HIV molecular immunology database
Download T-Helper/CD4+ epitope summary as CSV or XLS files.
This is a list of all HIV T-Helper/CD4+ epitopes mapped to within a region of 21 amino acids or less. The protein, HXB2 location, host species, and HLA restriction elements of the epitopes are provided. Identical entries are shown only once. The epitope sequence is a link to the database that will provide details of all epitopes containing that sequence.
| Epitope | Protein | HXB2 location | Subtype | Species | HLA |
|---|---|---|---|---|---|
MGARASVLSGGELDRWEK |
p17 | 1-18 | B | human | |
ASILRGGKLDKW |
p17 | 5-16 | C | human | |
VLSGGELDRWE |
p17 | 7-17 | macaque | ||
SGGELDRWEKIRLRPGGK |
p17 | 9-26 | B | human | |
GGKLDAWEKIRLRPG |
p17 | 10-24 | human | ||
LDRWEKIRLRP |
p17 | 13-23 | macaque | ||
EKIRLRPGGKKKYKL |
p17 | 17-31 | B | human | |
EKIRLRPGGKKKYKLKHI |
p17 | 17-34 | B | human | |
EKIRLRPGGKKKYKLHKI |
p17 | 17-34 | B | human | |
RLRPGGKKHYM |
p17 | 20-30 | C | human | |
LRPGGKKKYKLKHIV |
p17 | 21-35 | human | DR13.02 | |
RPGGKKKY? |
p17 | 22-29 | B | human | |
GKKKYKLKHIVWASREL |
p17 | 25-41 | human | ||
GKKHYMLKHLVWASREL |
p17 | 25-41 | C | human | |
HYMLKHLVWAS |
p17 | 28-38 | C | human | |
YKLKHIVWASRELER |
p17 | 29-43 | B | human | |
KHIVWASRELERFAV |
p17 | 32-46 | B | human | |
HIVWASRELERFAVN |
p17 | 33-47 | B | human | |
HIVWASRELERFAVN? |
p17 | 33-47 | human | ||
ASRELERFAVNPGLL |
p17 | 37-51 | B | human, transgenic mouse | DRB*0101, DRB1*0101, DRB1*0401, DRB1*0405, DRB1*0701, DRB1*1302, DRB1*1501 |
ASRELERFALNPGLL |
p17 | 37-51 | C | human | |
SRELERFALNPSLLEE |
p17 | 38-53 | human | ||
RELERFAVN |
p17 | 39-47 | B | human | DRB1*1302 |
LERFAVNPGLL |
p17 | 41-51 | B | human | DRB1*1302 |
LERFAVNPGLLETSE |
p17 | 41-55 | B | human, transgenic mouse | DRB1*0101 |
ERFAVNPGLL |
p17 | 42-51 | B | human | DRB3*0202, DRB3*0301 |
ERFALNPSLLETAEG |
p17 | 42-56 | human | ||
ERFAVNPGLLETSEGCR |
p17 | 42-58 | B | human | DRB1*0101, DRB1*0405, DRB1*1101, DRB1*1302 |
ERFALNPGLLETSEGGK |
p17 | 42-58 | C | human | |
PGLLETSEGCK |
p17 | 48-58 | C | human | |
GLLETSEGCRQILGQL |
p17 | 49-64 | human | ||
EGCRQILGQLQPSLQTGS |
p17 | 55-72 | human | ||
TGSEELRSLYNTVATLY |
p17 | 70-86 | B | human | |
TSEELKSLFVTVATL |
p17 | 71-85 | human | ||
EELRSLYNTVA |
p17 | 73-83 | macaque | ||
EELRSLYNTVATLYC |
p17 | 73-87 | B | human, transgenic mouse | DRB1*0101 |
LKSLFNTVATLYCVH |
p17 | 75-89 | human | ||
SLYNTVATLYCVHQR |
p17 | 77-91 | B | human, transgenic mouse | DRB1*0101 |
SLYNTVATLYCVHQRIEV |
p17 | 77-94 | B | human | DRB1*0101, DRB1*0401, DRB1*0405, DRB1*0701, DRB1*1302, DRB5*0101 |
TVATLYCVHQRIEVK |
p17 | 81-95 | B | transgenic mouse | DRB1*0101 |
VATLYCVHAGI |
p17 | 82-92 | C | human | |
LYCVHQRIEVKDTKE |
p17 | 85-99 | B | transgenic mouse | DRB1*0101 |
EIKDTKEALDKIEEE |
p17 | 93-107 | human | ||
AAADTGHSSQVSQNY |
p17 | 118-132 | human | ||
SQVSQNYPIVQNLQGQMV |
p17-p24 | 126-11 | human | ||
PIVQNIQGQ |
p24 | 1-9 | B | human | DRB1*0101 |
PIVQNLQGQMV |
p24 | 1-11 | human | DR1 | |
PIVQNIQGQMVHQAI |
p24 | 1-15 | human | ||
QGQMVHQAISPRTLN |
p24 | 7-21 | human, mouse, transgenic mouse | DR, DR supermotif, I-Ab | |
QMVHQAISPRTLNAWVKV |
p24 | 9-26 | B, C | human | |
VHQAISPRTLNAWVKC |
p24 | 11-26 | human | ||
PRTLNAWVKVVEEKAF |
p24 | 17-32 | human | ||
NAWVKVVEEKAFSPE |
p24 | 21-35 | B | mouse | H-2d |
NAWVKVVEEKAFSPEC |
p24 | 21-36 | human | ||
AWVKVIEEKAFSPEV |
p24 | 22-36 | human | ||
WVKVVEEKAFSPEVIPMF |
