Documents

Publications

Peer-reviewed publications about the FRC or by FRC investigators. Researchers, to include your publications on this list, contact Dave Watson (watsondb@ornl.gov).


  • Search by Author (such as Watson)
    		•
  • Search by Title Keyword (such as uranium)
    		•



About the Oak Ridge Field Research Center


Bioreduction and immobilization of uranium in situ: a case study at a USA Department of Energy radioactive waste site, Oak Ridge, Tennessee. (In Chinese).    
Wu, W-M.,J. Carley, D. Watson, B. Gu, S. Brooks, S. Kelly, K. Kemner, J.D. Van Nostrand, L. Wu, M. Xu, J. Zhou, J. Luo, E. Cardenas, C. Hwang, M.W. Fields, T.L. Marsh, J.M. Tiedje, S. J. Green, J.E. Kostka, P.K. Kitanidis, P.M. Jardine, and C.S. Criddle    
Acta Scientiae Circumstaniae (in Chinese) 31:3, 209-318  
2011    

Monitoring microbial activity with GeoChip. In: microbial metal and metalloid metabolism: advances and applications..    
Van Nostrand, J.D., S. Kang, Y. Deng, Y. Liang, Z. He, and J. Zhou    
American Society for Microbiology Press :,   
2011    

Application of functional gene arrays (GeoChips) in monitoring carbon cycling. In Biological Carbon Pump (booklet)..    
Van Nostrand, J.D. and J. Zhou    
Biological Carbon Pump (booklet). AAAS. :, 64-65  
2011    

Massively-parallel rRNA gene sequencing exacerbates the potential for biased community diversity comparisons due to variable library sizes..    
Ghiring, T.M., S.J. Green, and C.W. Schadt    
Environmental Microbiology :,   
2011    

Reduction of Uranium(VI) by Soluble Iron(II) Conforms with Thermodynamic Predictions.    
Du, X., B. Boonchayaanant, W.-M. Wu, S. Fendorf, J. Bargar, and C. Criddle    
Environmental Science & Technology 45:11, 4718-4725  
2011    

A Spreadsheet Program for Two-Well Tracer Test Data Analysis.    
Tang, G., D.B. Watson, J.C. Parker, and S.C. Brooks    
Ground Water :,   
2011    

Estimating reaction rate coefficients within a travel-time modeling framework..    
Gong, R., C. Lu, W.-M. Wu, H. Cheng, B. Gu, D. Watson, P.M. Jardine, S.C. Brooks, C.S. Criddle, P.K. Kitanidis, and J. Luo    
Ground Water :,   
2011    

Modeling uranium transport in acidic contaminated groundwater with base addition.    
Zhang, F., W. Luo, J. Parker, S. Brooks, D.B. Watson, P.M. Jardine, and B. Gu    
Journal of Hazardous Materials 190:1-3, 863-868  
2011    

Dynamics of Microbial Community Composition and Function during In Situ Bioremediation of a Uranium-Contaminated Aquifer.    
Van Nostrand, J.D., L. Wu, W.-M. Wu, T.J. Gentry, Z. Huang, Y. Deng, J. Carley, S. Carroll, Z. He, B. Gu, J. Luo, C.S. Criddle, D.B. Watson, P.M. Jardine, T.L. Marsh, J.M. Tiedje, T.C. Hazen and J. Zhou    
The International Society of Microbial Ecology 77:11,   
2011    

Coupled modeling of hydrogeochemical and electrical resistivity data for exploring the impact of recharge on subsurface contamination..    
Kowalsky, M.B., E. Gasperikova, S. Finsterle, D. Watson, G. Baker, and S. Hubbard    
Water Resources Research 47:, 22P  
2011    

Significant Association between Sulfate-Reducing Bacteria and Uranium-Reducing Microbial communities as revealed by a combined Massively Parrallel Sequencing-Indicator Species approach..    
Cardenas, E., W.-M. Wu, M.B. Leigh, J. Carley, S. Carroll, T. Gentry, J. Luo, D. Watson, B. Gu, M. Ginder-Vogel, P.K. Kitanidis, P.M. Jardine, J. Zhou, C.S. Criddle, T.L. Marsh, and J.M. Tiedje    
American Society for Microbiology 74:12, 3718-3729  
2010    

Denitrifying bacteria isolated from terrestrial subsurface sediments exposed to mixed-waste contamination..    
Green, S.J., O. Prakash, T.M. Gihring, D.M. Akob, P. Jasrotia, P.M. Jardine, D.B. Watson, S.D. Brown, A.V. Palumbo, and J.E. Kostka    
Applied and Environmental Microbiology 76:10, 3244-3255  
2010    

Dramatic impact of anthropogenic contamination on bacterial community structure in terrestrial subsurface sediments..    
Green, S.J., E. Cardenas, D. Hubbard, D.M. Akob, J.M. Tiedje, D.B. Watson, P.M. Jardine, S.C. Brooks, and J.E. Kostka    
Applied and Environmental Microbiology 76:10, 3244-3254  
2010    

Significant Association between Sulfate-Reducing Bacteria and Uranium-Reducing Microbial Communities as Revealed by a Combined Massively Parallel Sequencing-Indicator Species Approach.    
Cardenas, E., W-M. Wu, M.B. Leigh, J. Carley, S. Carroll, T. Gentry, J. Luo, D.B. Watson, B. Gu, M. Ginder-Vogel, P.K. Kitanidis, P.M. Jardine, J. Zhou, C. Criddle, T. Marsh, and J.M. Tiedje    
Applied and Environmental Microbiology 76:20, 6778-6786  
2010    

Simulation of groundwater composition change due to deposition of uranium minerals in dolomite gravel fill..    
Zhang, F., J.C. Parker, D.B. Watson, D. Phillips, and P.M. Jardine.    
ASCE Geotechnics (GSP 204) - Proceedings of sessions of GeoShangahai 2010 International Conference. Shanghai, China, June 3-5 (2010). Pp. 181-187, doi 10.1061/41105(378)25 :, 181-187  
2010    

Application of A Hybrid MPI/OpenMP Approach for Parallel Groundwater Model Calibration on Multi-Core Computers..    
Tang, G., E.F. D'Azevedo, F. Zhang, J.C. Parker, D.B. Watson, and P.M. Jardine    
Computers & Geosciences :,   
2010    

Metagenomic analysis reveals a marked divergence in the structure of belowground microbial communities at elevated CO2..    
He, Z., M. Xu, Y. Deng, S. Kang, L. Kellogg, L. Wu, J.D. Van Nostrand, S.E. Hobbie, P.B. Reich, and J. Zhou    
Ecology Letters 13:5, 564-575  
2010    

Effects of nitrate on the stability of uranium in a bioreduced region of the subsurface..    
Wu, W., J. Carley, S. Green, J. Luo, S. Kelly, J. Van Nostrand, K. Lowe, T. Mehlhorn, S. Carroll, B. Boonchayaanant, F. Loeffler, D. Watson, J. Zhou, P. Kitanidis, J. Kostka, P. Jardine, and C. Criddle    
Environmental Science & Technology 44:13, 5104-5111  
2010    

Hydrogel-encapsulated soil: a tool to measure contaminant attenuation in situ..    
Spalding, B., S.C. Brooks, and D.B. Watson    
Environmental Science & Technology 44:8, 3047-3051  
2010    

Characterization of Co(III) EDTA-reducing bacteria in metal- and radionuclide-contaminated groundwater..    
Gao, W., T.J. Gentry, T.L. Mehlhorn, S.L. Carroll, P.M. Jardine, and J. Zhou    
Geomicrobiology Journal 27:1, 93-100  
2010    

Microarray analysis of environmental samples. In: environmental microbiology: current technology and water applications..    
Van Nostrand, J.D., Z. He, and J. Zhou    
Horizon Scientific :,   
2010    

Radionuclide processing, disposal practices, plume migration, and remediation on the Oak Ridge Reservation..    
Jardine, P., S.C. Brooks, and D.B. Watson    
John Wiley and Sons, Somerset, N.J., online :June 15, 2010,   
2010    

Estimating kinetic mass transfer by resting-period measurements in flow-interruption tracer tests..    
Gong, R., C. Lu, W.-M. Wu, H. Cheng, B. Gu, D.B. Watson, C.S. Criddle, P.K. Kitanidis, S.C. Brooks, P.M. Jardine, and J. Luo    
Journal of Contaminant Hydrology 117:1-4, 37-45  
2010    

Innovative mathematical modeling in environmental remediation..    
Yeh, G.T., J.P. Gwo, M.D. Siegel, M.H. Li, Y.L. Fang, F. Zhang, W.S. Luo, and S.B. Yabusaki    
Journal of Environmental Radioactivity :,   
2010    

Kinetic analysis and modeling of oleate and ethanol stimulated uranium (VI) bio-reduction in contaminated sediments under sulfate reduction conditions..    
Zhang, F., W.-M. Wu, J.C. Parker, T. Mehlhorn, S.D. Kelly, K.M. Kemner, G. Zhang, C. Schadt, S.C. Brooks, C.S. Criddle, D.B. Watson, and P.M. Jardine    
Journal of Hazardous Materials 183:1-3, 482-489  
2010    

Prediction of uranium and technetium sorption during titration of contaminated acidic groundwater..    
Zhang, F., J.C. Parker, S.C. Brooks, D.B. Watson, P.M. Jardine, and B.GU.    
Journal of Hazardous Materials 178:1-3, 42-48  
2010    

Applying GeoChip analysis to disparate microbial communities..    
Zhou, J., Z. He, J.D. Van Nostrand, L. Wu, and Y. Deng    
Microbe 5:, 60-65  
2010    

Analysis of microbial communities by functional gene arrays. In: L. Barton, M. Mandl and A. Loy (eds) Geomicrobiology: Molecular and Environmental Perspective..    
Van Nostrand, J.D., Z. He, and J. Zhou    
Springer :,   
2010    

GeoChip: a high throughput genomic tool for linking community structure to functions. In: K.N. Timmis (ed) handbook of hydrocarbon and lipid microbiology, vol 3, consequences of microbial interactions with hydrocarbons, oils, and lipids..    
Van Nostrand, J.D., Y. Liang, Z. He, G. Li, and J. Zhou    
Springer :, 2677-2685  
2010    

GeoChips for analysis of microbial functional communities. In: J.R. van der Meer handbook of hydrocarbon and lipid microbiology, vol. 4, experimental protocols and appendices..    
Van Nostrand, J.D., L. Wu, Z. He, and J. Zhou    
Springer :, 4039-4050  
2010    

GeoChip 3.0 as a high-throughput tool for analyzing microbial community composition, structure and functional activity..    
He, Z., Y. Deng, J.D. Van Nostrand, Q. Tu, M. Xu, C.L. Hemme, X. Li, L. Wu, T.J. Gentry, Y. Yin, J. Liebich, T.C. Hazen, and J. Zhou    
The International Society of Microbial Ecology 4:9, 1167-1179  
2010    

Metagenomic insights into evolution of a heavy metal-contaminated groundwater microbial community..    
Hemme, C.L., Y. Deng, T.J. Gentry, M.W. Fields, L. Wu, Z. Fang, S. Barua, K. Barry, S. Green-Tringe, D.B. Watson, Z. He, T.C. Hazen, J.M. Tiedje, E.M. Rubin, and J.-Z. Zhou    
The International Society of Microbial Ecology 4:5, 660-672  
2010    

Responses of microbial community functional structures to pilot-scale uranium in situ bioremediation..    
Xu, M., W.-M. Wu, L. Wu, Z. He, J.D. Van Nostrand, Y. Deng, J. Luo, J. Carley, M. Ginder-Vogel, T.J. Gentry, B. Gu, D. Watson, P.M. Jardine, T.L. Marsh, J.M. Tiedje, J. Hazen, C.S. Criddle, and J. Zhou    
The International Society of Microbial Ecology 4:8, 1060-1070  
2010    

Stochastic estimation of aquifer geometry using seismic refraction data with borehole depth constraints..    
Chen, J., S.S. Hubbard, D. Gaines, V. Korneev, G. Baker, and D. Watson    
Water Resources Research :,   
2010    

Microorganisms and processes linked to uranium reduction and immobilization. Microbial metal and metalloid metabolism: advances and applications..    
Kostka, J.E. and S.J. Green    
American Society for Microbiology Press :,   
2009    

Denitrifying bacteria isolated from terrestrial subsurface sediments exposed to mixed-waste contamination..    
Green, S.J., O. Prakash, T.M. Gihring, D.M. Akob, P. Jasrotia, P.M. Jardine, D.B. Watson, and J.E. Kostka    
Applied and Environmental Microbiology 76:10, 3244-3254  
2009    

Diversity and distribution of Anaeromyxobacter strains in a uranium-contaminated subsurface environment with nonuniform groundwater flow..    
Thomas, S.H., E. Padilla-Crespo, P.M. Jardine, R.A. Sanford, and F.E. Loffler    
Applied and Environmental Microbiology 75:11, 3679-3687  
2009    

Can microbially generated hydrogen sulfide account for the rates of U(VI) reduction by a sulfate reducing bacterium?.    
Boonchayaanant, B., B. Gu, M.E. Ortiz, and C.S. Criddle    
Biodegradation 21:1, 81-95  
2009    

Numerical modeling of coupled fluid flow and thermal and reactive biogeochemical transport in porous and fractured media..    
Yeh, G.T., Y. Fang, F. Zhang, J. Sun, Y. Li, M.H. Li, and M.D. Siegel    
Computational Geosciences 14:1, 149-170  
2009    

CXTFIT/Excel - A modular adaptable code for parameter estimation, sensitivity analysis and uncertainty analysis..    
Tang, G., M.A. Mayes, J.C. Parker, and P.M. Jardine    
Computers & Geosciences 36:9, 1200-1209  
2009    

GeoChip-based analysis of functional microbial communities in a bioreduced uranium-contaminated aquifer during reoxidation by oxygen..    
Van Nostrand, J.D., W.-M. Wu, L. Wu, Y. Deng, J.C. Carley, S. Carroll, Z. He, B. Gu, J. Luo, C.S. Criddle, D.B. Watson, P.M. Jardine, J.M. Tiedje, T.C. Hazen, and J. Zhou    
Environmental Microbiology 11:10, 2611-2626  
2009    

Dissolution and mobilization of uranium in a reduced sediment by natural humic substances under anerobic conditions..    
Luo, W. and B. Gu    
Environmental Science & Technology 43:1, 152-156  
2009    

Functional gene array-based analysis of microbial community structure in groundwaters with a gradient of contaminant levels..    
Waldron, P.J., L.-Y. Wu, J.D. Van Nostrand, C.W. Schadt, D.B. Watson, P.M. Jardine, A.V. Palumbo, T.C. Hazen, and J.-Z. Zhou    
Environmental Science & Technology 43:10, 3529-3534  
2009    

Impact of biostimulated redox processes on metal dynamics in an iron-rich creek soil of a former uranium mining area..    
Burkhardt, E.-M., D.M. Akob, S. Bischoff, J. Sitte, J.E. Kostka, D. Banerjee, A.C. Scheinost, and K. Kuesel    
Environmental Science & Technology 44:1, 177-183  
2009    

Sequestering uranium and technetium through co-precipitation with aluminum in a contaminated acidic environment..    
Luo, W., S.D. Kelly, K.M. Kemner, D. Watson, J. Zhou, P.M. Jardine, and B. Gu    
Environmental Science & Technology 43:18, 7516-7522  
2009    

Treatment of nitric acid-, U(VI)-, and TC (VII)-contaminated groundwater in intermediate-scale physical models of an in situ biobarrier..    
Michaelson, M.M., A.D. Peacock, A.N. Smithgal, D.C. White, A.M. Spain, Y. Sanchez-Rosario, L.R. Krumholz, S.D. Kelly, K.M. Kemner, J. McKinley, S.M. Heald, M.A. Bogle, D.B. Watson, and J.D. Istok    
Environmental Science & Technology 43:6, 1952-1961  
2009    

