 (2011).

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GPS-Prot: A visualization program for integrating host-pathogen protein and genetic interaction data.
BMC Bioinformatics, 12:298 (2011)

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Welcome to the HARC Center

New! Collaborative Opportunity Fund
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Research Highlight:
Interplay between CBF-β, Vif and RUNX

CBF-β stabilizes Vif to counteract APOBEC3 at the expense of RUNX1 target gene expression (2013).
Kim et al., Mol. Cell, in press.

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HARC Center Mission:

The HARC Center is an interdisciplinary research center aimed at creating a comprehensive structural picture of interactions between HIV viral proteins and intracellular host molecules at early stages in the viral lifecycle. High-resolution structures of such complexes offer the potential for novel targeted drug design strategies in the treatment of AIDS.

Throughout the HIV life cycle, viral-host complexes play an integral role in the biology of the virus. The HARC Center focuses on a subset of complexes involved in hijacking host machinery for transcription, export and trafficking of nucleic acids, and degradation and evasion of anti-viral restriction factors. Our major projects involve HIV accessory and regulatory proteins (e.g. Rev, Tat and Vif) that interact with the host machinery and viral nucleic acids to affect key functions. We are also utilizing a proteomics approach to generate a comprehensive map of high quality, validated interactions for these proteins and others in the HIV genome.

The Center is comprised of researchers from ten different laboratories at UCSF and Berkeley, and is one of three Specialized Centers for Determination of Structures and HIV-host Complexes funded by the NIH AIDS-Related Structural Biology Program at the National Institute of General Medical Sciences (NIGMS). Members of the HARC Center provide expertise within a comprehensive range of biochemical, molecular biological and structural methods, including mass spectroscopy, x-ray crystallography, NMR and cryo-electron microscopy.

In conjunction with its research activities, the Center makes new methodologies, tools and databases available to the research community at large, and is active in creating new collaborations with outside investigators.

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