p24 | 23-40 | B | human | |
WKVVEEKAFSPEVIPMF |
p24 | 23-40 | B | human | |
KVVEEKAFSPEVIPM |
p24 | 25-39 | human | ||
EEKAFSPEV |
p24 | 28-36 | B | human | DRB1*0101 |
EEKAFSPEVIP |
p24 | 28-38 | B | human | DQ5 |
EKAFSPEVIPMFSAL |
p24 | 29-43 | B | transgenic mouse | DRB1*0101 |
AFSPEVIPMFT |
p24 | 31-41 | C | human | |
AFSPEVIPMFSALSEC |
p24 | 31-46 | human | ||
AFSPEVIPMFSALSEGA |
p24 | 31-47 | B | human | |
AFSPEVIPMFTALSEGA |
p24 | 31-47 | C | human | |
AFSPEVIPMFSALSEGAT |
p24 | 31-48 | B | human | |
SPEVIPMFSALSEGA |
p24 | 33-47 | B | transgenic mouse | DRB1*0101 |
PEVIPMFSALSEGATP |
p24 | 34-49 | B | human | DR1 |
EVIPMFSALS |
p24 | 35-44 | B | human | DR4, DRB1*0101 |
IPMFSALSEGATPQD |
p24 | 37-51 | B | transgenic mouse | DRB1*0101 |
PMFTALSEGAT |
p24 | 38-48 | C | human | |
SALSEGATPQDLNTMC |
p24 | 41-56 | human | ||
TPQDLNTMLNTVGGH |
p24 | 48-62 | human | ||
PQDLNTMLNTVGGHQ |
p24 | 49-63 | B | human | |
PQDLNMMLNIVGGHQA |
p24 | 49-64 | human | ||
DLNTMLNTYGGHQAAC |
p24 | 51-66 | human | ||
NTMLNTVGGHQAAM |
p24 | 53-66 | C | human | |
GGHQAAMQMLKDTINEEA |
p24 | 60-77 | C | human | |
AMQMLKETINEEAAE |
p24 | 65-79 | human | ||
AMQMKLETINEEAAE |
p24 | 65-79 | human | ||
ETINEEAAEWDRVHPC |
p24 | 71-86 | B | human | |
ETINEEAAEWDRVHPVHA |
p24 | 71-88 | B | human | DRB1*0101 |
INEEAAEWDRL |
p24 | 73-83 | C | human | |
INEEAAEWDRV |
p24 | 73-83 | macaque | ||
EAAEWDRVHP |
p24 | 76-85 | human | ||
EAAEWDRVHPVHAGP |
p24 | 76-90 | human | ||
AAEWDRLHPVHAGPIA |
p24 | 77-92 | human | ||
EWDRVHPVHA |
p24 | 79-88 | B | human | DRB1*0101 |
DRVHPVHAGPIAPGQ |
p24 | 81-95 | macaque | ||
RLHPVHAGPIA |
p24 | 82-92 | C | human | |
LHPVHAGPIAPGQMREPR |
p24 | 83-100 | C | human | |
PVHGPIAPGQMREP |
p24 | 85-99 | human | ||
VHAGPIAPG |
p24 | 86-94 | B | human | DQ7 |
HAGPIAPGQMREPRG |
p24 | 87-101 | mouse | H-2b | |
IAPGQMREPRGSDIA |
p24 | 91-105 | human | ||
PGQMREPRGSDIAGT |
p24 | 93-107 | human | ||
GQMREPRGSDI |
p24 | 94-104 | C | human | |
MREPRGSD |
p24 | 96-103 | B | human | |
MREPRGSKIAGTTST |
p24 | 96-110 | human | ||
REPRGSDIAGTTSTL |
p24 | 97-111 | human | ||
EPRGSDIAGT |
p24 | 98-107 | B | human | DQ7 |
GSDIAGTTSTLQEQI |
p24 | 101-115 | B | human, macaque, transgenic mouse | DRB1*0101 |
GSDIAGTTSTLQEQIC |
p24 | 101-116 | human | ||
GTTSTLQEQIA |
p24 | 106-116 | C | human | |
STLQEQIGWMTNNPP |
p24 | 109-123 | B | human, transgenic mouse | DRB1*0101 |
STLQEQIGWMTNNPPIPV |
p24 | 109-126 | human | ||
EQIGWMTNNPPIPVG |
p24 | 113-127 | B | transgenic mouse | DRB1*0101 |
EQIAWMTSNPPVPVG |
p24 | 113-127 | C | human | |
WMTSNPPVPVG |
p24 | 117-127 | C | human | |
WMTNNPPIPVGEIYK |
p24 | 117-131 | B | transgenic mouse | DRB1*0101 |
TNNPPIPBGEIYKRW |
p24 | 119-133 | B | human | DRB1*1301 |
NPPIPVGEIYKRWII |
p24 | 121-135 | B | transgenic mouse | DRB1*0101 |
NPPIPVGEIYKRWIIC |
p24 | 121-136 | human | ||
PVGEIYKRWIILGLN |
p24 | 125-139 | B | human, mouse, transgenic mouse | DRB1*0101, H-2d |
PVGDIYKRWIILGLNKIV |
p24 | 125-142 | C | human | |
PVGEIYKRWIILGLNKIV |
p24 | 125-142 | human | ||
GEIYKRWIILGLNKI |
p24 | 127-141 | human, transgenic mouse | DR, DR supermotif | |
GEIYRWIILGLNKI |
p24 | 127-141 | human | DR supermotif | |
EIYRWIILG |
p24 | 128-137 | human | DRB1*1301, DRB1*1302 | |
EIYKRWIILG |
p24 | 128-137 | human | DRB1*1301, DRB1*1302 | |
IYKRWIILGLNKIVR |
p24 | 129-143 | B | human, transgenic mouse | DRB1*0101 |
KRWIILGLNKIVRMY |
p24 | 131-145 | B | human, macaque, transgenic mouse | DR, DR supermotif, DR1 |