Uranium transformations in static microcosms..    
Kelly, S., W-M. Wu, F. Yang, C. Criddle, T. Marsh, E. O'Loughlin, B. Ravel, D. Watson, P. Jardine, and K. Kemner    
Environmental Science & Technology 44:1, 236-242  
2009    

Uranium transformations in static microcosms..    
Kelly, S.D., W.-M. Wu, F. Yang, C.S. Criddle, T.L. Marsh, E.J. O'Lughlin, B. Ravel, D. Watson, P.M. Jardine, and K.M. Kemner    
Environmental Science & Technology 44:1, 236-242  
2009    

Metabolically active bacteria mediating electron flow during bioremediation of uranium-contaminated subsurface sediments..    
Akob, D.M., M.S. Humphrys, S.J. Green, L. Kerkhof, K.-J. Chin, K. Kusel, D.B. Watson, A.V. Palumbo, and J.E. Kostka.    
Geochimica et Cosmochimica Acta :,   
2009    

Subsurface microbial community structure correlates with uranium redox phases during in situ field manipulation in a contaminated aquifer..    
Kostka, J.E., S. Green, W.M. Wu, C. Criddle, D.B. Watson, and P. Jardine    
Geochimica et Cosmochimica Acta 73:13, A688  
2009    

Geobacter daltonii sp. nov., an iron(III)- and uranium(VI)-reducing bacterium isolated from the shallow subsurface exposed to mixed heavy metal and hydrocarbon contamination..    
Prakash, O., T.M. Gihring, D.D. Dalton, K.-J. Chin, S.J. Green, D.M. Akob, G. Wanger, and J.E. Kostka    
International Journal of Systematic and Evolutionary Microbiology 60:3, 546-553  
2009    

Improving parameter estimation for column experiments by multi-model evaluation and comparison..    
Tang, G., M.A. Mayes, J.C. Parker, X.L. Yin, D.B. Watson, and P.M. Jardine    
Journal of Contaminant Hydrology 376:3-4, 567-578  
2009    

Donor-dependent extent of uranium reduction for bioremediation of contaminated sediment microcosms..    
Madden, A.S., A.V. Palumbo, B. Ravel, T.A. Vishnivetskaya, T.J. Phelps, C.W. Schadt and C.C. Brandt    
Journal of Environmental Quality 38:1, 53-60  
2009    

Detection and characterization of uncultivated microorganisms using microarrays..    
Gentry, T.J., Z. He, and J. Zhou    
Microbiology Monographs 10:, 35-38  
2009    

Influence of sedimentary bedding on reactive transport parameters under unsaturated conditions..    
Mayes, M.A., G. Tang, P.M. Jardine, L.D. McKay, X.L. Yin, M.N. Pace, J.C. Parker, F. Zhang, T.L. Melhorn, and R. Dansby-Sparks    
Soil Science Society of America 73:6, 1938-1946  
2009    

Bacterial community succession during in situ uranium bioremediation: spatial similarities along controlled flow paths..    
Hwang, C., W. Wu, T.J. Gentry, J. Carley, G.A. Corbin, S.L. Carroll, D.B. Watson, P.M. Jardine, J. Zhou, C.S. Criddle, and M.W. Fields    
The International Society for Microbial Ecology 3:1, 47-64  
2009    

Comparison of approaches to calibrate a surface complexation model for U(VI) sorption to weathered saprolite..    
Zhang, F., J.C. Parker, S.C. Brooks, Y.-J. Kim, G. Tang, P.M. Jardine, and D.B. Watson    
Transport in Porous Media 78:2, 185-197  
2009    

Uranium reduction and resistance to reoxidation under iron-reducing and sulfate-reducing conditions..    
Boonchayaanant, B., D. Nayak, X. Du, and C.S. Criddle    
Water Research 43:18, 4652-4664  
2009    

Structure and function of microbial communities controlling the fate and transformation of U(VI) in radionuclide contaminated subsurface sediments..    
Akob, D.M.    
(PhD dissertation, Florida State University) :,   
2008    

Influence of coupled processes on contaminant fate and transport in subsurface environments..    
Jardine, P.M.    
Advances in Agronomy 99:, 1-99  
2008    

Empirical evaluation of a new method for calculating signal-to-noise ratio for microarray data analysis..    
He, Z. and J.-Z. Zhou    
Applied and Environmental Microbiology 74:10, 2957-2966  
2008    

Functional diversity and electron donor dependence of microbial populations capable of U(VI) reduction in radionuclide contaminated subsurface sediments..    
Akob, D.M., H.J. Mills, T.M. Gihring, L. Kerkhof, J.W. Stucki, A.S. Anastacio, K.-J. Chin, K. Kusel, A.V. Palumbo, D.B. Watson, and J.E. Kostka    
Applied and Environmental Microbiology 74:10, 3159-3170  
2008    

Microarray-based characterization of microbial community functional structure and heterogeneity in marine sediments from the Gulf of Mexico..    
Wu, L., L. Kellogg, A.H. Devol, A.V. Palumbo, J.M. Tiedje, and J. Zhou    
Applied and Environmental Microbiology 74:14, 4516-4529  
2008    

Microbial communities in contaminated sediments, associated with bioremediation of uranium to submicromolar levels..    
Cardenas, E., W.-M. Wu, M.B. Leigh, J. Carley, S. Carroll, T. Gentry, J. Luo, D. Watson, B. Gu, M. Ginder-Vogel, P.K. Kitanidis, P.M. Jardine, J. Zhou, C.S. Criddle, T.L. Marsh, and J.M. Tiedje    
Applied and Environmental Microbiology 74:12, 3718-3729  
2008    

Single Cell genomics in accessing uncultivated microorganisms..    
Keller, M., C.W. Schadt, and A.V. Palumbo    
ASM Press :,   
2008    

Assessment of data processing to improve reliability of microarray experiments using genomic DNA reference..    
Yang, Y.F., M. Zhu, L. Wu, and J. Zhou    
BioMed Central Genomics 9:2, S5  
2008    

Characterization of the Shewanella oneidensis fur gene: roles in iron and acid tolerance response..    
Yang, Y., D.P. Harris, F. Luo, L. Wu, A.B. Parsons, A.V. Palumbo, and J.-Z. Zhou    
BioMed Central Genomics 9:1, S11  
2008    

Design and analysis of mismatch probes for long oligonucleotide microarrays..    
Deng, Y., Z. He, J.D. Van Nostrand, and J.-Z. Zhou    
BioMed Central Genomics 9:, 491  
2008    

Growth and cometabolic reduction kinetics of a uranium- and sulfate-reducing Desulfovibrio/Clostridia mixed culture: temperature effects..    
Boonchayaanant, B., P.K. Kitanidis, and C.S. Criddle    
Biotechnology and Bioengineering 99:5, 1107-1119  
2008    

Effects of gamma-sterilization on the physico-checmical properties of natural sediments..    
Bank, T.L., R.K. Kukkadapu, A.S. Madden, M.A. Ginder-Vogel, M.E. Baldwin, and P.M. Jardine    
Chemical Geology 251:1-4, 1-7  
2008    

Biogeochemical processess in ethanol stimulated uranium-contaminated subsurface sediments..    
Mohanty, S.R., B. Kollah, D.B. Hedrick, A. Peacock, R.K. Kukkadapu, and E.E. Roden.    
Environmental Science & Technology 42:12, 4384-4390  
2008    

Deposition of uranium precipitates in dolomitic gravel fill..    
Phillips, D.H., D.B. Watson, S.D. Kelly, B. Ravel, and K.M. Kemner    
Environmental Science & Technology 42:19, 7104-7110  
2008    

Geochemical modeling and partitioning of trace metals and radionuclides during titration of contminated acidic sediments..    
Zhang, F., W. Luo, J.C. Parker, B.P. Spalding, S.C. Brooks, D.B. Watson, P.M. Jardine, and B. Gu    
Environmental Science & Technology 42:21, 8007-8013  
2008    

Influence of nitrate on microbial reduction of pertechnetate..    
Li, X. and L.R. Krumholz    
Environmental Science & Technology 42:6, 1910-1915  
2008    

Passive sampling and analyses of common dissolved fixed gases in groundwater..    
Spalding, B.P. and D.B. Watson    
Environmental Science & Technology 42:10, 3766-3772  
2008    

Speciation of uranium in sediments before and after in situ bioreduction..    
Kelly, S., K. Kemner, J. Carley, C. Criddle, P.M. Jardine, T.L. Marsh, D. Phillips, D. Watson, and W.-M. Wu    
Environmental Science & Technology 42:5, 1558-1564  
2008    

Acclimation of subsurface microbial communities to mercury..    
Lipthay, J.R., L.D. Rasmussen, G. Oregaard, K. Simonsen, M.I. Bahl, N. Kroer and S. J. Sorensen    
FEMS Microbiology Ecology 65:1, 145-155  
2008    

A reactive transport model to simulate uranium immobilization through pH manipulation..    
Zhang, F., W. Luo, D.B. Watson, J.C. Parker, B. Gu, B.P. Spalding, and P.M. Jardine    
Geochimica et Cosmochimica Acta 72:12, A1080  
2008    

Estimating first-order reaction rate coefficient for transport with nonequilibrium linear mass transfer in heterogeneous media..    
Luo, J., W.-M. Wu, J. Carley, M.N. Fienen, H. Cheng, D. Watson, C.S. Criddle, P.M. Jardine, and P.K. Kitanidis    
Journal of Contaminant Hydrology 98:1-2, 50-60  
2008    

Microarray-based whole-genome hybridization as a tool for determining procaryotic species relatedness..    
Wu, L., X. Liu, M.W. Fields, D.K. Thompson, C.E. Bagwell, J.M. Tiedje, T.C. Hazen, and J.-Z. Zhou    
The International Society of Microbial Ecology 2:6, 642-655  
2008    

Development and application of functional gene arrays for microbial community analysis..    
He, Z., J.D. Van Nostrand, L. Wu, and J.-Z. Zhou    
Transactions of Nonferrous Metals Society of China 18:6, 1319-1327  
2008    

An adaptive local grid refinement and peak/valley capture algorithm to solve nonlinear transport problems with moving sharp-fronts..    
Zhang, F., L. Jiang, G.T. Yeh, and J.C. Parker    
Transport in Porous Media 72:1, 53-69  
2008    

Uranium removal from contaminated groundwater by synthetic resins..    
Phillips, D.H., B. Gu, D.B. Watson, and C.S. Parmele    
Water Research 42:1-2, 260-268  
2008    

Identification and Isolation of a Castellaniella Species Important during Biostimulation of an Acidic Nitrate- and Uranium-contaminated Aquifer.    
Spain, A.M., A.D. Peacock, J.D. Istok, M.S. lshahed, F.Z. Najar, B.A. Roe, D.C. White, and L.R. Krumholz    
Applied and Evironmental Microbiology 73:15, 4892-4904  
2007    

Influence of Bicarbonate, Sulfate, and Electron Donors on Biological Reduction of Uranium and Microbial Community Composition.    
Luo, W., W.-M. Wu, T. Yan, C.S. Criddle, P.M. Jardine, Z. Zhou, and B. Gu    
Applied Microbiology Biotechnology 77:, 713-721  
2007    

In situ Bioreduction of Uranium (VI) to Submicromolar Levels and Reoxidation by Dissolved Oxygen.    
Wu, W.Carley, Luo, Ginder-Vogel, Cardenas, Leigh, Hwang, Kelly, Ruan, L. Wu, Van Nostrand, Gentry, Lowe, Mehlhorn, Carroll, Luo, Fields, Gu, Watson, Kemner, Marsh, Tiedje, Zhou, Fendorf, Kitanidis, Jardine, Criddle    
Environmental Science & Technology 41:16, 5716-5723  
2007    

Inhibition of a U(VI)- and Sulfate-reducing Consortia by U(VI).    
Nyman, J.L., H. Wu, M.E. Gentile, P.K. Kitanidis, and C.S. Criddle    
Environmental Science & Technology 41:18, 6528-6533  
2007    

Uranium Deposition in a Weathered Fractured Saprolite/Shale.    
Phillips, D.H.,D.B. Watson, and Y. Roh    
Environmental Science & Technology 41:22, 7653-7660  
2007    

Metabolically Active Microbial Communities in Uranium-contaminated Subsurface Sediments.    
Akob, D.M., H.J. Mills, and J.E. Kostka    
FEMS Microbiology Ecology 59:, 95-107  
2007    

High Diversity of Bacterial Mercuric Reductase Genes from Surface and Sub-surface Floodplain Soil (Oak Ridge, USA).    
Oregaard, G. and S.J. Sorensen    
International Society for Microbial Ecology 1:, 453-467  
2007    

A Reaction-based Paradigm to Model Reactive Chemical Transport in Groundwater with General Kinetic and Equilibrium Reactions.    
Zhang, F., G.T. Yeh, J.C. Parker, S.C. Brooks, M.N. Pace, Y.J. Kim, P.M. Jardine, and D.B. Watson    
Journal of Contaminant Hydrology 92:1-2, 10-32  
2007    

Quantifying the physical and chemical mass transfer processes for the fate and transport of Co(II)EDTA in a partially-weathered limestone-shale saprolite.    
Gwo, J.P., M.A. Mayes, and P.M. Jardine    
Journal of Contaminant Hydrology 90:4-Mar, 184-202  
2007    

A catalytic beacon sensor for uranium with parts-per-trillion sensitivity and millionfold selectivity.    
Liu, J.W., A.K. Brown, X.L. Meng, D.M. Cropek, J.D. Istok, D.B. Watson, and Y. Lu    
Proceedings of the National Academy of Sciences of the United States of America 104:7, 2056-2061  
2007    

GeoChip: A Comprehensive Microarray for Investigating Biogeochemical, Ecological and Environmental Processes.    
He, Z.,T.J. Gentry, C.W. Schadt, L. Wu, J. Liebich, S.C. Chong, Z. Huang, W. Wu, B. Gu, P. Jardine, C. Criddle, and J. Zhou    
The ISME Journal 1:, 67-77  
2007    

Environmental whole-genome amplification to access microbial populations in contaminated sediments.    
Abutencia, C.B., D.L. Wyborski, J.A. Garcia, M. Podar, W.Q. Chen, S.H. Chang, H.W. Chang, D. Watson, E.L. Brodie, T.C. Hazen, and M. Keller    
Applied and Environmental Microbiology 72:5, 3291-3301  
2006    

Horizontal gene transfer of P-IB-type ATPases among bacteria isolated from radionuclide- and metal-contaminated subsurface soils.    
Martinez, R.J., Y.L. Wang, M.A. Raimondo, J.M. Coombs, T. Barkay, and P.A. Sobecky    
Applied and Environmental Microbiology 72:5, 3111-3118  
2006    

Microarray-based analysis of subnanogram quantities of microbial community DNAs by using whole-community genome amplification.    
Wu, L., X. Liu, C.W. Schadt, and J. Zhou    
Applied and Environmental Microbiology 72:7, 4931-4941  
2006    

Uranium(VI) reduction by Anaeromyxobacter dehalogenans strain 2CP-C.    
Q. Wu, R.A. Sanford, and F.E. Loffler    
Applied and Environmental Microbiology 72:5, 3608-3614  
2006    

Heterogeneous response to biostimulation for U(VI) reduction in replicated sediment microcosms.    
Nyman, J.L., T.L. Marsh, M.A. Ginder-Vogel, M. Gentile, S. Fendorf, and C. Criddle    
Biodegradation 17:4, 303-316  
2006    

Electron Microbeam Investigation of Uranium-Contaminated Soils from Oak Ridge, TN, USA.    
Stubbs, J.E., D.C. Elbert, D.R. Veblen, and C. Zhu    
Environmental Science & Technology 40:7, 2108-2113  
2006    

Measurement of dissolved H2, O2, and CO2 in groundwater using passive samplers for gas chromatographic analyses.    
Spalding, B.P. and D.B. Watson    
Environmental Science & Technology 40:24, 7861-7867  
2006    

