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Cancer Type

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Acute Myeloid Leukemia
Adrenocortical carcinoma
Bladder Urothelial Carcinoma
Brain Lower Grade Glioma
Breast invasive carcinoma
Cervical squamous cell carcinoma and endocervical adenocarcinoma
Chronic Lymphocytic Leukemia
Chronic Myelogenous Leukemia
Colon adenocarcinoma
Controls
Esophageal carcinoma
Glioblastoma multiforme
Head and Neck squamous cell carcinoma
Kidney Chromophobe
Kidney renal clear cell carcinoma
Kidney renal papillary cell carcinoma
Liver hepatocellular carcinoma
Lung adenocarcinoma
Lung squamous cell carcinoma
Lymphoid Neoplasm Diffuse Large B-cell Lymphoma
Mesothelioma
Miscellaneous
Ovarian serous cystadenocarcinoma
Pancreatic adenocarcinoma
Pheochromocytoma and Paraganglioma
Prostate adenocarcinoma
Rectum adenocarcinoma
Sarcoma
Skin Cutaneous Melanoma
Stomach adenocarcinoma
Thyroid carcinoma
Uterine Carcinosarcoma
Uterine Corpus Endometrioid Carcinoma

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Baylor College of Medicine (CGCC)
Baylor College of Medicine (GSC)
Broad Institute of MIT and Harvard (GSC)
Broad Institute of MIT and Harvard (GDAC)
Broad Institute of MIT and Harvard (CGCC)
Canada's Michael Smith Genome Sciences Centre (CGCC)
Combined GSCs (GSC)
Harvard Medical School (CGCC)
HudsonAlpha Institute for Biotechnology (CGCC)
Institute for Systems Biology (GDAC)
International Genomics Consortium (BCR)
International Genomics Consortium (CGCC)
Johns Hopkins / University of Southern California (CGCC)
Lawrence Berkeley National Laboratory (CGCC)
Lawrence Berkeley National Laboratory (GDAC)
MD Anderson (CGCC)
MD Anderson (GDAC)
Memorial Sloan-Kettering Cancer Center (CGCC)
Memorial Sloan-Kettering Cancer Center (GDAC)
Nationwide Children's Hospital (BCR)
Nationwide Children's Hospital (CGCC)
Pacific Northwest National Lab (CGCC)
Rubicon Genomics (COM)
The Johns Hopkins University (CGCC)
University of California, Santa Cruz (GDAC)
University of California, Santa Cruz (GSC)
University of North Carolina (CGCC)
University of Southern California (CGCC)
Vanderbilt University Proteomics (CGCC)
Washington University School of Medicine (CGCC)
Washington University School of Medicine (BCR)
Washington University School of Medicine (GSC)

All
ABI SOLiD DNA System Sequencing
Affymetrix Genome-Wide Human SNP Array 6.0
Affymetrix HT Human Genome U133 Array Plate Set
Affymetrix Human Exon 1.0 ST Array
Affymetrix Human Genome U133 Plus 2.0 Array
Agilent 244K Custom Gene Expression G4502A-07
Agilent 244K Custom Gene Expression G4502A-07-1
Agilent 244K Custom Gene Expression G4502A-07-2
Agilent 244K Custom Gene Expression G4502A-07-3
Agilent 8 x 15K Human miRNA-specific microarray
Agilent Human Genome CGH Custom Microarray 2x415K
Agilent Human Genome CGH Microarray 244A
Agilent Human miRNA Microarray Rel12.0
Agilent SurePrint G3 Human CGH Microarray Kit 1x1M
Applied Biosystems Sequence data
Diagnostic Images
Firehose Analyses
Firehose Reports
Firehose Standardized Data
Illumina 550K Infinium HumanHap550 SNP Chip
Illumina DNA Methylation OMA002 Cancer Panel I
Illumina DNA Methylation OMA003 Cancer Panel I
Illumina Genome Analyzer DNA Sequencing
Illumina Genome Analyzer RNA Sequencing
Illumina Genome Analyzer RNA Sequencing Version 2 analysis
Illumina Genome Analyzer mRNA Digital Gene Expression
Illumina Genome Analyzer miRNA Sequencing
Illumina HiSeq 2000 DNA Sequencing
Illumina HiSeq 2000 RNA Sequencing
Illumina HiSeq 2000 RNA Sequencing Version 2 analysis
Illumina HiSeq 2000 mRNA Digital Gene Expression
Illumina HiSeq 2000 miRNA Sequencing
Illumina HiSeq for Copy Number Variation
Illumina Human1M-Duo BeadChip
Illumina Infinium Human DNA Methylation 27
Illumina Infinium Human DNA Methylation 450
M.D. Anderson Reverse Phase Protein Array Core
Microsatellite Instability Analysis
Pathology Reports

All
Annotations
BAM-file Relationship
Complete Clinical Set
Copy Number Results
DNA Methylation
Expression-Exon
Expression-Genes
Expression-Protein
Expression-miRNA
Firehose Reports
Fragment Analysis Results
GCC Reports
Low Pass DNA Sequencing
Minimal Clinical Set
Quantification-Exon
Quantification-Gene
Quantification-Junction
Quantification-miRNA
Quantification-miRNA Isoform
RNA Sequence-Variants
RNA Structural-Variants
RNASeq
RNASeqV2
Raw Sequence
Reports
SNP
Short-Read Relationship
Somatic Mutations
Tissue Slide Images
Trace-Sample Relationship
analyses
miRNA Sequence-Variants
miRNASeq
stddata

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