WIILGLNKIVR |
p24 | 133-143 | macaque | ||
WIILGLNKIVRM |
p24 | 133-144 | B | human | DRB1*0101, DRB1*0401, DRB1*0405, DRB1*1101, DRB1*1302, DRB1*1501, DRB5*0101 |
WIILGLNKIVRMYSP |
p24 | 133-147 | B | human, transgenic mouse | DRB1*0101 |
WIILGLNKIVRMYSPTSI |
p24 | 133-150 | B | human | DRB1*0101, DRB1*0401, DRB1*0405, DRB1*0701, DRB1*1101, DRB1*1302, DRB1*1501, DRB5*0101 |
WILLGLNKIVRMYSPTSI |
p24 | 133-150 | B | human | DRB1*0101, DRB1*0401, DRB1*0405, DRB1*0701, DRB1*1101, DRB1*1302, DRB1*1501, DRB5*0101 |
WIILGLNKIVRMYSPVSI |
p24 | 133-150 | C | baboon, human | |
ILGLNKIVRMY |
p24 | 135-145 | B | human | DRB1*0401, DRB1*1302, DRB1*1501 |
GLNKIVRMYSPTSIL |
p24 | 137-151 | B | human, transgenic mouse | DRB1*0101 |
LNKIVRMYSPVSILD |
p24 | 138-152 | human | ||
NKIVRMYSPT |
p24 | 139-148 | AG | macaque | |
KIVRMYSPT |
p24 | 140-148 | B | human | DRB1*0101 |
KIVRMYSPTS |
p24 | 140-149 | human | DR4 | |
IVRMYSPTSILDIRQ |
p24 | 141-155 | B | transgenic mouse | DRB1*0101 |
IVRMYSPTSILDIRQC |
p24 | 141-156 | human | ||
IVRMYSPTSILDIRQGPK |
p24 | 141-158 | B | human | |
YSPTSILDIRQGPKE |
p24 | 145-159 | B | transgenic mouse | DRB1*0101 |
SPTSILDIRQGPKEP |
p24 | 146-160 | human | ||
SILDIRQGPKEPFRD |
p24 | 149-163 | B | transgenic mouse | DRB1*0101 |
SILDIRQGPKEPFRDYV |
p24 | 149-165 | human | ||
LDIRQGPKEPFRDYVC |
p24 | 151-166 | human | ||
IRQGPKEPFRDYVDR |
p24 | 153-167 | human | ||
GPKEPFRDYVDRFYK |
p24 | 156-170 | human | ||
GPKEPFRDYVDRFYKTLR |
p24 | 156-173 | B | human | |
PKEPFRDYV |
p24 | 157-165 | B | human | DQ5 |
FRDYVDRFFKT |
p24 | 161-171 | C | human | |
FRDYVDRFYKTLRAE |
p24 | 161-175 | human | DQA1*01/DQB1*05 | |
DYVDRFYKTLRAE |
p24 | 163-175 | human | DR0101 | |
DYVDRFYKTLRAEQA |
p24 | 163-177 | human | DRB1*1302 | |
YVDRFYKTLRAEQASQEV |
p24 | 164-181 | B | human | DRB1*0101, DRB1*0401, DRB1*0405, DRB1*0701, DRB1*1101, DRB1*1302, DRB1*1501, DRB5*0101 |
YVDRFFKTLRAEQATQDV |
p24 | 164-181 | B, C | human | |
VDRFYKTLRAEQASQ |
p24 | 165-179 | B | human, mouse, transgenic mouse | DRB1*0101, H-2d |
DRFFKTLRAEQAT |
p24 | 166-178 | human | ||
DRFFKTLRAEQATQE |
p24 | 166-180 | human | ||
RFYKTLRAEQAS |
p24 | 167-178 | B | human | DRB1*0101, DRB1*0401, DRB1*0405, DRB1*0701, DRB1*1101, DRB1*1501, DRB5*0101 |
FYKTLRAEQASQ |
p24 | 168-179 | B | human | DRB1*0101, DRB1*0401, DRB1*1101, DRB5*0101 |
FYKTLRAEQASQE |
p24 | 168-180 | B | human | DRB1*0101, DRB1*0401, DRB1*0405, DRB1*1101, DRB1*1501, DRB5*0101 |
FFKTLRAEQATQE |
p24 | 168-180 | human | ||
YKTLRAEQA |
p24 | 169-177 | B | human | DRB1*0101 |
YKTLRAEQAS |
p24 | 169-178 | AG | macaque | |
YKTLRAEQASQ |
p24 | 169-179 | macaque | ||
YKTLRAEQASQEVKN |
p24 | 169-183 | B | human, transgenic mouse | DRB1*0101 |
LRAEQASQEVKNWMTETL |
p24 | 172-189 | human | ||
RAEQASQEVKNWMTE |
p24 | 173-187 | B | human, transgenic mouse | DRB1*0101 |
DVKNWMTDTLLQNA |
p24 | 180-194 | C | human | |
VKNWMTETLLVQNAN |
p24 | 181-195 | B | transgenic mouse | DRB1*0101 |
VKNWMTETLLVQNANC |
p24 | 181-198 | human | ||
MTETLLVQNANPDCKTIL |
p24 | 185-202 | B | human | |
MTDTLLQNANPDCKTIL |
p24 | 185-202 | C | human | |
LLVQNANPDCKTILR |
p24 | 189-203 | C | human | |
NANPDCKTILKALGPAA |
p24 | 193-209 | human | ||
ILKALGPAATLEEMM |
p24 | 201-215 | B | human | |
LGPAATLEEMMTACQ |
p24 | 205-219 | B | human | |
ACQGVGGPGHKARVLAEA |
p24-p2p7p1p6 | 217-3 | human | ||
GHKARVLAEAMSQVTNSA |
p24-p2p7p1p6 | 225-11 | human | ||
EAMSQVTNSATIMMQR |
p2p7p1p6 | 2-17 | human | ||