Pilot-scale in situ bioremedation of uranium in a highly contaminated aquifer. 2. Reduction of U(VI) and geochemical control of U(VI) bioavailability.    
Wu, W.-M., J. Carley, T. Gentry, M.A.Ginder-Vogel, M. Fienen,T. Mehlhorn, H. Yan,S. Caroll, M.N. Pace,J. Nyman,J. Luo, M.E. Gentile, M.W. Fields, R.F. Hickey, B.H. Gu,D. Watson, O.A. Cirpka, J Z. Zhou,S. Fendorf, P.K. Kitanidis, P.M. Jardine, C.S. Criddle    
Environmental Science & Technology 40:12, 3986-3995  
2006    

Pilot-scale in situ bioremediation of uranium in a highly contaminated aquifer. 1. Conditioning of a treatment zone.    
Wu, W.-M., J. Carley, M. Fienen, T. Mehlhorn, K. Lowe, J. Nyman, J. Luo, M. E. Gentile, R. Rajan, D. Wagner, R.F. Hickey, B.H. Gu, D. Watson, O.A. Cirpka, P.K. Kitanidis, P.M. Jardine, and C.S. Criddle    
Environmental Science & Technology 40:12, 3978-3985  
2006    

Uranium and technetium bio-immobilization in intermediate-scale physical models of an in situ bio-barrier.    
Michalsen, M.M., B.A. Goodman, S.D. Kelly, K.M. Kemner, J.P. McKinley, J.W. Stucki, and J.D. Istok    
Environmental Science & Technology 40:22, 7048-7053  
2006    

X-ray absorption spectroscopy identifies calcium-uranyl-carbonate complexes at environmental concentrations.    
Kelly, S.D., K.M. Kemner, and S.C. Brooks    
Geochimica et Cosmochimica Acta 71:4, 821-834  
2006    

Electron flow in acidic subsurface sediments cocontaminated with nitrate and uranium during nuclear weapons production.    
Edwards, L., K. Kusel, H. Drake, and J.E. Kostka    
Geochimica et Cosmochimica Acta :,   
2006    

A nested-cell approach for in situ remediation.    
Luo, J., W.-M. Wu, M.N. Fienen, P.M. Jardine, T.L. Mehlhorn, D.B. Watson, O.A. Cirpka, C.S. Criddle, and P.K. Kitanidis    
Ground Water 44:2, 266-274  
2006    

A parametric transfer function methodology for analyzing reactive transport in nonuniform flow.    
Luo, J., O.A. Cirpka, M.N. Fienen, W.M. Wu, T.L. Mehlhorn, J. Carley, P.M. Jardine, C.S. Criddle, and P.K. Kitanidis    
Journal of Contaminant Hydrology 83:1-2, 27-41  
2006    

Distribution of uranium contamination in weathered fractured saprolite/shale and ground water.    
Phillips, D.H., D.B. Watson, Y. Roh, T.L. Mehlhorn, J.W. Moon, and P.M. Jardine    
Journal of Environmental Quality 35:5, 1715-1730  
2006    

Physicochemical and mineralogical characterization of soil-saprolite cores from a field research site, Tennessee.    
Moon, J.W., Y. Roh, T.J. Phelps, D.H. Phillips, D.B. Watson, Y.J. Kim, and S.C. Brooks    
Journal of Environmental Quality 35:5, 1731-1741  
2006    

Development of a joint hydrogeophysical inversion approach and application to a contaminated fractured aquifer.    
Chen, J., S. Hubbard, J. Peterson, K. Williams, M. Fienen, P. Jardine, and D. Watson    
Water Resources Research 42:W06425, doi:10.1029/2005WR004694  
2006    

Permeable Environmental Leaching Capsules (PELCAPs) for In Situ Evaluation of Contaminant Immobilization in Soil.    
Brooks, S.C. and B. Spalding    
Abstracts of Papers of the American Chemical Society 230:, U1783-U1783  
2005    

Effect of oxidation rate and Fe(II) state on microbial nitrate-dependent Fe(III) mineral formation.    
Senko, J.M., T.A. Dewers, and L.R. Krumholz    
Applied and Environmental Microbiology 71:11, 7172-7177  
2005    

Changes in Bacterial Community Structure Correlate with Initial Operating Conditions of a Field-scale Denitrifying Fluidized Bed Reactor.    
Hwang, C., W.-M Wu, T. J. Gentry, J. Carley, S.L. Carroll, C. Schadt, D. Watson, P.M. Jardine, J. Zhou, R.F. Hickey, C.S. Criddle, and M.W. Fields    
Applied Microbiology and Biotechnology 71:5, 748-760  
2005    

Uranium (VI) reduction by denitrifying biomass.    
Wu, W.M., B. Gu, M.W. Fields, M. Gentile, Y. Ku, H. Yan, S. Tiquias, T. Yan, J. Nyman, J. Zhou, P.M. Jardine, and C.S. Criddle    
Bioremediation Journal 9:1, 13-Jan  
2005    

Conceptual and numerical model of uranium(VI) reductive immobilization in fractured subsurface sediments.    
Roden, E.E. and T.D. Scheibe    
Chemosphere 59:5, 617-628  
2005    

Extraction of oxidized and reduced forms of uranium from contaminated soils: effects of carbonate concentration and pH.    
Zhou, P. and B. Gu    
Environmental Science & Technology 39:12, 4435-4440  
2005    

Influence of Sediment Bioreduction and Reoxidation on Uranium Sorption.    
Liu, C., J. M. Zachara, L. Zhong, R. Kukkadapu, J.E. Szecsody, and D. W. Kennedy    
Environmental Science & Technology 39:11, 4125-4133  
2005    

Mass-transfer limitations for nitrate removal in a uranium-contaminated aquifer.    
Luo, J., O.A. Cirpka, W.-M. Wu, M.N. Fienen, P.M. Jardine, T.L. Mehlhorn, D.B. Watson, C.S. Criddle, and P.K. Kitanidis    
Environmental Science & Technology 39:21, 8453-8459  
2005    

Natural humics impact uranium bioreduction and oxidation.    
Gu, B.H., H. Yan, P. Zhou, D. B. Watson, M. Park, and J. Istok    
Environmental Science & Technology 39:14, 5268-5275  
2005    

Uranium reduction in sediments under diffusion-limited transport of organic carbon.    
Tokunaga, T. K., J.M. Wan, J. Pena, E.L. Brodie, M.K. Firestone, T.C. Hazen, S.R. Sutton, A. Lanzirotti, and M. Newville    
Environmental Science & Technology 39:18, 7077-7083  
2005    

Impacts on microbial communities and cultivable isolates from groundwater contaminated with high levels of nitric acid-uranium waste.    
Fields, M.W., T.F. Yan, S.K. Rhee, S.L. Carroll, P.M. Jardine, D.B. Watson, C.S. Criddle, and J.Z. Zhou    
FEMS Microbiology Ecology 53:3, 417-428  
2005    

Mineral precipitation and corrosion in a long-term zero-valent iron reactive barrier.    
Phillips, D.H., D.B. Watson, B. Gu, Y. Roh, and S. K. Choi    
Geochimica et Cosmochimica Acta 69:10, A266-A266  
2005    

Plume and lithologic profiling with surface resistivity and seismic tomography.    
Watson, D.B., W.E. Doll, T.J. Gamey, J.R. Sheehan, and P.M. Jardine    
Ground Water 43:2, 169-177  
2005    
"This is an electronic version of an article published in Ground Water: complete citation information for the final version of the paper, as published in the print edition of Ground Water, is available on the Blackwell Synergy online delivery service, ac "available on the Blackwell Synergy online delivery service, accessible via the journalÆs website at http://www.blackwellpublishing.com/gw or http://www.blackwell-synergy.com."
Link


The Three-Point Problem, Vector Analysis and Extension to the N-Point Problem.    
Fienen, M.N.    
Journal of Geoscience Education 53:3, 257-262  
2005    

Semi-analytical homogeneous anisotropic capture zone delineation.    
Fienen, M.N., J. Luo, and P.K. Kitanidis    
Journal of Hydrology 312:4-Jan, 39-50  
2005    

A cultivation-independent investigation of microbial communities during in situ biostimulation of subsurface sediment co-contaminated with uranium and nitrate.    
North, N.N., S.L. Dollhopf, L. Petrie, J.D. Istok, D.L. Balkwill, and J.E. Kostka    
Applied and Environmental Microbiology 70:8, 4911-4920  
2004    

Change in bacterial community structure during in situ Biostimulation of subsurface sediment cocontaminated with uranium and nitrate.    
North, N.N., S.L. Dollhopf, L. Petrie, J. D. Istok, D. L. Balkwill, and J.E. Kostka    
Applied and Environmental Microbiology 70:8, 4911-4920  
2004    

Composition and diversity of microbial communities recovered from surrogate minerals incubated in an acidic uranium-contaminated aquifer.    
Reardon, C. L., D.E. Cummings, L.M. Petzke, B.L. Kinsall, D.B. Watson, B.M. Peyton, G.G. Geesey    
Applied and Environmental Microbiology 70:10, 6037-6046  
2004    

Coupling of functional gene diversity and geochemical data from environmental samples.    
Palumbo, A.V. J.C. Schryver, M.W. Fields, C.E. Bagwell, J.Z. Zhou, T. Yan, X. Liu, and C.C. Brandt    
Applied and Environmental Microbiology 70:11, 6525-6534  
2004    

Isolation, characterization, and U(VI)-reducing potential of a facultatively anaerobic, acid-resistant bacterium from low-pH, nitrate- and U(VI)-contaminated subsurface sediment and description of Salmonella subterranea sp nov.    
Shelobolina, E.S., S.A. Sullivan, K.R. O'Neill, K.P. Nevin, D.R. Lovley    
Applied and Environmental Microbiology 70:5, 2959-2965  
2004    

Development and evaluation of microarray-based whole-genome hybridization for detection of microorganisms within the context of environmental applications.    
Wu, L.Y., D.K. Thompson, X. D. Liu, M. W. Fields, C. E. Bagwell, J. M. Tiedje, J. Z. Zhou    
Environmental Science & Technology 38:24, 6775-6782  
2004    

In situ bioreduction of technetium and uranium in a nitrate-contaminated aquifer.    
Istok, J.D., J.M. Senko, L.R. Krumholz, D. Watson, M.A. Bogle, A. Peacock, Y.J. Chang, D.C. White    
Environmental Science & Technology 38:2, 468-475  
2004    

Sorption and binary exchange of nitrate, sulfate, and uranium on an anion-exchange resin.    
Gu, B.H., Y.K. Ku, and P.M. Jardine    
Environmental Science & Technology 38:11, 3184-3188  
2004    

An application of Bayesian inverse methods to vertical deconvolution of hydraulic conductivity in a heterogeneous aquifer at Oak Ridge National Laboratory.    
Fienen, M.N., P.K. Kitanidis, D. Watson, P. Jardine    
Mathematical Geology 36:1, 101-126  
2004    

Utilization of microbial biofilms as monitors of bioremediation.    
Peacock, A.D., Y.J. Chang, J.D. Istok, L. Krumholz, R. Geyer, B. Kinsall, D. Watson, K.L. Sublette, and D.C. White    
Microbial Ecology 47:3, 284-292  
2004    

Enumeration and characterization of iron(III)-reducing microbial communities from acidic subsurface sediments contaminated with uranium(VI).    
L. Petrie,N. N. North, S. L. Dollhopf, D. L. Balkwill, J. E. Kostka    
Applied and Environmental Microbiology 69:12, 7467-7479  
2003    

Molecular diversity and characterization of nitrite reductase gene fragments (nirK and nirS) from nitrate- and uranium-contaminated groundwater.    
T. F. Yan,M. W. Fields, L. Y. Wu, Y. G. Zu, J. M. Tiedje, J. Z. Zhou    
Environmental Microbiology 5:1, 13-24  
2003    

"Forced mass balance" technique for estimating in situ transformation rates of sorbing solutes in groundwater.    
K. J. Hageman,J. A. Field, J. D. Istok, M. H. Schroth    
Environmental Science & Technology 37:17, 3920-3925  
2003    

Geochemical reactions and dynamics during titration of a contaminated groundwater with high uranium, aluminum, and calcium".    
B. H. Gu,S. C. Brooks, Y. Roh, P. M. Jardine    
Geochimica et Cosmochimica Acta 67:15, 2749-2761  
2003    

Potential for in situ bioremediation of a low-pH, high-nitrate uranium-contaminated groundwater.    
Shelobolina, E.S., K. O'Neill, K.T. Finneran, L.A. Hayes, and D.R. Lovley    
Soil & Sediment Contamination 12:6, 865-884  
2003    

Microbiological characteristics in a zero-valent iron reactive barrier.    
B. H. Gu,D. B. Watson, L. Y. Wu, D. H. Phillips, D. C. White, J. Z. Zhou    
Environmental Monitoring and Assessment 77:3, 293-309  
2002    

In-situ evidence for uranium immobilization and remobilization.    
J. M. Senko,J. D. Istok, J. M. Suflita, L. R. Krumholz    
Environmental Science & Technology 36:7, 1491-1496  
2002    

Biogeochemical, Mineralogical, and Hydrological Characteristics of a Iron Reactive Barrier Used for Treatment of Uranium and Nitrate.    
B. Gu, D.B. Watson, and D.H. Phillips    
Handbook of Groundwater Remediation using Permeable Reactive Barriers, Applications to Radionuclides, Trace Metals, and Nutrients :, 305-342  
2002    

Thermodynamics of Bromide Exchange on Ferrihydrite: Implications for Bromide Transport.    
Brooks,S. C. ,D. L. Taylor, P. M. Jardine    
Soil Science Society of America Journal 62:5, 1275-1279  
1998    


Other published articles by NABIR investigators


Hydrogeophysics. In:Treatise on Water Science. Peter Wilder editor, Oxford:Academic Press, 2011..    
Hubbard, S. and N. Linde    
 1:, 401-434  
2011     (Published)

Coupled modeling of hydrogeochemical and electrical resistivity data for exploring the impact of recharge on subsurface contamination.    
Kowalsky, M.B., E. Gasperikova, S. Finsterle, D.B. Watson, G. Baker, and S. Hubbard    
Water Resoruces Research 47:, 22 pp.  
2011     (Published)

Characterization of metabolism in the Fe(III)-reducing organism Geobacter sulfurreducens by constraint-based modeling.    
Mahadevan, R., D.R. Bond, J.E. Butler, A. Esteve-Nunez, M.V. Coppi, B.O. Palsson, C.H. Schilling, and D.R. Lovley    
Applied and Environmental Microbiology 72:2, 1558-1568  
2006     (Published)

Energetic consequences of nitrite stress in Desulfovibrio vulgaris Hildenborough, inferred from global transcriptional analysis.    
He, Q., K.H. Huang, Z.L. He, E.J. Alm, M.W. Fields, T.C. Hazen, A.P. Arkin, J.D. Wall, and J.Z. Zhou    
Applied and Environmental Microbiology 72:6, 4370-4381  
2006     (Published)

Improvement of oligonucleotide probe design criteria for functional gene microarrays in environmental applications.    
Liebich, J., C.W. Schadt, S.C. Chong, Z.L. He, S.K. Rhee, and J.Z. Zhou    
Applied and Environmental Microbiology 72:2, 1688-1691  
2006     (Published)

Metal reduction and iron biomineralization by a psychrotolerant Fe(III)-reducing bacterium, Shewanella sp strain PV-4.    
Roh,Y., H.C. Gao, H. Vali, D.W. Kennedy, Z.K. Yang, W.M. Gao, A.C. Dohnalkova, R.D. Stapleton, J.W. Moon, T.J. Phelps, J.K. Fredrickson, and J.Z. Zhou    
Applied and Environmental Microbiology 72:5, 3236-3244  
2006     (Published)

Suspension Array Analysis of 16S rRNA from Fe- and SO42-reducing Bacteria in Uranium-contaminated Sediments Undergoing Bioremediation.    
Chandler, D.P., A.E. Jarrell, E.E. Roden, J. Golova, B. Chernov, M.J. Schipma, A.D. Peacock, and P.E. Long    
Applied and Environmental Microbiology 72:7, 4672-4687  
2006     (Published)

