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1
Bichromophoric rhodamine-iridium(III) sensory system: modulation of the energy-transfer process through a selective sensing behavior.
2011-05-20

A newly designed bichromophoric rhodamine-iridium(III) system was found to show color/electronic absorption spectral changes and modulation of the energy-transfer process from rhodamine 6G to the iridium(III) luminophore upon selective Hg(II) ion binding. PMID:21598991

PubMed

2
Identification of procollagen promoter DNA-binding proteins: effects of dexamethasone
1987-05-01

Glucocorticoids selectively decrease procollagen synthesis by decreasing procollagen mRNA transcription. Dexamethasone coordinately decreased total cellular type I and type III procollagen mRNAs in mouse embryonic skin fibroblasts. Since sequence specific DNA-binding proteins are known to modulate eukaryotic gene expression the authors ...

Energy Citations Database

3
Mechanisms of ZnII-Activated Magnetic Resonance Imaging Agents
2008-10-18

We report on the mechanism of a series of ZnII-activated magnetic resonance contrast agents that modulate the access of water to a paramagnetic GdIII ion to create an increase in relaxivity upon binding of ZnII. In the absence and presence of ...

PubMed Central

4
Fibroblast growth factor-2 binding to the thrombospondin-1 type III repeats, a novel antiangiogenic domain.
2007-10-09

Thrombospondin-1, an antiangiogenic matricellular protein, binds with high affinity to the angiogenic fibroblast growth factor-2, affecting its bioavailability and activity. The present work aimed at further locating the fibroblast growth factor-2 binding site of thrombospondin-1 and investigating its activity, using recombinant thrombospondin-1 proteins. ...

PubMed

5
FIBROBLAST GROWTH FACTOR-2 BINDING TO THE THROMBOSPONDIN-1 TYPE III REPEATS, A NOVEL ANTIANGIOGENIC DOMAIN
2007-10-09

Thrombospondin-1, an antiangiogenic matricellular protein, binds with high affinity to the angiogenic fibroblast growth factor-2, affecting its bioavailability and activity. The present work aimed at further locating the fibroblast growth factor-2 binding site of thrombospondin-1 and investigating its activity, using recombinant thrombospondin-1 proteins. ...

PubMed Central

6
The G-Quadruplex Ligand Telomestatin Impairs Binding of Topoisomerase III? to G-Quadruplex-Forming Oligonucleotides and Uncaps Telomeres in ALT Cells
2009-09-09

In Alternative Lengthening of Telomeres (ALT) cell lines, specific nuclear bodies called APBs (ALT-associated PML bodies) concentrate telomeric DNA, shelterin components and recombination factors associated with telomere recombination. Topoisomerase III? (Topo III) is an essential telomeric-associated factor in ALT cells. We show here that the ...

PubMed Central

7
The actin-binding interface of a myosin III is phosphorylated in vivo in response to signals from a circadian clock.
2007-11-09

Class III unconventional myosins are critical for the normal function of auditory hair cells and the function and maintenance of photoreceptors; however, the roles of class III myosins in these sensory cells are unknown. Class III myosins are unique in that they have a kinase domain at their N-terminus; thus, they may have both ...

PubMed

8
Identification of the Tissue Inhibitor of Metalloproteinases-2 (TIMP-2) Binding Site on the Hemopexin Carboxyl Domain of

. Notably, single alanine substitutions at Lys547 and Lys617 reduced TIMP-2 binding by an order of mag module III as a striking feature. These largely result from contiguous stretches of lysine residues, Lys547 -Asn-Lys-Lys550 and Lys566 -Lys-Lys568 , located near the antiparallel -strand turns at the rim

E-print Network

9
Interstitial collagens I, III, and VI sequester and modulate the multifunctional cytokine oncostatin M.
2001-11-15

The binding of certain growth factors and cytokines to components of the extracellular matrix can regulate their local availability and modulate their biological activities. We show that oncostatin M (OSM), a profibrogenic cytokine and modulator of cancer cell proliferation, specifically binds to collagen types I, ...

PubMed

10
Modulation of glycosaminoglycan production and antithrombin III binding by cultured aortic endothelial cells treated with 4-methylumbelliferyl-beta-D-xyloside
1987-11-01

The interaction between antithrombin III and heparinlike glycosaminoglycan molecules present on the vascular surface seems to play a significant role in the regulation of coagulation. We have tested the hypothesis that altered synthesis of glycosaminoglycans by endothelial cells could influence this interaction by using 4-methylumbelliferyl-beta-D-xyloside for metabolic ...

Energy Citations Database

11
Regulation of lactose permease activity by the phosphoenolpyruvate:sugar phosphotransferase system: evidence for direct binding of the glucose-specific enzyme III to the lactose permease.
1982-03-01

Interaction between the glucose-specific enzyme III (enzyme IIIglc) of the phosphoenolpyruvate:sugar phosphotransferase system and the lactose permease was studied with membrane fragments from an Escherichia coli strain that overproduces the lactose permease. Substrates of the permease markedly and specifically stimulated binding of enzyme IIIglc to the ...

PubMed Central

12
The roles of the C-terminal domain and type III domains of chitinase A1 from Bacillus circulans WL-12 in chitin degradation.
1994-08-01

The mature form of chitinase A1 from Bacillus circulans WL-12 comprises a C-terminal domain, two type III modules (domains), and a large N-terminal domain which contains the catalytic site of the enzyme. In order to better define the roles of these chitinase domains in chitin degradation, modified chiA genes encoding various deletions of chitinase A1 were ...