TNSATIMMQRGNFRNQRK |
p2p7p1p6 | 8-25 | B | human | |
QRGNFRNQRKTVKCF |
p2p7p1p6 | 16-30 | B | human | |
RNQRKTVKCFNCGKEGHI |
p2p7p1p6 | 21-38 | human | ||
NQRKIVKCFNC |
p2p7p1p6 | 22-32 | macaque | ||
VKCFNCGKGEH |
p2p7p1p6 | 27-37 | C | human | |
FNCGKEGHTARNCRA |
p2p7p1p6 | 30-44 | human | ||
HIAKNCRAPRKKGCWK |
p2p7p1p6 | 37-52 | B | human | |
RAPRKKGCWKCGKEGHQM |
p2p7p1p6 | 43-60 | B | human | |
KEGHQMKDCTERQAN |
p2p7p1p6 | 55-69 | human | ||
MKDCTERQANFLGKI |
p2p7p1p6 | 60-74 | human | ||
DCTERQANFLG |
p2p7p1p6 | 62-72 | C | human | |
RQANFLGKIWPSHKGR |
p2p7p1p6 | 66-81 | B | human | DRB1*0101, DRB1*0401, DRB1*0405, DRB1*1101, DRB1*1302, DRB1*1501, DRB5*0101 |
GKIWPSHKGRPGNFLQSR |
p2p7p1p6 | 72-89 | B, C | human | |
PSYKGRPG |
p2p7p1p6 | 76-83 | B | human | |
GRPGNFLQSRPEPTA |
p2p7p1p6 | 80-94 | human | ||
GNFLQSRPEPTAPPA |
p2p7p1p6 | 83-97 | mouse | H-2b | |
FLQSRPEPTAPPEESFRF |
p2p7p1p6 | 85-102 | human | ||
REETTTPS |
p2p7p1p6 | 89-96 | B | human | |
ESFRSGVETTTPPQK |
p2p7p1p6 | 98-112 | human | ||
GEETTTPSQKQEPIDKEL |
p2p7p1p6 | 103-120 | B | human | |
FEETTPAPPKQ |
p2p7p1p6 | 104-113 | C | human | |
TTTPPQKQEPI |
p2p7p1p6 | 106-116 | macaque | ||
QKQEPIDKELYPLASLR |
p2p7p1p6 | 111-127 | B | human | |
EPIDKELYPLASLRS |
p2p7p1p6 | 114-128 | human | ||
KDREPLTSLKS |
p2p7p1p6 | 118-128 | C | human | |
FIKVRQYDQIPIEICGKK |
Protease | 53-70 | C | human | |
PVNIIGRNLLTQIGC |
Protease | 81-95 | mouse, transgenic mouse | ||
EICTEMEKEGKISKIGP |
RT | 36-52 | human | ||
CTEMEKEGKISKIGP |
RT | 38-52 | mouse | H-2k | |
TEMEKEGKISKIGPE |
RT | 39-53 | human | ||
ITKIGPENPYNTPIFAIK |
RT | 47-64 | C | baboon | |
SKIGPENPYNTPVFA |
RT | 48-62 | mouse | H-2k | |
FAIKKKDSTKWR |
RT | 61-72 | B | mouse | |
AIKKKDSTKWRKLVDF |
RT | 62-77 | mouse | H-2k | |
WEVQLGIPHPAGLKK |
RT | 88-102 | mouse | H-2t4 | |
FRKYTAFTIPSINNE |
RT | 124-138 | human, mouse, transgenic mouse | DR, DR supermotif, I-Ab | |
PSINNETPGIRYQYN |
RT | 133-147 | mouse | H-2i5, H-2k | |
YQYNVLPQGWKGSPA |
RT | 144-158 | mouse | H-2t4 | |
SPAIFQSSMTKILEP |
RT | 156-170 | human, mouse, transgenic mouse | DR, DR supermotif, I-Ab | |
SPAIFQCSSMTKILEP |
RT | 156-170 | human | DR supermotif | |
MTKILEPFRKQNPDIVIY |
RT | 164-181 | B | human | |
VIYQYMDDL |
RT | 179-187 | B | mouse | |
IGQHRTKIEELRQHL |
RT | 195-209 | human | ||
RTHLLRWGLTTP |
RT | 206-217 | B | mouse | |
GLTTPDKKNNN |
RT | 213-223 | B | mouse | |
KDSWTVNDIQKLVGK |
RT | 249-263 | human, transgenic mouse | DR, DR5, DR5(11.01) | |
KDSSTVNDIQKLVGK |
RT | 249-263 | B | human | DRS |
KDSWTWNDIQKLVGK |
RT | 249-263 | human | ||
SSTVNDIQKLV |
RT | 251-261 | human | DR5(11.01) | |
QKLWGKLNWASQIYP |
RT | 258-272 | human | ||
WRQLCKLLRGTKALT |
RT | 276-290 | human | ||
GTKALTEVIPLTEEA |
RT | 285-299 | human | ||
PLTEEAELELAENRE |
RT | 294-308 | human | ||
LAENREILKEPVHGV |
RT | 303-317 | human | ||
TYQIYQEPFKNLKTG |
RT | 338-352 | B | human | DP4 |
GKTPKFKLPIQKETW |
RT | 384-398 | human | ||
WEFVNTPPLVKLWYQ |
RT | 414-428 | human | DR supermotif | |
LEKEPIVGAETFYVD |
RT | 429-443 | human | ||
AETFYVDGAANRETK |
RT | 437-451 | transgenic mouse | DR | |
TDTTNQKTELQAIYLQL |
RT | 470-486 | B | mouse | |
IKKEKVYLAWVPAHK |
RT | 526-540 | B | mouse | H-2 Ad, H-2Dd |
KEKVYLAWVPAHK |
RT | 528-540 | mouse | H-2b, H-2d, H-2k | |
KEKVYLAWVPAHKG |
RT | 528-541 | B | mouse | H-2 Ad, H-2Dd |
KEKVYLAWVPAHKGIG |
RT | 528-543 | mouse | H-2d, H-2f, H-2k | |
EKVYLAWVPAHKGIG |