Knock-out of SO1377 gene, which encodes the member of a conserved hypothetical bacterial protein family COG2268, results in alteration of iron metabolism, increased spontaneous mutation and hydrogen peroxide sensitivity in Shewanella oneidensis MR-1.    
Gao, W.M., Y.Q. Liu, C.S. Giometti, S.L. Tollaksen, T. Khare, L.Y. Wu, D.M. Klingeman, M.W. Fields, and J. Zhou    
BMC Genomics 7:,   
2006     (Published)

Anaerobic redox cycling of iron by freshwater sediment microorganisms.    
Weber, K.A., M.M. Urrutia, P.F. Churchill, R.K. Kukkadapu, and E.E. Roden    
Environmental Microbiology 8:1, 100-113  
2006     (Published)

The effect of emergent macrophytes on the dynamics of sulfur species and trace metals in wetland sediments.    
Choi, J.H., S.S. Park, and P.R. Jaffe    
Environmental Pollution 140:2, 286-293  
2006     (Published)

Determination of the formation constants of ternary complexes of uranyl and carbonate with alkaline earth metals (Mg2+, Ca2+, Sr, and Ba2+ using anion exchange method.    
Dong, W.and S.C. Brooks    
Environmental Science & Technology 40:15, 4689-4695  
2006     (Published)

Effects of Nonionic Surfactants on the Cell Surface Hydrophobicity and Apparent Hamaker Constant of a Sphingomonas Sp.    
Brown, D.G. and P.R. Jaffe    
Environmental Science & Technology 40:1, 195-201  
2006     (Published)

Effects of solid-to-solution ratio on uranium(VI) adsorption and its implications.    
Cheng, T., M.O. Barnett, E.E. Roden, and J.L. Zhuang    
Environmental Science & Technology 40:10, 3243-3247  
2006     (Published)

Thermodynamic constraints on the oxidation of biogenic UO2 by Fe(III) (hydr) oxides.    
Ginder-Vogel, M., C.S. Criddle, and S. Fendorf    
Environmental Science & Technology 40:11, 3544-3550  
2006     (Published)

Reductive biotransformation of Fe in shale-limestone saprolite containing Fe(III) oxides and Fe(II)/Fe(III) phyllosilicates.    
Kukkadapu, R.K., J.M. Zachara, J.K. Fredrickson, J.P. McKinley, D.W. Kennedy, S.C. Smith, and H. Dong    
Geochimica et Cosmochimica Acta 70:14, 3662-3676  
2006     (Published)

Transport and biogeochemical reaction of metals in a physically and chemically heterogeneous aquifer.    
Scheibe, T.D., Y. Fang, C.J. Murray, E.E. Roden, J. Chen, Y.-J. Chien, S.C. Brooks, and S.S. Hubbard    
Geosphere 2:4, 220-235  
2006     (Published)

Change of collision efficiency with distance in bacterial transport experiments.    
Dong, H.L., T.D. Scheibe, W.P. Johnson, C.M. Monkman, and M.E. Fuller    
Ground Water 44:3, 415-429  
2006     (Published)

Models to determine first-order rate coefficients from single-well push-pull tests.    
Schroth, M.H. and J.D. Istok    
Ground Water 44:2, 275-283  
2006     (Published)

DNA microarray and proteomic analyses of the RpoS regulon in Geobacter sulfurreducens.    
Nunez, C., A. Esteve-Nunez, C. Giometti, S. Tollaksen, T. Khare, W. Lin, D.R. Lovley, and B.A. Methe    
Journal of Bacteriology 188:8, 2792-2800  
2006     (Published)

Genetic Characterization of a Single Bifunctional Enzyme for Fumarate Reduction and Succinate Oxidation in Geobacter Sulfurreducens and Engineering of Fumarate Reduction in Geobacter Metallireducens.    
Butler, J.E., R.H. Glaven, A. Esteve-Nunez, C. Nunez, E.S. Shelobolina, D.R. Bond, and D.R. Lovley    
Journal of Bacteriology 188:2, 450-455  
2006     (Published)

Push-pull tests evaluating in situ aerobic cometabolism of ethylene, propylene, and cis-1,2-dichloroethylene.    
Kim, Y., J.D. Istok, and L. Semprini    
Journal of Contaminant Hydrology 82:2-Jan, 165-181  
2006     (Published)

Effects of plants on the removal of hexavalent chromium in wetland sediments.    
Xu, S. and P.R. Jaffe    
Journal of Environmental Quality 35:1, 334-341  
2006     (Published)

Changes in organic matter biodegradability influencing sulfate reduction in an aquifer contaminated by landfill leachate.    
Harris, S.H., J.D. Istok, J.M. Suflita    
Microbial Ecology 51:4, 535-542  
2006     (Published)

Vadose zone flow and transport of dissolved organic carbon at multiple scales in humid regimes.    
Jardine, P.M. M.A. Mayes, P.J. Mulholland, P.J. Hanson, J.R. Tarver, R.J. Luxmoore, J.F. McCarthy, and G.V. Wilson    
Vadose Zone Journal 5:1, 140-152  
2006     (Published)

Biomineralization of uranium in the presence of organic phosphorus.    
Taillefert, M., J.R. Elsenbeck, and P.A. Sobecky    
Abstracts of Papers of the American Chemical Society 229:, U896-U896  
2005     (Published)

Determining organic contaminant transformation rates in groundwater.    
Field, J.A., J.D. Istok, P. Bennett, K. Hageman, M.E. Dolan, L. Semprini, M. Schroth, and T.E. Buscheck    
Abstracts of Papers of the American Chemical Society 230:, U1760-U1760  
2005     (Published)

Effects of ionic strength on the transformation of U(VI) oxyhydroxides to U(VI) phosphate solids.    
Shepler, C.G., T. Oshiro, B.N. Bottenus, T.C. Hazen, H. Nitsche, and S.B. Clark    
Abstracts of Papers of the American Chemical Society 229:, U305-U305  
2005     (Published)

Genome-based approaches for investigating and optimizing uranium bioremediation and electricity generation by geobacter species.    
Coppi, M. and D.R. Lovley    
Abstracts of Papers of the American Chemical Society 229:, U1178-U1178  
2005     (Published)

A method adapting microarray technology for signature-tagged mutagenesis of Desulfovibrio desulfuricans G20 and Shewanella oneidensis MR-1 in anaerobic sediment survival experiments.    
Groh, J.L., Q.W. Luo, J.D. Ballard, L.R. Krumholz    
Applied and Environmental Microbiology 71:11, 7064-7074  
2005     (Published)

Characterization of citrate synthase from Geobacter sulfurreducens and evidence for a family of citrate synthases similar to those of eukaryotes throughout the Geobacteraceae.    
Bond, D.R., T. Mester, C.L. Nesbo, A.V. Izquierdo-Lopez, F.L. Collart, D.R. Lovley    
Applied and Environmental Microbiology 71:7, 3858-3865  
2005     (Published)

Characterization of microbial community structure in gulf of mexico gas hydrates: Comparative analysis of DNA- and RNA-derived clone libraries.    
H. J. Mills,R. J. Martinez, S. Story, P. A. Sobecky    
Applied and Environmental Microbiology 71:6, 3235-3247  
2005     (Published)

Direct microbial reduction and subsequent preservation of uranium in natural near-surface sediment.    
Suzuki, Y., S.D. Kelly, K.M. Kemner, and J.F. Banfield    
Applied and Environmental Microbiology 71:4, 1790-1797  
2005     (Published)

DNA microarray analysis of nitrogen fixation and Fe(III) reduction in Geobacter Sulfurreducens.    
Methe, B.A., J. Webster, K. Nevin, J. Butler, D.R. Lovley    
Applied and Environmental Microbiology 71:5, 2530-2538  
2005     (Published)

Empirical establishment of oligonucleotide probe design criteria.    
He, Z.L.,L. Y. Wu, X.Y. Li, M.W. Fields, J.Z. Zhou    
Applied and Environmental Microbiology 71:7, 3753-3760  
2005     (Published)

Evidence for involvement of an electron shuttle in electricity generation by Geothrix fermentans.    
Bond, D.R., D.R. Lovley    
Applied and Environmental Microbiology 71:4, 2186-2189  
2005     (Published)

Microbiological and geochemical heterogeneity in an in situ uranium bioremediation field site.    
Vrionis,H.A., R.T. Anderson, I. Ortiz-Bernad, K.R. O'Neill, C.T. Resch, A.D. Peacock, R. Dayvault, D.C. White, P.E. Long, D.R. Lovley    
Applied and Environmental Microbiology 71:10, 6308-6318  
2005     (Published)

Outer membrane C-type cytochromes Rrequired for Fe(III) and Mn(IV) oxide reduction in Geobacter Sulfurreducens.    
Mehta, T., M.V. Coppi, S.E. Childers, D.R. Lovley    
Applied and Environmental Microbiology 71:12, 8634-8641  
2005     (Published)

Potential for quantifying expression of the Geobacteraceae citrate synthase gene to assess the activity of Geobacteraceae in the subsurface and on current-harvesting electrodes.    
Holmes, D.E., K.P. Nevin, R.A. O'Neil, J.E. Ward, L.A. Adams, T.L. Woodard, H.A. Vrionis, D.R. Lovley    
Applied and Environmental Microbiology 71:11, 6870-6877  
2005     (Published)

Use of microarrays with different probe sizes for monitoring gene expression.    
He, Z.L., L.Y. Wu, M.W. Fields, J.Z. Zhou    
Applied and Environmental Microbiology 71:9, 5154-5162  
2005     (Published)

A novel Geobacteraceae-specific outer membrane protein J (OmpJ) is essential for electron transport to Fe (III) and Mn (IV) oxides in Geobacter sulfurreducens.    
Afkar, E., G. Reguera, M. Schiffer, and D.R. Lovley    
BMC Microbiology 5:,   
2005     (Published)

In silico biology meets in situ phenomenology.    
Lovley D. R.    
Environmental Microbiology 7:4, 478-479  
2005     (Published)

Bioreduction of uranium in a contaminated soil column.    
Gu, B.H., W. M. Wu, M. A. Ginder-Vogel, H. Yan, M. W. Fields, J. Zhou, S. Fendorf, C. S. Criddle, P. M. Jardine    
Environmental Science & Technology 39:13, 4841-4847  
2005     (Published)

Chemical reduction of U(VI) by Fe(II) at the solid-water interface using natural and synthetic Fe(III) oxides.    
Jeon, B.H., B. A. Dempsey, W.D. Burgos, M.O. Barnett, E.E. Roden    
Environmental Science & Technology 39:15, 5642-5649  
2005     (Published)

Chromate reduction and retention processes within arid subsurface environments.    
Ginder-Vogel, M., T. Borch, M. A. Mayes, P. M. Jardine, S. Fendorf    
Environmental Science & Technology 39:20, 7833-7839  
2005     (Published)

Coupled Fe(II)-Fe(III) electron and atom exchange as a mechanism for Fe isotope fractionation during dissimilatory iron oxide reduction.    
Crosby, H.A., C.M. Johnson, E.E. Roden,and B.L. Beard    
Environmental Science & Technology 39:17, 6698-6704  
2005     (Published)

Microbial Incorporation of C-13-labeled Acetate at the Field Scale: Detection of Microbes Responsible for Reduction of U(VI).    
Chang,Y.J.,P. E. Long, R. Geyer, A. D. Peacock, C. T. Resch, K. Sublette, S. Pfiffner, A. Smithgall, R. T. Anderson, H. A. Vrionis, J. R. Stephen, R. Dayvault, I. Ortiz-Bernad, D. R. Lovley, D. C. White    
Environmental Science & Technology 39:23, 9039-9048  
2005     (Published)

Permeable environmental leaching capsules (PELCAPs) for in situ evaluation of contaminant immobilization in soil.    
Spalding, B.P., S.C. Brooks    
Environmental Science & Technology 39:22, 8912-8918  
2005     (Published)

Reductive dechlorination of the vinyl chloride surrogate chlorofluoroethene in TCE-contaminated groundwater.    
Ennis, E., R. Reed, M. Dolan, L. Semprini, J. Istok, and J. Field    
Environmental Science & Technology 39:17, 6777-6785  
2005     (Published)

Remediation and recovery of uranium from contaminated subsurface environments with electrodes.    
Gregory, K.B.and D.R. Lovley    
Environmental Science & Technology 39:22, 8943-8947  
2005     (Published)

Reoxidation of bioreduced uranium under reducing conditions.    
Wan, J.M., T.K. Tokunaga, E. Brodie, Z.M. Wang, Z.P. Zheng, D. Herman, T.C. Hazen, M.K. Firestone, and S.R. Sutton    
Environmental Science & Technology 39:16, 6162-6169  
2005     (Published)

Role for Fe(III) minerals in nitrate-dependent microbial U(IV) oxidation.    
Senko, J. M., Y. Mohamed, T. A. Dewers, L. R. Krumholz    
Environmental Science & Technology 39:8, 2529-2536  
2005     (Published)

Simultaneous Utilization of Acetate and Hydrogen by Geobacter Sulfurreducens and Implications for use of Hydrogen as an Indicator of Redox Conditions.    
Brown, D.G.,J. Komlos, P. R. Jaffe    
Environmental Science & Technology 39:9, 3069-3076  
2005     (Published)

A general rate law for bacterial Fe(III) oxide reduction.    
Roden, E.E.    
Geochimica et Cosmochimica Acta 69:10, A357-A357  
2005     (Published)

Discerning geochemical and biogeochemical metal reduction through gamma sterilization.    
Bank, T.L., P.M. Jardine, M. Ginder-Vogel, S. E. Fendorf, M. E. Baldwin    
Geochimica et Cosmochimica Acta 69:10, A464-A464  
2005     (Published)

Experimental constraints on Fe isotope fractionation during magnetite and Fe carbonate formation coupled to dissimilatory hydrous ferric oxide reduction.    
Johnson, C.M., E.E. Roden, S.A. Welch, B.L. Beard    
Geochimica et Cosmochimica Acta 69:4, 963-993  
2005     (Published)

Fractionation of Fe isotopes during biogenic mineral formation by dissimilatory Fe(III) reduction (DIR).    
Johnson, C. M., E.E. Roden, B.L. Beard, H.A. Crosby    
Geochimica et Cosmochimica Acta 69:10, A209-A209  
2005     (Published)

Mechanisms of Fe isotope fractionation during dissimilatory Fe(III) reduction (DIR).    
Crosby, H.A. ,C. M. Johnson, B. L. Beard, E. E. Roden    
Geochimica et Cosmochimica Acta 69:10, A217-A217  
2005     (Published)

Reduction of U by adsorbed vs. surface-precipitated Fe(II) at model cell surfaces.    
Boyanov, M.I. , E.J. 'Loughlin, S.D. Kelly, E. E. Roden, J. B. Fein, K. M. Kemner    
Geochimica et Cosmochimica Acta 69:10, A367-A367  
2005     (Published)

The interaction of U(VI) with Bacillus sphaericus.    
Shepler,C.G., S.C. Hull, T.E. Letain, T.C. Hazen, H. Nitsche, S.B. Clark    
Geochimica et Cosmochimica Acta 69:10, A233-A233  
2005     (Published)

Uranium Hydrogeochemistry of the Hanford Caliche Layer.    
Mayes,M.A.,M. N. Pace, S.E. Fendorf, P.M. Jardine, X.L. Yin    
Geochimica et Cosmochimica Acta 69:10, A424-A424  
2005     (Published)

Uranyl-calcium coordination in calcium carbonate systems.    
Kelly, S.D., S. C. Brooks, J. K. Fredrickson, E. T. Rasbury, C. Spotl, N. C. Sturchio, K. M. Kemner    
Geochimica et Cosmochimica Acta 69:10, A473-A473  
2005     (Published)

Geochemical controls on microbial nitrate-dependent U(IV) oxidation.    
Senko, J. M., J. M. Suflita, L. R. Krumholz    
Geomicrobiology Journal 22:8-Jul, 371-378  
2005     (Published)

Approximate solution for solute transport during spherical-flow push-pull tests.    
Schroth, M.H., J.D. Istok    
Ground Water 43:2, 280-284  
2005     (Published)

