HCV Database
HCV sequence database
 
Housekeeping
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Retrieving data
Search interface Advanced search Geography Alignments Known Genotypes Flaviviruses HCV variability External datasets Genome sequencing
Analysis
Entropy Findmodel HCVAlign HCV BLAST Highlighter N-Glycosite PCOORD PhyML SNAP TreeMaker PhyloPlace VESPA
Tools
BranchLength CodonAlign Consensus ElimDupes Format Converter Gap strip/squeeze Gene Cutter MotifScan PepMap PeptGen Pixel Protein Feature
Accent QuickAlign SeqPublish Sequence Locator SynchAligns Translate
Links
Immunology DB Database software Conferences Web resources HIV databases HFV database


Core


Total variability in group
Entropy, synonymous, nonsynonymous changes per codon
Genotype 1
135 sequences
(see subtypes)

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Genotype 2
35 sequences
(see subtypes)

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Genotype 3
18 sequences
(see subtypes)

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Genotype 4
12 sequences

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Genotype 5
5 sequences
(see subtypes)

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Genotype 6
22 sequences

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