RT | 529-543 | human, mouse, transgenic mouse | DR, DR supermotif, I-Ab | |
KVYLAWVPAHKGIGG |
RT | 530-544 | human, transgenic mouse | DR, DR supermotif | |
SAGIRKVLFLD |
RT-Integrase | 553-3 | B | human | |
HSNWRAMASDFNLPP |
Integrase | 16-30 | human | DR supermotif | |
LKTAVQMAVFIHNFK |
Integrase | 172-186 | B | human | |
KTAVQMAVFIHNFKR |
Integrase | 173-187 | human, transgenic mouse | DR, DR supermotif | |
KTAVQMAVFFIHNFKR |
Integrase | 173-187 | human | DR supermotif | |
RKGGIGGYSAGERIVDII |
Integrase | 187-204 | B | human | |
SAGERIVDIIATDIQTK |
Integrase | 195-211 | B | human | |
AGERIVDIIATDIQT |
Integrase | 196-210 | B | human | |
TEKLQKQITKIQNFRVYY |
Integrase | 210-227 | B | human | DR supermotif |
ELKKIIGQVRDQAEHLK |
Integrase | 210-227 | B | human | |
QKQITKIQNFRVYYR |
Integrase | 214-228 | human, transgenic mouse | DR, DR supermotif | |
KQITKIQNFRVYY |
Integrase | 215-227 | B | human | |
LWKGEGAVVIQDNSDIKV |
Integrase | 242-259 | B | human | |
VIQDNSDIKVVPRRKAKI |
Integrase | 250-267 | B | human | |
VITTYWGLHTGE |
Vif | 65-76 | human | ||
LGQGVSIEWRKQRYST |
Vif | 81-96 | human | ||
RHFPRIWLHGLGQHI |
Vpr | 32-46 | B | human | |
PRIWLHGLGQHIYET |
Vpr | 35-49 | B | human | DRB5 |
ETYGDTWAGVEAIIR |
Vpr | 48-62 | B | human | DRB5 |
DTWAGVEAIIRILQQ |
Vpr | 52-66 | B | human | DR11, DRB5 |
LQQLLFIHFRIGCRHS |
Vpr | 64-79 | B | human | DR11 |
QLLFIHFRIGCRHSR |
Vpr | 66-80 | human, mouse | H-2d | |
IHFRIGCRHSRIGVT |
Vpr | 70-84 | B | human | DR11, DR3, DRB5 |
SRIGILRQRRARNGASRS |
Vpr | 79-96 | C | human | |
QPKTACTNCYCKKCCF |
Tat | 17-32 | B | human | DR5? plus others |
QPKTACTNCYCKRCCF |
Tat | 17-32 | human | ||
HCQVCFITKALGISYG |
Tat | 33-48 | human | DR5? plus others | |
HCQVCFMTKGLGISYG |
Tat | 33-48 | human | ||
VCFITKALGISYGRK? |
Tat | 36-50 | B | mouse | H-2d |
KGLGISYGRK? |
Tat | 41-50 | C | mouse | |
KALGISYGRKKRRQR |
Tat | 41-55 | B | human | DR11, DR13, DR3, DRB5 |
RRAHQNSQTHQASLS? |
Tat | 56-70 | B | mouse | H-2d |
HQASLSKQPTSQPRGD |
Tat | 65-80 | B | human | DR2? plus others |
DEELIRTVRLIKLLY |
Rev | 9-23 | B | human | |
KTVRLIKFLYQSNPPPS |
Rev | 14-30 | B | human | |
SNPPPNPEGTRQARR |
Rev | 25-39 | B | human | |
GTRQARRNRRRRWRER |
Rev | 33-48 | B | human | |
RRRRWRERQRQIHSIS |
Rev | 41-56 | B | human | |
AIVVWSIVLIEYRKIL |
Vpu | 19-34 | human | ||
YRKILRQRKIDRLID |
Vpu | 30-44 | transgenic mouse | DR | |
TEKLWVTVYYGVPVW |
gp160 | 31-45 | B | human | DP4 |
VGLNWVTVYYGVPVWKEA |
gp160 | 31-48 | C | human | |
EQLWVTVYYGVPV |
gp160 | 32-44 | mouse | H-2bxk | |
KLWVTVYYGVPVWKE |
gp160 | 33-47 | B | human | |
WVTVYYGVPVWKGAT |
gp160 | 35-49 | C | human | |
VYYGVPVWKEA |
gp160 | 38-48 | chimpanzee, human, macaque, mouse | H-2bxk, H-2sxd | |
GVPVWKEATTLFC |
gp160 | 41-54 | macaque, mouse | H-2sxd | |
REAKTTLFCASDAKAYDR |
gp160 | 46-63 | C | baboon | |
GATTTLFCASDAKAY |
gp160 | 47-61 | C | human | |
TTLFCASKAKAYDTE |
gp160 | 50-64 | C | human | |
AHKVWATHACV |
gp160 | 65-75 | mouse | H-2bxk, H-2sxd | |
THACVPADPNPQEMV |
gp160 | 71-85 | C | human | |
CVPTNPVPQEVV |
gp160 | 74-85 | mouse | H-2bxk, H-2sxd | |
CVPTDPNPQEVV |
gp160 | 74-85 | B | human | |
ENVTENFNMWKNEMV |
gp160 | 87-101 | C | human | |
ENFNMWKNEMVNQMQ |
gp160 | 91-105 | C | human | |
YFNMWKNNMV |
gp160 | 92-101 | human | ||
EMVNQMQEDVISLWD |
gp160 | 99-113 | C | human | |
EQMHEDIISLWDQ |
gp160 | 102-114 | mouse | H-2bxk | |
EQMHEDIISLWDQSL |
gp160 | 102-116 | mouse | H-2b, H-2d, H-2i5 | |
HEDIISLWDQSLK |
gp160 | 105-117 | B, C | human, macaque, mouse | H-2k |