Trichlorofluoroethene: A reactive tracer for evaluating reductive dechlorination in large-diameter permeable columns.    
Field, J.A., R. L. Reed, J. D. Istok, L. Semprini, P. Bennett, T. E. Buscheck    
Ground Water Monitoring and Remediation 25:2, 68-77  
2005     (Published)

Effect of advective mass transfer on field scale fluid and solute movement: Field and modeling studies at a waste disposal site in fractured rock at Oak Ridge National Laboratory, Tennessee, USA.    
Gwo, J.P., P.M. Jardine, and W. Sanford    
Hydrogeology Journal 13:4, 565-583  
2005     (Published)

Geobacter Bemidjiensis Sp Nov. and Geobacter Ssychrophilus Sp Nov., Two Novel Fe(III)-reducing Subsurface Isolates.    
Nevin, K.P.,D. E. Holmes, T. L. Woodard, E. S. Hinlein, D. W. Ostendorf, D. R. Lovley    
International Journal of Systematic and Evolutionary Microbiology 55:, 1667-1674  
2005     (Published)

Adaptation to disruption of the electron transfer pathway for Fe(III) reduction in Geobacter sulfurreducens.    
Leang, C., L.A. Adams, K.J. Chin, K.P. Nevin, B.A. Methe, J. Webster, M.L. Sharma, and D.R. Lovley    
Journal of Bacteriology 187:17, 5918-5926  
2005     (Published)

OmcF, a putative c-type monoheme outer membrane cytochrome required for the expression of other outer membrane cytochromes in Geobacter sulfurreducens.    
Kim, B.C.,C. Leang, Y.H.R. Ding, R.H. Glaven, M.V. Coppi, and D.R. Lovley    
Journal of Bacteriology 187:13, 4505-4513  
2005     (Published)

Modeling field-scale multiple tracer injection at a low-level waste disposal site in fractured rocks: Effect of multiscale heterogeneity and source term uncertainty on conceptual understanding of mass transfer processes.    
Gwo, J.P., P.M. Jardine, W.E. Sanford    
Journal of Contaminant Hydrology 77:2-Jan, 91-118  
2005     (Published)

Numerical simulations of radon as an in situ partitioning tracer for quantifying NAPL contamination using push-pull tests.    
Davis, B.M.,J.D. Istok, L. Semprini    
Journal of Contaminant Hydrology 78:2-Jan, 87-103  
2005     (Published)

Physical versus chemical effects on bacterial and bromide transport as determined from on site sediment column pulse experiments.    
Hall, J.A., B.J. Mailloux, T.C. Onstott, T.D. Scheibe, M.E. Fuller, H. Dong, and M.F. DeFlaun    
Journal of Contaminant Hydrology 76:4-Mar, 295-314  
2005     (Published)

An evaluation of methods and available software for seismic refraction tomography analysis.    
Sheehan, J.R., W.E. Doll, and W.A. Mandell    
Journal of Environmental and Engineering Geophysics 10:1, 21-34  
2005     (Published)

Oxidative remobilization of biogenic uranium(IV) precipitates: effects of iron(II) and pH.    
Zhong, L.R., C.X. Liu, J.M. Zachara, D.W. Kennedy, J.E. Szecsody, and B. Wood    
Journal of Environmental Quality 34:5, 1763-1771  
2005     (Published)

Design and use of functional gene microarrays (FGAs) for the characterization of microbial communities.    
Schadt, C.W., J. Liebich, S.C. Chong, T.J. Gentry, Z.L. He, H.B. Pan, J.Z. Zhou    
Microbial Imaging 34:, 331-+  
2005     (Published)

Ammonium oxidation coupled to dissimilatory reduction of iron under anaerobic conditions in wetland soils.    
Clement, J.C. J. Shrestha, J. G. Ehrenfeld, P. R. Jaffe    
Soil Biology & Biochemistry 37:12, 2323-2328  
2005     (Published)

CdEDTA(2-) adsorpt ion to weathered shale-limestone saprolite: Modeling the adsorption mechanism and effect of al-oxide co-dissollition on fe-oxide dissolution dynamics.    
Wo, J.P.G. and P.M. Jardine    
Soil Science 170:5, 325-339  
2005     (Published)

Using soil physical and chemical properties to estimate bulk density.    
Heuscher, S.A., C.C. Brandt, P.M. Jardine    
Soil Science Society of America Journal 69:1, 51-56  
2005     (Published)

Quantifying the effects of small-scale heterogeneities on flow and transport in undisturbed core from the Hanford formation.    
Pace, M.N, M. A. Mayes, P. M. Jardine, T. L. Mehlhorn, J. M. Zachara, B. N. Bjornstad    
Vadose Zone Journal 4:4, 1220-1223  
2005     (Published)

Modeling the effects of gas phase CO2 intrusion on the biogeochemistry of variably saturated soils.    
Altevogt, A.S., P. R. Jaffe    
Water Resources Research 41:9,   
2005     (Published)

Push-pull test evaluation of the in situ aerobic cometabolism of chlorinated ethenes by toluene-utilizing microorganisms.    
Azizian, M.F. J.D. Istok, L. Semprini    
Water Science and Technology 52:7, 35-40  
2005     (Published)

Assessing the effects of peat amendments on the mobility of cadmium in soils.    
Brooks, S.C. P.M. Jardine, M.O. Barnett, and S. Fendorf    
Abstracts of Papers of the American Chemical Society 227:, U1106-U1106  
2004     (Published)

Electrodes as electron donors for respiration and bioremediation.    
Gregory, K. B., D. Bond, and D.R. Lovley    
Abstracts of Papers of the American Chemical Society 228:, U638-U639  
2004     (Published)

Evaluation of the in situ aerobic cometabolism of chlorinated ethenes by toluene-utilizing microorganisms using push-pull tests.    
Azizian, M.F., J. Istok, and L. Semprini    
Abstracts of Papers of the American Chemical Society 227:, U1047-U1047  
2004     (Published)

Oxidation of biogenic uraninite (U(IV)O-2) by manganese oxides.    
Brooks, S.C. S.L. Carroll, and J. Fredrickson    
Abstracts of Papers of the American Chemical Society 227:, U78-U78  
2004     (Published)

Similarity of surface reactivities of hydrous ferric oxide and hematite.    
Jang, J.H., B.A. Dempsey, W.D. Burgos, and E.E. Roden    
Abstracts of Papers of the American Chemical Society 228:, U632-U632  
2004     (Published)

Uranium (VI) adsorption to goethite-coated sand: Effects of phosphate.    
Cheng, T., M.O. Barnett, and E.E. Roden    
Abstracts of Papers of the American Chemical Society 227:, U1112-U1112  
2004     (Published)

Dissimilatory Fe(III) and Mn(IV) reduction.    
Lovley, D.R., D.E. Holmes, K.P. Nevin    
Advances in Microbial Physiology, Vol. 49 49:, 219-286  
2004     (Published)

Alkaline anaerobic respiration: Isolation and characterization of a novel alkaliphilic and metal-reducing bacterium.    
Ye, Q., Y. Roh, S.L. Carroll, B. Blair, J.Z. Zhou, C.L. Zhang, and M.W. Fields    
Applied and Environmental Microbiology 70:9, 5595-5602  
2004     (Published)

Differential Expression of Desulfovibrio Vulgaris Genes in Response to Cu(II) and Hg(II) Toxicity.    
Chang, I.S., J.L. Groh, M. M. Ramsey, J. D. Ballard, L. R. Krumholz    
Applied and Environmental Microbiology 70:3, 1847-1851  
2004     (Published)

Direct correlation between rates of anaerobic respiration and levels of mRNA for key respiratory genes in Geobacter sulfurreducens.    
Chin, K.J., A. Esteve-Nunez, C. Leang, D.R. Lovley    
Applied and Environmental Microbiology 70:9, 5183-5189  
2004     (Published)

Electron transfer by Desulfobulbus propionicus to Fe(III) and graphite electrodes.    
Holmes, D.E. D.R. Bond, D.R. Lovley    
Applied and Environmental Microbiology 70:2, 1234-1237  
2004     (Published)

Geobacter sulfurreducens can grow with oxygen as a terminal electron acceptor.    
Lin, W.C., M.V. Coppi, and D.R. Lovley    
Applied and Environmental Microbiology 70:4, 2525-2528  
2004     (Published)

Identification of Members of the Metabolically Active Microbial Populations Associated with Beggiatoa Species Mat Communities form Gulf of Mexico Cold-seep Sediments.    
Mills, H.J., R.J. Martinez, S. Story, P. A. Sobecky    
Applied and Environmental Microbiology 70:9, 5447-5458  
2004     (Published)

In situ expression of nifD in Geobacteraceae in subsurface sediments.    
Holmes, D.E. , K.P. Nevin, D.R. Lovley    
Applied and Environmental Microbiology 70:12, 7251-7259  
2004     (Published)

Microbial diversity and heterogeneity in sandy subsurface soils.    
Zhou, J.Z., B.C. Xia, H. Huang, A.V. Palumbo, J.M. Tiedje    
Applied and Environmental Microbiology 70:3, 1723-1734  
2004     (Published)

Periplasmic cytochrome c(3) of Desulfovibrio vulgaris is directly involved in H-2-mediated metal but not sulfate reduction.    
Elias, D.A., J.M. Suflita, M.J. McInerney, L. R. Krumholz    
Applied and Environmental Microbiology 70:1, 413-420  
2004     (Published)

Resistance of solid-phase U(VI) to microbial reduction during in situ bioremediation of uranium-contaminated groundwater.    
Ortiz-Bernad, I., R.T. Anderson, H.A. Vrionis, and D.R. Lovley    
Applied and Environmental Microbiology 70:12, 7558-7560  
2004     (Published)

Vanadium respiration by Geobacter metalireducens: Novel strategy for in situ removal of vanadium from groundwater.    
Ortiz-Bernad, I., R.T. Anderson, H.A. Vrionis, and D.R. Lovley    
Applied and Environmental Microbiology 70:5, 3091-3095  
2004     (Published)

A derivative of the menaquinone precursor 1,4-dihydroxy-2-naphthoate is involved in the reductive transformation of carbon tetrachloride by aerobically grown Shewanella oneidensis MR-1.    
Ward, M.J., Q.S. Fu, K.R. Rhoads, C.H. J. Yeung, A.M. Spormann, and C.S. Criddle    
Applied Microbiology and Biotechnology 63:5, 571-577  
2004     (Published)

Effect of iron bioavailability on dissolved hydrogen concentrations during microbial iron reduction.    
Komlos, J. and P.R. Jaffe    
Biodegradation 15:5, 315-325  
2004     (Published)

Enhancement of carbon sequestration in US soils.    
Post, W.M., R.C. Izaurralde, J.D. Jastrow, B.A. McCarl, J.E. Amonette, Bailey, V.L., P.M. Jardine, T.O. West, J. Z. Zhou    
Bioscience 54:10, 895-908  
2004     (Published)

Soil Chemistry and Mineralogy: Kinetic Models.    
Jardine, P.M.    
Encyclopedia of Soils in the Environment :,   
2004     (Published)

Dissolution of a mineral phase in potable aquifers due to CO2 releases from deep formations; effect of dissolution kinetics.    
Wang, S. and P.R. Jaffe    
Energy Conversion and Management 45:18-19, 2833-2848  
2004     (Published)

Graphite electrodes as electron donors for anaerobic respiration.    
Gregory, K.B. D.R. Bond, D.R. Lovley    
Environmental Microbiology 6:6, 596-604  
2004     (Published)

Apparent decreases in colloid deposition rate coefficients with distance of transport under unfavorable deposition conditions: A general phenomenon.    
Li, X.Q., T.D. Scheibe, and W.P. Johnson    
Environmental Science & Technology 38:21, 5616-5625  
2004     (Published)

Effects of phosphate on uranium(VI) adsorption to goethite-coated sand.    
Cheng, T., M.O. Barnett, E.E. Roden, J.L. Zhuang    
Environmental Science & Technology 38:22, 6059-6065  
2004     (Published)

Microbial reduction of U(VI) at the solid-water interface.    
Jeon, B. H., S.D. Kelly, K.M. Kemner, M.O. Barnett, W.D. Burgos, B.A. Dempsey, E.E. Roden    
Environmental Science & Technology 38:21, 5649-5655  
2004     (Published)

Technetium reduction in sediments of a shallow aquifer exhibiting dissimilatory iron reduction potential.    
Wildung, R. E., S.W. Li, C.J. Murray, K.M. Krupka, Y.Xie, N.J. Hess, E.E. Roden    
FEMS Microbiology Ecology 49:1, 151-162  
2004     (Published)

Isotopic constraints on biogeochemical cycling of Fe.    
Johnson, C.M. B.L. Beard, E.E. Roden, D.K. Newman, and K.H. Nealson    
Geochemistry of Non-Traditional Stable Isotopes 55:, 359-408  
2004     (Published)

Analysis of long-term bacterial vs. chemical Fe(III) oxide reduction kinetics.    
Roden, E.E.    
Geochimica et Cosmochimica Acta 68:15, 3205-3216  
2004     (Published)

Barite deposition resulting from phototrophic sulfide-oxidizing bacterial activity.    
Senko, J.M., B.S. Campbell, J.R. Henriksen, M.S. Elshahed, T.A. Dewers, L.R. Krumholz    
Geochimica et Cosmochimica Acta 68:4, 773-780  
2004     (Published)

Reduction of TcO4- by sediment-associated biogenic Fe(II).    
Fredrickson, J.K., J. M. Zachara, D. W. Kennedy, R. K. Kukkadapu, J. P. McKinley, S. M. Heald, C. X. Liu, A. E. Plymale    
Geochimica et Cosmochimica Acta 68:15, 3171-3187  
2004     (Published)

Characterization of a neutrophilic, chemolithoautotrophic Fe(II)-oxidizing beta-proteobacterium from freshwater wetland sediments".    
Sobolev, D. and E.E. Roden    
Geomicrobiology Journal 21:1, 1-10  
2004     (Published)

Potential for microscale bacterial Fe redox cycling at the aerobic-anaerobic interface.    
Roden, E.E., D. Sobolev, B. Glazer, and G.W. Luther    
Geomicrobiology Journal 21:6, 379-391  
2004     (Published)

Interactive models for ground water flow and solute transport.    
Scheibe, T.    
Ground Water 42:1, 8-+  
2004     (Published)

Push-pull tests for assessing in situ aerobic cometabolism.    
Kim, Y., J.D. Istok, L. Semprini    
Ground Water 42:3, 329-337  
2004     (Published)

Comparison of 16S rRNA, nifD, recA, gyrB, rpoB and fusA genes within the family Geobacteraceae fam. nov".    
Holmes, D.E. K.P. Nevin, D.R. Lovley    
International Journal of Systematic and Evolutionary Microbiology 54:, 1591-1599  
2004     (Published)

Identification of an uptake hydrogenase required for hydrogen-dependent reduction of Fe(III) and other electron acceptors by Geobacter sulfurreducens.    
Coppi, M.V., R.A. O'Neil, and D.R. Lovley    
Journal of Bacteriology 186:10, 3022-3028  
2004     (Published)

MacA a Diheme C-type Cytochrorne Involved in Fe(III) Reduction by Geobacter Sulfurreducens.    
Butler, J.E., F. Kaufmann, M.V. Coppi, C. Nunez, and D.R. Lovley    
Journal of Bacteriology 186:12, 4042-4045  
2004     (Published)

Preferential reduction of Fe(III) over fumarate by Geobacter sulfurreducens.    
Esteve-Nunez, A., C. Nunez, and D.R. Lovley    
Journal of Bacteriology 186:9, 2897-2899  
2004     (Published)

The RpoS sigma factor in the dissimilatory Fe(III)-reducing bacterium Geobacter sulfurreducens.    
Nunez, C., L. Adams, S. Childers, and D.R. Lovley    
Journal of Bacteriology 186:16, 5543-5546  
2004     (Published)