IISLWDQSLKPC |
gp160 | 108-119 | B | human | |
SLWDQSLKPCVKLTPL |
gp160 | 110-125 | human | ||
LWDQSLKPCVKLT |
gp160 | 111-123 | macaque | ||
SLKPCVKLTPLC |
gp160 | 115-126 | B | human | |
SLKPCVKLTPLCVSL |
gp160 | 115-129 | B | human | DR |
CVKLTPLCVTLECRN |
gp160 | 119-133 | C | human | |
KNCSFNISTSIRGKV |
gp160 | 155-169 | B | human | DR |
KNCSFNITTELIDKK |
gp160 | 155-169 | mouse | H-2 IAb | |
NCSFNATTVVRDRDQ |
gp160 | 156-170 | C | human | |
NATTVVRDRKQTVYA |
gp160 | 160-174 | C | human | |
VYALFYRLDIVPLTK |
gp160 | 172-186 | C | human | |
LFYKLDVVQIDNSTN |
gp160 | 175-189 | mouse | H-2 IAb | |
FYRLDIVPLTKNYS |
gp160 | 176-189 | C | human | |
INCNTSAITQACPKV |
gp160 | 194-208 | C | human | |
TSVITQACPKVSFEP |
gp160 | 198-212 | mouse | H-2 IAb | |
TSVITQACPKVSFEPIPI |
gp160 | 198-215 | mouse | H-2 IAb | |
SVITQACSKVSFE |
gp160 | 199-211 | chimpanzee, human, macaque, mouse | H-2bxk, H-2sxd | |
VITQACPKVSFEPIP |
gp160 | 200-214 | B | human | DR |
ITQACPKVSFEP |
gp160 | 201-212 | mouse | H-2 IAb | |
ITQACPKVSFEPIPI |
gp160 | 201-215 | A, B, C, D | mouse | |
PKVSFEPIPIHYCAP |
gp160 | 206-220 | A, B, C, D | mouse | H-2 IAb, H-2b |
PKVTFDPIPIHYCTP |
gp160 | 206-220 | C | human | |
KVSFDPIPIHYCAPAGYA |
gp160 | 207-224 | C | baboon | |
ITFEPIPIHYC |
gp160 | 208-218 | mouse | H-2 IAb | |
ITFEPIPIHYCAPAG |
gp160 | 208-222 | B, D | mouse | H-2 IAb |
SFEPIPIHYCAP |
gp160 | 209-220 | B | human | DR |
FEPIPIHYC |
gp160 | 210-218 | B | mouse | |
FEPIPIHYCAFPGF |
gp160 | 210-223 | mouse | H-2bxk | |
FDPIPIHYCTPAGYA |
gp160 | 210-224 | C | human | |
EPIPIHYCAPAGFAI |
gp160 | 211-225 | B, D | mouse | |
PIHYCAP |
gp160 | 214-220 | mouse | H-2 IAb | |
PIHYCAPAGFAILK |
gp160 | 214-227 | human | ||
IHYCAPAGFAI |
gp160 | 215-225 | mouse | H-2 IAb | |
HYCAPAGFAI |
gp160 | 216-225 | mouse | H-2 IAb | |
PAGFAILKCNNKTFN |
gp160 | 220-234 | human | ||
PAGFAILKCNNKTFNY |
gp160 | 220-235 | B | human | DR2 |
FAILKCNNK |
gp160 | 223-231 | B | human, mouse | DR2, DR6, H-2d |
NKTFNGKGPCTNVSTY |
gp160 | 230-245 | human | ||
GTGPCTNVSTVQC |
gp160 | 235-247 | macaque | ||
TNVSTVQCTHGRPIY |
gp160 | 240-255 | human | ||
GIRPIVSTQLLLNGSC |
gp160 | 250-265 | human | ||
RPVVSTQLLLNGSLA |
gp160 | 252-266 | B | human | |
EVVIRSANFTDNAKT |
gp160 | 269-283 | human | ||
VVIRSDNFTNNAKTIC |
gp160 | 270-285 | human | ||
IRSENITNNAKTIIV |
gp160 | 272-286 | A | human | |
SANFTDNAKTIIVQL |
gp160 | 274-288 | human | ||
NAKTIIVQLNESVAIC |
gp160 | 280-296 | human | ||
NESVAINCT |
gp160 | 289-297 | human | ||
SVVEINCTRPNNNTRKS |
gp160 | 290-306 | B | human | |
CTRPNNNTRKSI |
gp160 | 296-307 | |||
RPYNNTRKGI |
gp160 | 298-307 | mouse | H-2 IAb | |
NTRKSIRIQRGPGR |
gp160 | 302-315 | mouse | ||
(CKR)KIHIGPGQAFYT |
gp160 | 303-319 | C | mouse | H-2b, H-2d, H-2k, H-2s |
RIHIGPGRAFYTTK |
gp160 | 308-321 | mouse | H-2d | |
RIQRGPGRAFVTIGK |
gp160 | 308-322 | B, C | human, macaque, mouse | DR, H-2 Ad, H-2 I-Ad |
RIQRGPRAFVTIGK |
gp160 | 308-322 | mouse | H-2d | |
RIHIGPGRAFYTTKN |
gp160 | 308-322 | B, C | human | |
EQRGPGRAFVTIGKI |
gp160 | 309-323 | human | ||
IQRGPGRAFVTIGKIGN |
gp160 | 309-325 | human | ||
RGPGRAFVT |
gp160 | 311-319 | B | mouse | |
RGPGPAFVTI |
gp160 | 311-320 | mouse | H-2d | |
RGPGRAFVTIGK |
gp160 | 311-322 | mouse | H-2d | |
GRAFVTIGKIGNMRQ |
gp160 | 314-328 | human | ||
RAYYTTNIVGNIRQ |
gp160 | 315-328 | mouse | H-2 IAb | |
FVTIGKIGNMRQAHC |
gp160 | 317-331 | mouse | H-2d, H-2k | |
TGDIIGDIRQAHCNI |
gp160 | 319-333 | C | human | |
GIIGDIRQAHCHVSR |
gp160 | 321-335 | A | human | |
RIIGDIRKAHCNISRY |
gp160 | 321-336 | human | ||
IIGDIRQAHCNISRE |
gp160 | 322-336 | A, B, C, D | mouse | H-2 IAb |
IVGNIRQAHCNVSKA |
gp160 | 322-336 | mouse | H-2 IAb | |
GNIRQAHCNVSKA |
gp160 | 324-336 | mouse | H-2 IAb | |
GNIRQAHCNVSKAKW |
gp160 | 324-338 | B, D | mouse | H-2 IAb, H-2b |
RQAHCNISRAKWNNT |
gp160 | 327-341 | B | mouse | I-Ad |
CNISRAQWNNTLEQI |
gp160 | 331-345 | human | ||
RAKWNNTLKQIDSKL |
gp160 | 335-349 | mouse | H-2b, H-2k, H-2s | |
RAKWNNTLKQICSKL |
gp160 | 335-349 | mouse | H-2i5, H-2k, H-2t4 | |
TLEQIVKKLREQFGNC |
gp160 | 341-356 | human | ||
QIVKKLREQFGNNK |
gp160 | 344-357 | human | ||
FGNNKTII |
gp160 | 353-360 | macaque | ||
QSSGGDPEIV |
gp160 | 363-372 | B | human | |
SSGGKPEIVTHSFNC |
gp160 | 364-378 | human | ||
PEIVTHSFNCGGEFF |
gp160 | 369-383 | human | ||
GEFFYCNSTQLFNS? |
gp160 | 380-393 | B | human | |
EFFYCNTTQLFNNTW |
gp160 | 381-395 | human | ||
TQLFNSTWFNSTWST |
gp160 | 388-402 | B | human | DP4 |
FNNTWRLNHTEGTKGC |
gp160 | 391-405 | human | ||
TWFNSTWSTKGSNNT |
gp160 | 394-408 | human | ||
TWSTKGSNNTEGSDT |
gp160 | 399-413 | human | ||
GSNNTVGNPIILPCRI |
gp160 | 404-420 | A, B, C, D | human | |
SNNTVGNPIILPCRI |
gp160 | 405-420 | B | mouse | H-2 IAb, H-2b |
SSSIITIPCRIKQII |
gp160 | 410-424 | C | human | |
ITIPCRIKQIINMWQ |
gp160 | 414-428 | C | human | |
LPCRIKQIINMWQEVY |
gp160 | 416-431 | human | ||
CRIKQIINMWQEVGR |
gp160 | 418-432 | C | human | |
RIKQIINMWQKVGKA |
gp160 | 419-433 | B | human | |
KQIINMWQKVGQAMY |
gp160 | 421-435 | A | human | |
KQIINMWQEVGKAMYA |
gp160 | 421-436 | B, C | chimpanzee, goat, human, mouse | DR, DRB1*13, H-2d, H-2k, H-2s, H-2t4, H-2Eα Eβ k, H-2Ek |
KQFINMWQEWGKAMYA |
gp160 | 421-436 | human | ||
FINMWQEVGKAMYAPPIS |
gp160 | 423-440 | human | ||
INMWQEVGKAMYAPP |
gp160 | 424-438 | human | ||
NMWQEVGKAMYAPPI |
gp160 | 425-439 | mouse | H-2s, H-2t4 | |
MWQEVGKAMYAPPIGC |
gp160 | 426-441 | human | ||
VGKAMYAPPISGQIR |
gp160 | 430-444 | mouse | H-2b, H-2d, H-2i5, H-2k, H-2s, H-2t4 | |
VGRAMYAPPIKGNIT |
gp160 | 430-444 | C | human | |
AMYAPPIAGLIQCSS |
gp160 | 433-447 | D | mouse | H-2 IAb, H-2b |
MYAPPIKGNITCKSN |
gp160 | 434-448 | C | human | |
APPIGGQISCSSNITY |
gp160 | 436-451 | human | ||
PPISGQIRCS |
gp160 | 437-446 | human | ||
PIKGNITCKSNITGL |
gp160 | 438-452 | C | human | |
IGGQIRCSSN |
gp160 | 439-448 | human | ||
SSNITGLLLTRDGGTC |
gp160 | 446-461 | human | ||
RDGGTNVTNDTEVFRC |
gp160 | 456-470 | human | ||
GNSNNESEIFRPGGG |
gp160 | 459-473 | human | ||
ETFRPGGGDMRNNWR |
gp160 | 466-480 | C | human | |
FRPGGGDMRDNWRSEL |
gp160 | 468-483 | human | ||
DMRDNWRSELYKYKV |
gp160 | 474-488 | human | ||
RDNWRSELYKYKVVK |
gp160 | 476-490 | mouse | H-2d, H-2k, H-2s, H-2t4 | |
ELYKYKVVEIKPLGV |
gp160 | 482-496 | C | human | |
YKYKVVKIEPLGV |
gp160 | 484-496 | B | macaque | DR*W201 |
YKYKVVKIEPLGVAP |
gp160 | 484-498 | human | ||
CKYKVVKIEPLGVAPT |
gp160 | 484-499 | mouse | H-2d, H-2i5, H-2k, H-2t4 | |
KYKVVKIEPLGVAPT |
gp160 | 485-499 | mouse | H-2b, H-2d, H-2k, H-2s | |
KYKVIKIEPLGIAPTC |
gp160 | 485-500 | human | ||
YKVVKIEPL |
gp160 | 486-494 | macaque | DRB*W201 | |
YKVVEIKPLGVAPTT |
gp160 | 486-500 | C | human | |
TKAKRRVVEREKR |
gp160 | 499-511 | human | DR | |
GIVQQQNNLLRAIEA |
gp160 | 547-561 | human | ||
QQHLLQLTVWGIKQL |
gp160 | 562-576 | human | ||
LTVWGIKQLQARVLA |
gp160 | 568-582 | A | human | |
LQARILAVERYLKDQQ |