Quantifying the effects of fumarate on in situ reductive dechlorination rates.    
Hageman, K.J., J.A. Field, J.D. Istok, and L. Semprini    
Journal of Contaminant Hydrology 75:4-Mar, 281-296  
2004     (Published)

Temporal changes in soil partitioning and bioaccessibility of arsenic, chromium, and lead.    
Fendorf, S.M., J. La Force, and G.C. Li    
Journal of Environmental Quality 33:6, 2049-2055  
2004     (Published)

Comparison of aerobic and anaerobic biotreatment of municipal solid waste.    
Borglin, S.E. T.C. Hazen, C.M. Oldenburg, and P.T. Zawislanski    
Journal of the Air & Waste Management Association 54:7, 815-822  
2004     (Published)

Computational prediction of conserved operons and phylogenetic footprinting of transcription regulatory elements in the metal-reducing bacterial family Geobacteraceae.    
Yan, B., B.A. Methe, D.R. Lovley, and J. Krushkal    
Journal of Theoretical Biology 230:1, 133-144  
2004     (Published)

Impact of clay minerals on sulfate-reducing activity in aquifers.    
Wong, D., J.M. Suflita, J.P. McKinley, and L.R. Krumholz    
Microbial Ecology 47:1, 80-86  
2004     (Published)

Microbial communities associated with electrodes harvesting electricity from a variety of aquatic sediments.    
Holmes, D. E., D.R. Bond, R. A. O'Neill, C.E. Reimers, L.R. Tender, D. R. Lovley    
Microbial Ecology 48:2, 178-190  
2004     (Published)

Utilization of microbial biofilms as monitors of bioremediation.    
Peacock, A.D. , Y.J. Chang, J.D. Istok, L. Krumholz, R. Geyer, B. Kinsall, D. Watson, K. L. Sublette, D. C. White    
Microbial Ecology 47:3, 284-292  
2004     (Published)

Modeling the sorption kinetics of drivalent metal ions to hematite.    
Jeon, B.H., B.A. Dempsey, W.D., Burgos, R.A. Royer, E.E. Roden    
Water Research 38:10, 2499-2504  
2004     (Published)

Contaminant transport through subsurface material from the DOE Hanford Reservation.    
Pace, M.N., M.A. Mayes, P.M. Jardine, S. Fendorf, T.L. Melhorn, X. P. Yin, J.L. Ladd, J. Teerlink, J.M. Zachara    
Abstracts of Papers of the American Chemical Society 225:, U834-U834  
2003     (Published)

Coupled hydrological and geochemical processes governing the fate and transport of radionuclides and toxic metals in the Hanford vadose zone.    
Jardine, P.M., M.A. Mayes, S. Fendorf, M.N. Pace, X. P. Yin, J.M. Zachara, T.L. Mehlhorn    
Abstracts of Papers of the American Chemical Society 225:, U836-U836  
2003     (Published)

Coupled Hydrology and Geochemistry of Chelated Metals in Hanford and ORNL Sediments.    
Mayes,M. A.,M. N. Pace, X. P. L. Yin, P. M. Jardine, B. N. Bjornstad    
Abstracts of Papers of the American Chemical Society 226:, U471-U471  
2003     (Published)

Field-scale Transport of Chelated Metals in Contaminated Fractured Shale Bedrock.    
Mehlhorn,T.L. ,P. M. Jardine, S. C. Brooks    
Abstracts of Papers of the American Chemical Society 226:, U471-U471  
2003     (Published)

Kinetics and mechanisms of Co(II)EDTA oxidation, dissociation and adsorption on subsurface soils from the Hanford vadose zone.    
X. P. L. Yin, M. A. Mayes, M. N. Pace, P. M. Jardine, S. E. Fendorf, T. L. Mehlhorn    
Abstracts of Papers of the American Chemical Society 226:, U503-U503  
2003     (Published)

Reductive immobilization of uranium(VI) at the oxide-water interface.    
Jeon, B. H., E.E. Roden    
Abstracts of Papers of the American Chemical Society 225:, U925-U925  
2003     (Published)

Biotechnological application of metal-reducing microorganisms.    
J. R. Lloyd,D. R. Lovley, L. E. Macaskie    
Advances in Applied Microbiology 53:, 85-+  
2003     (Published)

Diversion of electron flow from methanogenesis to crystalline Fe(III) oxide reduction in carbon-limited cultures of wetland sediment microorganisms.    
E. E. Roden    
Applied and Environmental Microbiology 69:9, 5702-5706  
2003     (Published)

Microorganisms Associated with Uranium Bioremediation in a High-salinity Subsurface Sediment.    
K. P. Nevin,K. T. Finneran, D. R. Lovley    
Applied and Environmental Microbiology 69:6, 3672-3675  
2003     (Published)

Stimulating the in situ activity of Geobacter species to remove uranium from the groundwater of a uranium-contaminated aquifer.    
R. T. Anderson,H. A. Vrionis, I. Ortiz-Bernad, C. T. Resch, P. E. Long, R. Dayvault, K. Karp, S. Marutzky, D. R. Metzler, A. Peacock, D. C. White, M. Lowe, D. R. Lovley    
Applied and Environmental Microbiology 69:10, 5884-5891  
2003     (Published)

Geochemical reactions governing the fate of Co-NTA in contact with natural subsurface materials.    
Brooks, S.C. and S.L. Carroll    
Applied Geochemistry 18:3, 423-433  
2003     (Published)

Biochemical and genetic characterization of PpcA, a periplasmic c-type cytochrome in Geobacter sulfurreducens.    
J. R. Lloyd,C. Leang, A. L. H. Myerson, M. V. Coppi, S. Cuifo, B. Methe, S. J. Sandler, D. R. Lovley    
Biochemical Journal 369:, 153-161  
2003     (Published)

Understanding bias in microbial community analysis techniques due to rrn operon copy number heterogeneity.    
L. D. Crosby,C. S. Criddle    
Biotechniques 34:4, 790-+  
2003     (Published)

Cometabolism of Cr(VI) by Shewanella Oneidensis MR-1 Produces Cell-associated Reduced Chromium and Inhibits Growth.    
S. S. Middleton,R. B. Latmani, M. R. Mackey, M. H. Ellisman, B. M. Tebo, C. S. Criddle    
Biotechnology and Bioengineering 83:6, 627-637  
2003     (Published)

Carbon isotope signatures of fatty acids in Geobacter metallireducens and Shewanella algae.    
Zhang, C.L., Y.L. Li, Q. Ye, J. Fong, A.D. Peacock, E. Blunt, J. S. Fang, D.R. Lovley, and D.C. White    
Chemical Geology 195:4-Jan, 17-28  
2003     (Published)

Effects of Zn(II), Cu(II), Mn(II), Fe(II), NO3-, or SO42- at pH 6.5 and 8.5 on transformations of hydrous ferric oxide (HFO) as evidenced by Mossbauer spectroscopy.    
J. H. Jang,B. A. Dempsey, G. L. Catchen, W. D. Burgos    
Colloids and Surfaces A -Physicochemical and Engineering Aspects 221:3-Jan, 55-68  
2003     (Published)

Indigenous and contaminant microbes in ultradeep mines.    
T. C. Onstott,D. P. Moser, S. M. Pfiffner, J. K. Fredrickson, F. J. Brockman, T. J. Phelps, D. C. White, A. Peacock, D. Balkwill, R. Hoover, L. R. Krumholz, M. Borscik, T. L. Kieft, R. Wilson    
Environmental Microbiology 5:11, 1168-1191  
2003     (Published)

Metabolism of organic compounds in anaerobic, hydrothermal sulphate-reducing marine sediments.    
J. M. Tor,J. P. Amend, D. R. Lovley    
Environmental Microbiology 5:7, 583-591  
2003     (Published)

Fe(III) oxide reactivity toward biological versus chemical reduction.    
E. E. Roden    
Environmental Science & Technology 37:7, 1319-1324  
2003     (Published)

Inhihition of bacterial U(VI) reduction by calcium.    
Brooks, S.C., J.K. Fredrickson, S.L. Carroll, D.W. Kennedy, J.M. Zachara, A.E. Plymale, S.D. Kelly, K.M. Kemner, S. Fendorf    
Environmental Science & Technology 37:9, 1850-1858  
2003     (Published)

Inhihition of bacterial U(VI) reduction by calcium.    
S. C. Brooks, J. K. Fredrickson, S. L. Carroll, D. W. Kennedy, J. M. Zachara, A. E. Plymale, S. D. Kelly, K. M. Kemner, S. Fendorf    
Environmental Science & Technology 37:9, 1850-1858  
2003     (Published)

Kinetics and mechanisms for reactions of Fe(II) with iron(III) oxides.    
Jeon, B.H., B. A. Dempsey, W.D. Burgos    
Environmental Science & Technology 37:15, 3309-3315  
2003     (Published)

Determination of iron and sulfur cycling rates in bioturbated saltmarsh sediments with multicomponent inverse modeling.    
Y. Furukawa,A. C. Smith, J. E. Kostka    
Geochimica et Cosmochimica Acta 67:18, A114-A114  
2003     (Published)

Reaction-based Modeling of Quinone-mediated Bacterial Iron(III) Reduction.    
W. D. Burgos,Y. L. Fang, R. A. Royer, G. T. Yeh, J. J. Stone, B. H. Jeon, B. A. Dempsey    
Geochimica et Cosmochimica Acta 67:15, 2735-2748  
2003     (Published)

Immobilization of cobalt by sulfate-reducing bacteria in subsurface sediments.    
Krumholz, L.R., D.A. Elias, and J.M. Suflita    
Geomicrobiology Journal 20:1, 61-72  
2003     (Published)

Use of ferric and ferrous iron containing minerals for respiration by Desulfitobacterium frappieri.    
E. S. Shelobolina,C. G. Vanpraagh, D. R. Lovley    
Geomicrobiology Journal 20:2, 143-156  
2003     (Published)

An evaluation of conditioning data for solute transport prediction.    
T. D. Scheibe,Y. J. Chien    
Ground Water 41:2, 128-141  
2003     (Published)

Static and push-pull methods using radon-222 to characterize dense nonaqueous phase liquid saturations.    
B. M. Davis,J. D. Istok, L. Semprini    
Ground Water 41:4, 470-481  
2003     (Published)

Rhodoferax ferrireducens sp nov., a psychrotolerant, facultatively anaerobic bacterium that oxidizes acetate with the reduction of Fe(III).    
K. T. Finneran,C. V. Johnsen, D. R. Lovley    
International Journal of Systematic and Evolutionary Microbiology 53:, 669-673  
2003     (Published)

Geobacter sulfurreducens has two autoregulated lexA genes whose products do not bind the recA promoter: Differing responses of lexA and recA to DNA damage.    
M. Jara,C. Nunez, S. Campoy, A. R. F. de Henestrosa, D. R. Lovley, J. Barbe    
Journal of Bacteriology 185:8, 2493-2502  
2003     (Published)

OmcB, a c-type polyheme cytochrome, involved in Fe(III) reduction in Geobacter sulfurreducens.    
Leang, C., M.V. Coppi, and D.R. Lovley    
Journal of Bacteriology 185:7, 2096-2103  
2003     (Published)

Distribution of chromium contamination and microbial activity in soil aggregates.    
T. K. Tokunaga,J. M. Wan, T. C. Hazen, E. Schwartz, M. K. Firestone, S. R. Sutton, M. Newville, K. R. Olson, A. Lanzirotti, W. Rao    
Journal of Environmental Quality 32:2, 541-549  
2003     (Published)

Impact of sample preparation on mineralogical analysis of zero-valent iron reactive barrier materials.    
Phillips, D.H., B. Gu, D.B. Watson, and Y. Roh    
Journal of Environmental Quality 32:4, 1299-1305  
2003     (Published)

In situ reduction of chromium(VI) in heavily contaminated soils through organic carbon amendment.    
T. K. Tokunaga,J. M. Wan, M. K. Firestone, T. C. Hazen, K. R. Olson, D. J. Herman, S. R. Sutton, A. Lanzirotti    
Journal of Environmental Quality 32:5, 1641-1649  
2003     (Published)

Influence of soil geochemical and physical properties on the sorption and bioaccessibility of chromium(III).    
M. A. Stewart,P. M. Jardine, M. O. Barnett, T. L. Mehlhorn, L. K. Hyder, L. D. McKay    
Journal of Environmental Quality 32:1, 129-137  
2003     (Published)

Mineralogical characteristics and transformations during long-term operation of a zerovalent iron reactive barrier.    
D. H. Phillips,D. B. Watson, Y. Roh, B. Gu    
Journal of Environmental Quality 32:6, 2033-2045  
2003     (Published)

Transport of multiple tracers in variably saturated humid region structured soils and semi-arid region laminated sediments.    
Mayes, M.A., P.M. Jardine, T.L. Mehlhorn, B.N. Bjornstad, T. Ladd, and J.M. Zachara    
Journal of Hydrology 275:, 141-161  
2003     (Published)

A procedure for quantitation of total oxidized uranium for bioremediation studies.    
Elias, D.A., J.M. Senko, L.R. Krumholz    
Journal of Microbiological Methods 53:3, 343-353  
2003     (Published)

Evidence for Chimeric Sequences Formed during Random Arbitrarily Primed PCR.    
Chang, I.S.,J.D. Ballard, L. R. Krumholz    
Journal of Microbiological Methods 54:3, 427-431  
2003     (Published)

Importance of Gram-positive naphthalene-degrading bacteria in oil-contaminated tropical marine sediments.    
Zhuang, W.Q., J.H. Tay, A.M. Maszenan, L.R. Krumholz, and S.T.L. Tay    
Letters in Applied Microbiology 36:4, 251-257  
2003     (Published)

Characterization of microbial activities and U reduction in a shallow aquifer contaminated by uranium mill tailings.    
Elias, D.A., L.R. Krumholz, D. Wong, P.E. Long, J.M. Suflita    
Microbial Ecology 46:1, 83-91  
2003     (Published)

Competition between Fe(III)-reducing and methanogenic bacteria for acetate in iron-rich freshwater sediments.    
E. E. Roden,R. G. Wetzel    
Microbial Ecology 45:3, 252-258  
2003     (Published)

Cleaning up with genomics: Applying molecular biology to bioremediation.    
Lovley, D.R.    
Nature Reviews Microbiology 1:1, 35-44  
2003     (Published)

Genome of Geobacter Sulfurreducens: Metal Reduction in Subsurface Environments.    
Methe, B.A.,K.E. Nelson, J.A. Eisen, I.T. Paulsen, W. Nelson, J.F. Heidelberg,D. Wu,. Wu,N. Ward,M. J. Beanan,R. J. Dodson,R. Madupu,L. M. Brinkac,S. C. Daugherty,R. T. DeBoy,A. S. Durkin,M. Gwinn,J. F. Kolonay,S. A. Sullivan,D. H. Haft,J. Selengut,T. M.    
Science 302:5652, 1967-1969  
2003     (Published)

The Roles of Natural Organic Matter in Chemical and Microbial Reduction of Ferric Iron.    
Chen, J.,B. H. Gu, R. A. Royer, W. D. Burgos    
Science of the Total Environment 307:, 167-178  
2003     (Published)

Effects of contaminant concentration, aging, and soil properties on the bioaccessibility of Cr(III) and Cr(VI) in soil.    
Stewart, M.A., P.M. Jardine, C.C. Brandt, M.O. Barnett, S.E. Fendorf, L.D. McKay, T.L. Mehlhorn, and K. Paul    
Soil & Sediment Contamination 12:1, 21-Jan  
2003     (Published)

Factors controlling the bioaccessibility of arsenic(V) and lead(II) in soil.    
Yang, J.K., M.O. Barnett, P.M. Jardine, and S.C. Brooks    
Soil & Sediment Contamination 12:2, 165-179  
2003     (Published)

Sorption kinetics of Fe(II), Zn(II), Co(II), Ni(II), Cd(II), and Fe(II)/Me(II) onto hematite.    
Jeon, B.H., B.A. Dempsey, W.D. Burgos, R.A. Royer    
Water Research 37:17, 4135-4142  
2003     (Published)