gp160 | 576-591 | mouse | H-2b, H-2d | |
YLRDQQLLGIWG |
gp160 | 586-597 | chimpanzee, human | ||
YLRDQQLLGIWGC |
gp160 | 586-598 | macaque, mouse | ||
LKDQQLLGLWGCSGKLI |
gp160 | 587-603 | C | baboon | |
LGLWGCSGKLIC |
gp160 | 593-604 | mouse | H-2d | |
LGIWGCSGKLIC |
gp160 | 593-604 | human | ||
GIWGCSGKLI |
gp160 | 594-603 | human | ||
GIWGCSGKLIC |
gp160 | 594-604 | human | ||
CSGKLICTTAVP |
gp160 | 598-609 | B | human | |
CTTAVPWNASWS |
gp160 | 604-615 | B | human | |
TNVPWNASWSNKSLE |
gp160 | 606-620 | B | mouse | H-2 IAb |
PWNASWSN |
gp160 | 609-616 | human | ||
NASWSNKSLE |
gp160 | 611-620 | mouse | H-2 IAb | |
WSNKSLEDIWDNMTWC |
gp160 | 614-629 | human | ||
EQIWNHTTWMEWDRE |
gp160 | 620-634 | B | human | DP4 |
EIDNYTNTIYTLLEEC |
gp160 | 634-649 | human | ||
EESQNQQEKNEQELL |
gp160 | 647-661 | human | ||
QNQQEKNEQELLE |
gp160 | 650-662 | B | human | |
LELDKWASLWNWFNITNW |
gp160 | 661-678 | B | human | |
ASLWNWFNITNWLWY |
gp160 | 667-681 | human | ||
IKLFIMIVGGLVGLR |
gp160 | 682-696 | human | ||
AVLSIVNRVRQGYSPLSF |
gp160 | 700-717 | B | human | |
GIEEEGGERDRDR |
gp160 | 732-744 | B | human | |
RIVELLGRRGWEALK |
gp160 | 780-794 | mouse | H-2d, H-2k, H-2s, H-2t4 | |
KYWWNLLQYWSQELK |
gp160 | 794-808 | mouse | H-2d, H-2k, H-2s | |
LLQYWSQELKNSAVS |
gp160 | 799-813 | mouse | H-2d, H-2k, H-2s, H-2t4 | |
WLNATAIAVTEGTDRC |
gp160 | 814-829 | human | ||
AVAEGTDRVIEVVQG |
gp160 | 821-835 | mouse | H-2b, H-2k, H-2s | |
YVAEGTDRVIEVVQGACR |
gp160 | 821-838 | human | ||
DRVIEVVQG |
gp160 | 827-835 | mouse | H-2k | |
DRVIEVVQGAYRAIR |
gp160 | 827-841 | B | human, macaque, mouse | H-2b, H-2i5, H-2k |
DRVIEVVGQAYRAIR |
gp160 | 827-841 | C | human | |
VIEVVQGAYRAIRHI |
gp160 | 829-843 | mouse | H-2b, H-2k | |
QGAYRAIR |
gp160 | 834-841 | mouse | H-2i5 | |
QGAYRAIRHIPRRIR |
gp160 | 834-848 | mouse | H-2b, H-2d, H-2i5, H-2k, H-2s, H-2t4 | |
AIRHIPRRIR |
gp160 | 839-848 | mouse | H-2d, H-2t4 | |
AIRHIPRRIRQGLER |
gp160 | 839-853 | human, mouse | H-2b, H-2d, H-2k, H-2s, H-2t4 | |
HIPRRIRQGLERILL |
gp160 | 842-856 | human | ||
RSVVGWPAVRERMRRA |
Nef | 8-23 | B | human | |
SAIRERMRR |
Nef | 14-22 | B | human | DRw6 |
PAVRERMRRAEPAADGV |
Nef | 14-30 | B | human | |
RRAEPAADGVGAVSRDL |
Nef | 21-37 | B | human | |
LEKHGAITSSNTAAT |
Nef | 37-51 | human | ||
ITSSNTA |
Nef | 43-49 | B | human | DQw7 |
SSNTAATNAACAWLE |
Nef | 45-59 | human | ||
AWLEAQEEEEVGF |
Nef | 56-68 | human, mouse, transgenic mouse | DQ, DQ2, DQ3, DQ5, DQ6, DQ7, DQ8 | |
EEVGFPVRPQ |
Nef | 64-73 | B | human | DRw15(2) |
EVGFPVIPQVPLRPM |
Nef | 65-79 | human | ||
VGFPVRPQ |
Nef | 66-73 | B | human | DR1, DRw15(2) |
QVPLRPMTYKAAVDLSHF |
Nef | 73-90 | B | human | |
FKGAFDLSFFLKEKGGL |
Nef | 81-97 | C | human | |
YKAAVDLSHFLKEKGGL |
Nef | 81-97 | B | human | |
EGLIHSQRRQDILDL |
Nef | 98-112 | chimpanzee | ||
QKRQDILDLWVYHTQGYF |
Nef | 104-121 | B | human | |
LWVYHTQGYFPDWQNY |
Nef | 112-127 | B | human | |
LWVYHTGQGYFPDWQNYT |
Nef | 112-128 | B | human | |
NSLLHPMSLHGMDDPEK |
Nef | 162-178 | B | human | |
PEKEVLVWKFDSRLAFHH |
Nef | 176-193 | B | human | DRB1*0101, DRB1*0401, DRB1*0701, DRB1*1101, DRB1*1302, DRB1*1501, DRB5*0101 |
LVWRFDSK |
Nef | 181-188 | B | human | DP5 |
KFDSRLAFHHMARELH |
Nef | 184-199 | B | human | DRB1*0101, DRB1*0701, DRB1*1101, DRB1*1501, DRB5*0101 |
FDSRLAFHHVARELHP |
Nef | 185-200 | human | ||
LAFHHVARELHPEYF |
Nef | 189-203 | human | ||
AFHHMARELHPEYYKDC |
Nef | 190-206 | B | human | |
FHHMARELH |
Nef | 191-199 | B | human | DR1 |