A general paradigm to model reaction-based biogeochemical processes in batch systems.    
Fang, Y.L, G.T. Yeh, W.D. Burgos    
Water Resources Research 39:4,   
2003     (Published)

A particle-based model of size or anion exclusion with application to microbial transport in porous media.    
T. D. Scheibe,B. D. Wood    
Water Resources Research 39:4,   
2003     (Published)

Different strategies for Fe(III) oxide reduction in Geobacter versus Shewanella and Geothrix species.    
D. R. Lovley,K. P. Nevin, S. E. Childers, T. Mehta, S. A. Ciufo    
Abstracts of Papers of the American Chemical Society 223:, U598-U598  
2002     (Published)

Microbial nitrate-dependent oxidation of solid-phase Fe(II).    
E. E. Roden,K. A. Weber    
Abstracts of Papers of the American Chemical Society 223:, U599-U599  
2002     (Published)

Processes in microbial transport in the natural subsurface.    
T. R. Ginn,B. D. Wood, K. E. Nelson, T. D. Scheibe, E. M. Murphy, T. P. Clement    
Advances in Water Resources 25:12-Aug, 1017-1042  
2002     (Published)

The glucomannokinase of the gram-negative ruminal bacterium, Prevotella bryantii B(1)4, and its sequence conservation with regulatory glucokinases of gram-positive bacteria.    
M. W. Fields,J. B. Russell    
Anaerobe 8:2, 69-74  
2002     (Published)

Desulfovibrio sp genes involved in the respiration of sulfate during metabolism of hydrogen and lactate.    
J. L. Steger,C. Vincent, J. D. Ballard, L. R. Krumholz    
Applied and Environmental Microbiology 68:4, 1932-1937  
2002     (Published)

Enrichment of members of the family Geobacteraceae associated with stimulation of dissimilatory metal reduction in uranium-contaminated aquifer sediments.    
D. E. Holmes,K. T. Finneran, R. A. O'Neil, D. R. Lovley    
Applied and Environmental Microbiology 68:5, 2300-2306  
2002     (Published)

Mechanisms for accessing insoluble Fe(III) oxide during dissimilatory Fe(III) reduction by Geothrix fermentans.    
K. P. Nevin,D. R. Lovley    
Applied and Environmental Microbiology 68:5, 2294-2299  
2002     (Published)

Dissimilatory metal reduction: from early life to bioremediation.    
D. R. Lovley    
Asm News 68:5, 231-237  
2002     (Published)

Multiple influences of nitrate on uranium solubility during bioremediation of uranium-contaminated subsurface sediments.    
K. T. Finneran,M. E. Housewright, D. R. Lovley    
Environmental Microbiology 4:9, 510-516  
2002     (Published)

Reduction of Fe(III) oxide by methanogens in the presence and absence of extracellular quinones.    
D. R. Bond,D. R. Lovley    
Environmental Microbiology 4:2, 115-124  
2002     (Published)

Adsorption, sequestration, and bioaccessibility of As(V) in soils.    
Yang, J.K., M.O. Barnett, P.M. Jardine, N.T. Basta, and S.W. Casteel    
Environmental Science & Technology 36:21, 4562-4569  
2002     (Published)

Anaerobic, sulfate-dependent degradation of polycyclic aromatic hydrocarbons in petroleum-contaminated harbor sediment.    
M. M. Rothermich,L. A. Hayes, D. R. Lovley    
Environmental Science & Technology 36:22, 4811-4817  
2002     (Published)

Enhancement of biological reduction of hematite by electron shuttling and Fe(II) complexation.    
R. A. Royer,W. D. Burgos, A. S. Fisher, R. F. Unz, B. A. Dempsey    
Environmental Science & Technology 36:9, 1939-1946  
2002     (Published)

In situ transformation of deuterated toluene and xylene to benzylsuccinic acid analogues in BTEX-contaminated aquifers.    
D. E. Reusser,J. D. Istok, H. R. Beller, J. A. Field    
Environmental Science & Technology 36:19, 4127-4134  
2002     (Published)

Single-well ""push-pull"" partitioning tracer test for NAPL detection in the subsurface.    
J. D. Istok,J. A. Field, M. H. Schroth, B. M. Davis, V. Dwarakanath    
Environmental Science & Technology 36:12, 2708-2716  
2002     (Published)

U(VI) adsorption to heterogeneous subsurface media: Application of a surface complexation model.    
M. O. Barnett,P. M. Jardine, S. C. Brooks    
Environmental Science & Technology 36:5, 937-942  
2002     (Published)

Immobilization of strontium during iron biomineralization coupled to dissimilatory hydrous ferric oxide reduction.    
E. E. Roden,M. R. Leonardo, F. G. Ferris    
Geochimica et Cosmochimica Acta 66:16, 2823-2839  
2002     (Published)

Reactive transport in fractured saprolite: Determining diffusive mass transfer and surface reaction kinetics parameters.    
J. P. Gwo,M. A. Mayes, P. M. Jardine    
Geochimica et Cosmochimica Acta 66:15A, A300-A300  
2002     (Published)

Anaerobic microbial growth from components of cretaceous shales.    
Krumholz, L.R., S.H. Harris, and J.M. Suflita    
Geomicrobiology Journal 19:6, 593-602  
2002     (Published)

Influence of biogenic Fe(II) on bacterial crystalline Fe(III) oxide reduction.    
Roden, E.E. and M.M. Urrutia    
Geomicrobiology Journal 19:2, 209-251  
2002     (Published)

Mechanisms for Fe(III) oxide reduction in sedimentary environments.    
Nevin, K.P. and D.R. Lovley    
Geomicrobiology Journal 19:2, 141-159  
2002     (Published)

Reduction of actinides and fission products by Fe(III)-reducing bacteria.    
Lloyd, J.R., J. Chesnes, S. Glasauer, D.J. Bunker, F.R. Livens, and D.R. Lovley    
Geomicrobiology Journal 19:1, 103-120  
2002     (Published)

Rapid Evolution of Redox Processes in a Petroleum Hydrocarbon-contaminated Aquifer.    
Chapelle, F.H., P.M. Bradley, D.R. Lovley, K. O'Neill, and J.E. Landmeyer    
Ground Water 40:4, 353-360  
2002     (Published)

Biocurtain design using reactive transport models.    
M. S. Phanikumar,D. W. Hyndman, C. S. Criddle    
Ground Water Monitoring and Remediation 22:3, 113-123  
2002     (Published)

Desulfitobacterium metallireducens sp nov., an anaerobic bacterium that couples growth to the reduction of metals and humic acids as well as chlorinated compounds".    
K. T. Finneran,H. M. Forbush, C. V. G. VanPraagh, D. R. Lovley    
International Journal of Systematic and Evolutionary Microbiology 52:, 1929-1935  
2002     (Published)

Geoglobus ahangari gen. nov., sp nov., a novel hyperthermophilic archaeon capable of oxidizing organic acids and growing autotrophically on hydrogen with Fe(III) serving as the sole electron acceptor.    
K. Kashefi,J. M. Tor, D. E. Holmes, C. V. G. Van Praagh, A. L. Reysenbach, D. R. Lovley    
International Journal of Systematic and Evolutionary Microbiology 52:, 719-728  
2002     (Published)

Microarray transcription profiling of a Shewanella oneidensis etrA mutant.    
Beliaev, A.S., D.K. Thompson, M.W. Fields, L.Y. Wu, D.P. Lies, K.H. Nealson, and J.Z. Zhou    
Journal of Bacteriology 184:16, 4612-4616  
2002     (Published)

Influence of hydrological and geochemical processes on the transport of chelated metals and chromate in fractured shale bedrock.    
P. M. Jardine,T. L. Mehlhorn, I. L. Larsen, W. B. Bailey, S. C. Brooks, Y. Roh, J. P. Gwo    
Journal of Contaminant Hydrology 55:2-Jan, 137-159  
2002     (Published)

pH-dependent fate and transport of NTA-complexed cobalt through undisturbed cores of fractured shale saprolite.    
S. C. Brooks,S. L. Carroll    
Journal of Contaminant Hydrology 58:4-Mar, 191-207  
2002     (Published)

Push-pull partitioning tracer tests using radon-222 to quantify non-aqueous phase liquid contamination.    
B. M. Davis,J. D. Istok, L. Semprini    
Journal of Contaminant Hydrology 58:2-Jan, 129-146  
2002     (Published)

Kinetics of microbial Fe(III) oxide reduction in freshwater wetland sediments.    
E. E. Roden,R. G. Wetzel    
Limnology and Oceanography 47:1, 198-211  
2002     (Published)

Specific 16S rDNA sequences associated with naphthalene degradation under sulfate-reducing conditions in harbor sediments.    
L. A. Hayes,D. R. Lovley    
Microbial Ecology 43:1, 134-145  
2002     (Published)

A Hydrogen-based Subsurface Microbial Community Dominated by Methanogens.    
Chapelle, F.H., K. O'Neill, P.M. Bradley, B.A. Methe, S.A. Ciufo, L.L. Knobel, D.R. Lovley    
Nature 415:6869, 312-315  
2002     (Published)

Geobacter metallireducens accesses insoluble Fe(III) oxide by chemotaxis.    
S. E. Childers,S. Ciufo, D. R. Lovley    
Nature 416:6882, 767-769  
2002     (Published)

Potential for bioremediation of uranium-contaminated aquifers with microbial U(VI) reduction.    
Finneran,K.T., R.T. Anderson, K.P. Nevin, and D.R. Lovley    
Soil & Sediment Contamination 11:3, 339-357  
2002     (Published)

Uranyl surface complexes formed on subsurface media from DOE facilities.    
B. C. Bostick,S. Fendorf, M. O. Barnett, P. M. Jardine, S. C. Brooks    
Soil Science Society of America Journal 66:1, 99-108  
2002     (Published)

Simulation of microbial transport and carbon tetrachloride biodegradation in intermittently-fed aquifer columns.    
M. S. Phanikumar,D. W. Hyndman, D. C. Wiggert, M. J. Dybas, M. E. Witt, C. S. Criddle    
Water Resources Research 38:4,   
2002     (Published)

Biogeochemical interactions of uranium and Fe(III) oxides in subsurface environments.    
M. O. Barnett,E. E. Roden, P. M. Jardine, S. C. Brooks    
Abstracts of Papers of the American Chemical Society 222:, U23-U23  
2001     (Published)

Diffusion-limited chromium reduction in soil aggregates.    
T. K. Tokunaga,J. M. Wan, T. C. Hazen, E. Schwartz, M. K. Firestone, S. R. Sutton, M. Newville, K. R. Olson, A. Lanzirotti, W. Rao    
Abstracts of Papers of the American Chemical Society 222:, U490-U490  
2001     (Published)

Hydrologic and geochemical processes controlling the transport of uranium and cesium through the Hanford vadose zone.    
M. A. Mayes, P.M. Jardine, S.E. Fendorf, T.L. Mehlhorn, B.N. Bjornstad    
Abstracts of Papers of the American Chemical Society 222:, U494-U495  
2001     (Published)

In situ anaerobic transformation of trichlorofluoroethene in trichloroethene-contaminated groundwater.    
K. J. Hageman,J. A. Field, J. Istok, L. Semprini, T. E. Buscheck    
Abstracts of Papers of the American Chemical Society 222:, U433-U433  
2001     (Published)

Acetate oxidation coupled to Fe(III) reduction in hyperthermophilic microorganisms.    
J. M. Tor,K. Kashefi, D. R. Lovley    
Applied and Environmental Microbiology 67:3, 1363-1365  
2001     (Published)

Application of the 5 ' fluorogenic exonuclease assay (TaqMan) for quantitative ribosomal DNA and rRNA analysis in sediments.    
J. R. Stults,O. Snoeyenbos-West, B. Methe, D. R. Lovley, D. P. Chandler    
Applied and Environmental Microbiology 67:6, 2781-2789  
2001     (Published)

Development of a genetic system for Geobacter sulfurreducens.    
M. V. Coppi,C. Leang, S. J. Sandler, D. R. Lovley    
Applied and Environmental Microbiology 67:7, 3180-3187  
2001     (Published)

Suboxic deposition of ferric iron by bacteria in opposing gradients of Fe(II) and oxygen at circumneutral pH.    
D. Sobolev,E. E. Roden    
Applied and Environmental Microbiology 67:3, 1328-1334  
2001     (Published)

Trichlorobacter thiogenes should be renamed as a Geobacter species.    
O. Snoeyenbos-West,C. G. Van Praagh, D. R. Lovley    
Applied and Environmental Microbiology 67:2, 1020-1021  
2001     (Published)

Isolation, characterization and gene sequence analysis of a membrane-associated 89 kDa Fe(III) reducing cytochrome c from Geobacter sulfurreducens.    
T. S. Magnuson,N. Isoyama, A. L. Hodges-Myerson, G. Davidson, M. J. Maroney, G. G. Geesey, D. R. Lovley    
Biochemical Journal 359:, 147-152  
2001     (Published)

Microbial detoxification of metals and radionuclides.    
Lloyd, J.R. and D.R. Lovley    
Current Opinion in Biotechnology 12:3, 248-253  
2001     (Published)

Anaerobic degradation of aromatic compounds coupled to Fe(III) reduction by Ferroglobus placidus.    
Tor, J.M. and D.R. Lovley    
Environmental Microbiology 3:4, 281-287  
2001     (Published)

Anaerobic degradation of methyl tert-butyl ether (MTBE) and tert-butyl alcohol (TBA).    
K. T. Finneran,D. R. Lovley    
Environmental Science & Technology 35:9, 1785-1790  
2001     (Published)

Chromium diffusion and reduction in soil aggregates.    
T. K. Tokunaga, J.M. Wan, M.K. Firestone, T.C. Hazen, E. Schwartz, S.R. Sutton, M. Newville    
Environmental Science & Technology 35:15, 3169-3174  
2001     (Published)

In situ anaerobic transformation of trichlorofluoroethene in trichloroethene-contaminated groundwater.    
K. J. Hageman,J. D. Istok, J. A. Field, T. E. Buscheck, L. Semprini    
Environmental Science & Technology 35:9, 1729-1735  
2001     (Published)

Microbially catalyzed nitrate-dependent oxidation of biogenic solid-phase Fe(II) compounds.    
K. A. Weber,F. W. Picardal, E. E. Roden    
Environmental Science & Technology 35:8, 1644-1650  
2001     (Published)

Differences in Fe(III) reduction in the hyperthermophilic archaeon, Pyrobaculum islandicum, versus mesophilic Fe(III)-reducing bacteria.    
S. E. Childers,D. R. Lovley    
FEMS Microbiology Letters 195:2, 253-258  
2001     (Published)

Temperature-dependent oxygen and carbon isotope fractionations of biogenic siderite.    
Zhang, C.L., J. Horita, D.R. Cole, J.Z. Zhou, D.R. Lovley, and T.J. Phelps    
Geochimica et Cosmochimica Acta 65:14, 2257-2271  
2001     (Published)

In situ determination of subsurface microbial enzyme kinetics.    
J. D. Istok,J. A. Field, M. H. Schroth    
Ground Water 39:3, 348-355  
2001     (Published)

Use of quantitative models to design microbial transport experiments in a sandy aquifer.    
T. D. Scheibe,Y. J. Chien, J. S. Radtke    
Ground Water 39:2, 210-222  
2001     (Published)

Geobacter hydrogenophilus, Geobacter chapellei and Geobacter grbiciae, three new, strictly anaerobic, dissimilatory Fe(III)-reducers.    
J. D. Coates,V. K. Bhupathiraju, L. A. Achenbach, M. J. McInerney, D. R. Lovley    
International Journal of Systematic and Evolutionary Microbiology 51:, 581-588  
2001     (Published)

Isolation and characterization of a soluble NADPH-dependent Fe(III) reductase from Geobacter sulfurreducens.    
Kaufmann, F. and D.R. Lovley    
Journal of Bacteriology 183:15, 4468-4476  
2001     (Published)

In-situ oxidation of trichloroethene by permanganate: effects on porous medium hydraulic properties.    
M. H. Schroth,M. Oostrom, T. W. Wietsma, J. D. Istok    
Journal of Contaminant Hydrology 50:2-Jan, 79-98  
2001     (Published)

The mechanism of carbonate killing of Escherichia coli.    
G. N. Jarvis,M. W. Fields, D. A. Adamovich, C. E. Arthurs, J. B. Russell    
Letters in Applied Microbiology 33:3, 196-200  
2001     (Published)

Population dynamics of two toluene degrading bacterial species in a contaminated stream.    
S. T. L. Tay,F. H. Hemond, L. R. Krumholz, C. M. Cavanaugh, M. F. Polz    
Microbial Ecology 41:2, 124-131  
2001     (Published)

The glucomannokinase of Prevotella bryantii B(1)4 and its potential role in regulating beta-glucanase expression.    
Fields, M.W. and J.B. Russell    
Microbiology-UK 147:, 1035-1043  
2001     (Published)

Bioremediation - Anaerobes to the rescue.    
Lovley, D.R.    
Science 293:5534, 1444-1446  
2001     (Published)

Extended tailing of bacteria following breakthrough at the Narrow Channel focus area, Oyster, Virginia".    
Zhang, P.F., W.P. Johnson, T.D. Scheibe, K.H. Choi, F.C. Dobbs, and B.J. Mailloux    
Water Resources Research 37:11, 2687-2698  
2001     (Published)

Chemotaxis pseuomonas fluorecens to 2,4 and 2,6-dinitrotoluene".    
C. M. R. Velazquez,T. C. Hazen    
Abstracts of Papers of the American Chemical Society 219:, U319-U319  
2000     (Published)

Effect of Geobacter species on the fate of metal and organic contaminants in the subsurface.    
Lovley, D.R.    
Abstracts of Papers of the American Chemical Society 220:, U346-U346  
2000     (Published)

Immobilization of aqueous strontium during carbonate mineral formation coupled to microbial Fe(III) oxide reduction.    
Roden, E.E. and F.G. Ferris    
Abstracts of Papers of the American Chemical Society 220:, U347-U347  
2000     (Published)

In situ evaluation of solute retardation using single-well push-pull tests.    
Schroth, M.H., J.D. Istok, and R. Haggerty    
Advances in Water Resources 24:1, 105-117  
2000     (Published)

Bacterial reductive dissolution of crystalline Fe(III) oxide in continuous-flow column reactors.    
E. E. Roden,M. M. Urrutia, C. J. Mann    
Applied and Environmental Microbiology 66:3, 1062-1065  
2000     (Published)

Direct and Fe(II)-mediated reduction of technetium by Fe(III)-reducing bacteria.    
J. R. Lloyd,V. A. Sole, C. V. G. Van Praagh, D. R. Lovley    
Applied and Environmental Microbiology 66:9, 3743-3749  
2000     (Published)

Lack of production of electron-shuttling compounds or solubilization of Fe(III) during reduction of insoluble Fe(III) oxide by Geobacter metallireducens.    
K. P. Nevin,D. R. Lovley    
Applied and Environmental Microbiology 66:5, 2248-2251  
2000     (Published)

Reduction of Fe(III), Mn(IV), and toxic metals at 100 degrees C by Pyrobaculum islandicum.    
K. Kashefi,D. R. Lovley    
Applied and Environmental Microbiology 66:3, 1050-1056  
2000     (Published)

Anaerobic benzene degradation.    
Lovley, D.R.    
Biodegradation 11:3-Feb, 107-116  
2000     (Published)

Reduction of humic substances and Fe(III) by hyperthermophilic microorganisms.    
Lovley, D.R., K. Kashefi, M. Vargas, J.M. Tor, and E.L. Blunt-Harris    
Chemical Geology 169:4-Mar, 289-298  
2000     (Published)

Solid phase capture of strontium by the iron reducing bacteria Shewanella alga strain BrY.    
Parmar, N., L.A. Warren, E.E. Roden, and F.G. Ferris    
Chemical Geology 169:4-Mar, 281-288  
2000     (Published)

N-2-dependent growth and nitrogenase activity in the metal-metabolizing bacteria, Geobacter and Magnetospirillum species.    
D. A. Bazylinski,A. J. Dean, D. Schuler, E. J. P. Phillips, D. R. Lovley    
Environmental Microbiology 2:3, 266-273  
2000     (Published)

Anaerobic bioremediation of benzene under sulfate-reducing conditions in a petroleum-contaminated aquifer.    
R. T. Anderson,D. R. Lovley    
Environmental Science & Technology 34:11, 2261-2266  
2000     (Published)

Performance evaluation of a zerovalent iron reactive barrier: Mineralogical characteristics.    
D. H. Phillips,B. Gu, D. B. Watson, Y. Roh, L. Liang, S. Y. Lee    
Environmental Science & Technology 34:19, 4169-4176  
2000     (Published)

Potential for nonenzymatic reduction of Fe(III) via electron shuttling in subsurface sediments.    
K. P. Nevin,D. R. Lovley    
Environmental Science & Technology 34:12, 2472-2478  
2000     (Published)

Characterization of a membrane-bound NADH-dependent Fe3+ reductase from the dissimilatory Fe3+-reducing bacterium Geobacter sulfurreducens.    
Magnuson, T.S., A.L. Hodges-Myerson, and D.R. Lovley    
FEMS Microbiology Letters 185:2, 205-211  
2000     (Published)

Creation of a subsurface permeable treatment zone for aqueous chromate contamination using in situ redox manipulation.    
J. S. Fruchter,C. R. Cole, M. D. Williams, V. R. Vermeul, J. E. Amonette, J. E. Szecsody, J. D. Istok, M. D. Humphrey    
Ground Water Monitoring and Remediation 20:2, 66-77  
2000     (Published)

Influence of dissimilatory metal reduction on fate of organic and metal contaminants in the subsurface.    
D. R. Lovley,R. T. Anderson    
Hydrogeology Journal 8:1, 77-88  
2000     (Published)

Microbial communities in the deep subsurface.    
L. R. Krumholz    
Hydrogeology Journal 8:1, 10-Apr  
2000     (Published)

Effect of cation exchange on surfactant-enhanced solubilization of trichloroethene.    
J. A. Field,T. E. Sawyer, M. H. Schroth, M. D. Humphrey, J. D. Istok    
Journal of Contaminant Hydrology 46:2-Jan, 131-149  
2000     (Published)

Multispecies Transport of Metal-EDTA Complexes and Chromate through Undisturbed Columns of Weathered Fractured Saprolite.    
Mayes M.A., P.M. Jardine, I.L. Larsen, S.C. Brooks, and S.E. Fendorf    
Journal of Contaminant Hydrology 45:, 243-265  
2000     (Published)

Enrichment of Geobacter species in response to stimulation of Fe(III) reduction in sandy aquifer sediments.    
O. L. Snoeyenbos-West,K. P. Nevin, R. T. Anderson, D. R. Lovley    
Microbial Ecology 39:2, 153-167  
2000     (Published)

Biogeochemistry - Hexadecane decay by methanogenesis.    
R. T. Anderson,D. R. Lovley    
Nature 404:6779, 722-723  
2000     (Published)

Microbes with a mettle for bioremediation.    
Lovley, D.R. and J.R. Lloyd    
Nature Biotechnology 18:6, 600-601  
2000     (Published)

Nitrogen fractions and transformations of vadose zone sediments under intensive agriculture in Oregon.    
Dick, R.P., R.A. Christ, J.D. Istok, and F. Iyamuremye    
Soil Science 165:6, 505-515  
2000     (Published)

Adsorption and transport of uranium(VI) in subsurface media.    
M. O. Barnett,P. M. Jardine, S. C. Brooks, H. M. Selim    
Soil Science Society of America Journal 64:3, 908-917  
2000     (Published)

Evaluating surfactant-enhanced nonaqueous phase (DNAPL) recovery using single-well ""push-pull"" tests.    
J. A. Field,J. D. Istok, M. Schroth, T. E. Sawyer, M. D. Humphrey    
Abstracts of Papers of the American Chemical Society 218:, U1040-U1040  
1999     (Published)

Immobilization of strontium during carbonate mineral formation coupled to microbial reduction of Fe(III) oxide.    
M. R. Leonardo,V. K. Keith, F. G. Ferris, E. E. Roden    
Abstracts of Papers of the American Chemical Society 218:, U1044-U1044  
1999     (Published)

Radon-222 as a Natural Tracer for Monitoring the Remediation of NAPL Contamination in the Subsurface.    
Cantaloub, M.G., A.D. Humphrey, J. Istok, and L. Semprini    
Abstracts of Papers of the American Chemical Society 218:, U1042-U1042  
1999     (Published)

Characterization of two subsurface H-2-utilizing bacteria, Desulfomicrobium hypogeium sp nov and Acetobacterium psammolithicum sp nov., and their ecological roles".    
L. R. Krumholz,S. H. Harris, S. T. Tay, J. M. Suflita    
Applied and Environmental Microbiology 65:6, 2300-2306  
1999     (Published)

Estimation of methanogen biomass by quantitation of coenzyme M.    
D. A. Elias,L. R. Krumholz, R. S. Tanner, J. M. Suflita    
Applied and Environmental Microbiology 65:12, 5541-5545  
1999     (Published)

Role of humic-bound iron as an electron transfer agent in dissimilatory Fe(III) reduction.    
D. R. Lovley,E. L. Blunt-Harris    
Applied and Environmental Microbiology 65:9, 4252-4254  
1999     (Published)

Humics as an electron donor for anaerobic respiration.    
Lovley, D.R., J.L. Fraga, J.D. Coates, and E.L. Blunt-Harris    
Environmental Microbiology 1:1, 89-98  
1999     (Published)

Fate and transport of hexavalent chromium in undisturbed heterogeneous soil.    
P. M. Jardine,S. E. Fendorf, M. A. Mayes, I. L. Larsen, S. C. Brooks, W. B. Bailey    
Environmental Science & Technology 33:17, 2939-2944  
1999     (Published)

Ferrous iron removal promotes microbial reduction of crystalline iron(III) oxides.    
E. E. Roden,M. M. Urrutia    
Environmental Science & Technology 33:11, 1847-1853  
1999     (Published)

Influence of aqueous and solid-phase Fe(II) complexants on microbial reduction of crystalline iron(III) oxides.    
M. M. Urrutia,E. E. Roden, J. M. Zachara    
Environmental Science & Technology 33:22, 4022-4028  
1999     (Published)

Sorption of strontium by bacteria, Fe(III) oxide, and bacteria-Fe(III) oxide composites.    
T. D. Small,L. A. Warren, E. E. Roden, F. G. Ferris    
Environmental Science & Technology 33:24, 4465-4470  
1999     (Published)

Sustained bacterial reduction of Co(III)EDTA(-) in the presence of competing geochemical oxidation during dynamic flow.    
S. C. Brooks,S. L. Carroll, P. M. Jardine    
Environmental Science & Technology 33:17, 3002-3011  
1999     (Published)

Pyrolusite surface transformations measured in real-time during the reactive transport of Co(II)EDTA(2-).    
S. Fendorf,P. M. Jardine, R. R. Patterson, D. L. Taylor, S. C. Brooks    
Geochimica et Cosmochimica Acta 63:19-20, 3049-3057  
1999     (Published)

In situ redox manipulation by dithionite injection: Intermediate-scale laboratory experiments.    
J. D. Istok,J. E. Amonette, C. R. Cole, J. S. Fruchter, M. D. Humphrey, J. E. Szecsody, S. S. Teel, V. R. Vermeul, M. D. Williams, S. B. Yabusaki    
Ground Water 37:6, 884-889  
1999     (Published)

Laboratory and field investigation of surfactant sorption using single-well, ""push-pull"" tests".    
J. D. Istok,J. A. Field, M. H. Schroth, T. E. Sawyer, M. D. Humphrey    
Ground Water 37:4, 589-598  
1999     (Published)

Laboratory investigation of surfactant-enhanced trichloroethene solubilization using single-well, ""push-pull"" tests.    
J. A. Field,J. D. Istok, M. H. Schroth, T. E. Sawyer, M. D. Humphrey    
Ground Water 37:4, 581-588  
1999     (Published)

Geothrix fermentans gen. nov., sp nov., a novel Fe(III)-reducing bacterium from a hydrocarbon-contaminated aquifer.    
J. D. Coates,D. J. Ellis, C. V. Gaw, D. R. Lovley    
International Journal of Systematic Bacteriology 49:, 1615-1622  
1999     (Published)

The periplasmic 9.6-kilodalton c-type cytochrome of Geobacter sulfurreducens is not an electron shuttle to Fe(III).    
Lloyd, J.R., E.L. Blunt-Harris, and D.R. Lovley    
Journal of Bacteriology 181:24, 7647-7649  
1999     (Published)

Role of prior exposure on anaerobic degradation of naphthalene and phenanthrene in marine harbor sediments.    
L. A. Hayes,K. P. Nevin, D. R. Lovley    
Organic Geochemistry 30:8B, 937-945  
1999     (Published)

Importance of Xanthobacter autotrophicus in toluene biodegradation within a contaminated stream.    
S. T. L. Tay,H. F. Hemond, M. F. Polz, C. M. Cavanaugh, L. R. Krumholz    
Systematic and Applied Microbiology 22:1, 113-118  
1999     (Published)

Scaling of flow and transport behavior in heterogeneous groundwater systems.    
T. Scheibe,S. Yabusaki    
Advances in Water Resources 22:3, 223-238  
1998     (Published)

Carbohydrate oxidation coupled to Fe(III) reduction, a novel form of anaerobic metabolism".    
J. D. Coates,T. Councell, D. J. Ellis, D. R. Lovley    
Anaerobe 4:6, 277-282  
1998     (Published)

Two new Mycobacterium strains and their role in toluene degradation in a contaminated stream.    
S. T. L. Tay,H. F. Hemond, M. F. Polz, C. M. Cavanaugh, I. Dejesus, L. R. Krumholz    
Applied and Environmental Microbiology 64:5, 1715-1720  
1998     (Published)

Rate and extent of cobalt sorption to representative aquifer minerals in the presence of a moderately strong organic ligand.    
Brooks, S.C. and J.S. Herman    
Applied Geochemistry 13:1, 77-88  
1998     (Published)

Evaluation of biodegradation potential of foam embedded Burkholderia cepacia G4.    
J. C. Radway,J. W. Santo Domingo, T. C. Hazen, E. W. Wilde    
Biotechnology Letters 20:7, 663-666  
1998     (Published)

Spatial variability in in situ aerobic respiration and denitrification rates in a petroleum-contaminated aquifer.    
M. H. Schroth,J. D. Istok, G. T. Conner, M. R. Hyman, R. Haggerty, K. T. O'Reilly    
Ground Water 36:6, 924-937  
1998     (Published)

Biodegradation of cobalt-citrate complexes: Implications for cobalt mobility in groundwater.    
S. C. Brooks,J. S. Herman, G. M. Hornberger, A. L. Mills    
Journal of Contaminant Hydrology 32:, 99-115  
1998     (Published)

Anaerobic aquifer transformations of 2,4-dinitrophenol under different terminal electron accepting conditions".    
L. R. Krumholz,J. M. Suflita    
Anaerobe 3:6, 399-403  
1997     (Published)

Ecofunctional enzymes of microbial communities in ground water.    
C. B. Fliermans,M. M. Franck, T. C. Hazen, R. W. Gorden    
FEMS Microbiology Reviews 20:4-Mar, 379-389  
1997     (Published)

Desulfuromonas chloroethenica sp. nov. uses tetrachloroethylene and trichloroethylene as electron acceptors.    
L. R. Krumholz    
International Journal of Systematic Bacteriology 47:4, 1262-1263  
1997     (Published)

Use of conventional methods and whole cell hybridization to monitor the microbial response to triethylphosphate.    
J. W. SantoDomingo, C.J. Berry, T.C. Hazen    
Journal of Microbiological Methods 29:3, 145-151  
1997     (Published)

Use of sedimentological information for geometric simulation of natural porous media structure.    
T. D. Scheibe,D. L. Freyberg    
Water Resources Research 31:12, 3259-3270  
1995     (Published)