PubMed Central

13
Antithrombin III binds to human platelets
1980-12-16

The receptor site for antithrombin III (AT III) was investigated in normal human platelets. (/sup 125/I) iodinated AT III was utilized as tracer for the binding assay. Equilibrium of AT III binding was reached within 2 min. The binding capacity was ...

Energy Citations Database

14
Histidine-rich glycoprotein does not interfere with interactions between antithrombin III and heparin-like compounds on vascular endothelial cells
1989-01-01

The role of histidine-rich glycoprotein in controlling heparin-like compounds on the endothelial cell surface is still unclear. The effects of this heparin-neutralizing protein on the interaction between antithrombin III and cultured porcine aortic endothelial cells were examined. Displacement of /sup 125/I-labeled antithrombin III specifically bound to ...

Energy Citations Database

15
Lectin-induced modulation of the antibody response to type III pneumococcal polysaccharide.
1984-01-01

Several lectins were tested for their capacity to alter the antibody response to type III pneumococcal polysaccharide (SSS-III). The antibody response was enhanced by concanavalin A (Con A), phytohemagglutinin (PHA), as well as lectins from Phytolacca americana (Pa-2), Pisum sativum (PSA), and Lens culinaris (LCH), when these lectins were given 2 days ...

PubMed

16
A pyrophosphate-responsive gadolinium(III) MRI contrast agent.
2010-12-07

This study shows that the relaxivity and optical properties of functionalised lanthanide-DTPA-bis-amide complexes (lanthanide=Gd(3+) and Eu(3+) , DTPA=diethylene triamine pentaacetic acid) can be successfully modulated by addition of specific anions, without direct Ln(3+) /anion coordination. Zinc(II)-dipicolylamine moieties, which are known to bind ...

PubMed

17
A Pyrophosphate-Responsive Gadolinium(III) MRI Contrast Agent.
2010-12-01

This study shows that the relaxivity and optical properties of functionalised lanthanide-DTPA-bis-amide complexes (lanthanide=Gd(3+) and Eu(3+), DTPA=diethylene triamine pentaacetic acid) can be successfully modulated by addition of specific anions, without direct Ln(3+)/anion coordination. Zinc(II)-dipicolylamine moieties, which are known to bind strongly ...

PubMed

18
Autoradiographic localisation of substance P (NK1) receptors in human primary visual cortex.
1998-06-01

This study utilised autoradiography to examine [125I]-Bolton Hunter substance P (BHSP) binding in postmortem human visual cortex. In the primary visual area, layers I-III, IVC and VI exhibited low levels of BHSP binding, while high levels were observed in layers IVB and V. Because cells in layers IVB and V are known to be involved in ...

PubMed

19
Structure of estradiol metal chelate and estrogen receptor complex: The basis for designing a new class of selective estrogen receptor modulators
2011-04-19

Selective estrogen receptor modulators, such as estradiol 17?-derived metal complexes, have been synthesized as targeted probes for the diagnosis and treatment of breast cancer. Here, we report the detailed 3D structure of estrogen receptor alpha ligand-binding domain (ER?-LBD) bound with a novel estradiol-derived metal complex, estradiol-pyridine tetra ...

PubMed Central

20
Evidence for a direct manganese-oxygen ligand in water binding to the S2 state of the photosynthetic water oxidation complex.
2004-02-01

The interaction of water with the water oxidizing Mn complex of photosystem II has been investigated using electron spin-echo envelope modulation spectroscopy in the presence of H(2)(17)O. The spectra show interaction of the (17)O with the preparation in the S(2) state induced by 200 K illumination. The modulation is observed only in the center of the ...

PubMed

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21
Salt modulates the stability and lipid binding affinity of the adipocyte lipid-binding proteins
2003-01-01

Adipocyte lipid-binding protein (ALBP or aP2) is an intracellular fatty acid-binding protein that is

NASA Technical Reports Server (NTRS)

22
A peptide motif from the second fibronectin module of the neural cell adhesion molecule, NCAM, NLIKQDDGGSPIRHY, is a binding site for the FGF receptor.
2008-03-27

The mechanism of fibroblast growth factor receptor (FGFR) activation by the neural cell adhesion molecule (NCAM) is not well understood. A motif in the second NCAM fibronectin type III (FN3) module, termed FGL, has by means of nuclear magnetic resonance (NMR) and surface plasmon resonance (SPR) analyses been demonstrated to be involved in NCAM-FGFR ...

PubMed

23
Channeling Studies of III-V/III-V and IV/III-V Semiconductor ...
1983-06-01

... Accession Number : ADA133738. Title : Channeling Studies of III-V/III-V and IV/III-V Semiconductor Modulated Structures,. ...

DTIC Science & Technology

24
A novel fibronectin type III module binding motif identified on C-terminus of Leptospira immunoglobulin-like protein, LigB
2009-08-21

Infection by pathogenic strains of Leptospira hinges on the pathogen�s ability to adhere to host cells via extracellular matrix such as fibronectin (Fn). Previously, the immunoglobulin-like domains of Leptospira Lig proteins were recognized as adhesins binding to N-terminal domain (NTD) and gelatin binding domain (GBD) of Fn. In this study, we identified ...

PubMed Central

25
The TFIIF-like Rpc37/53 dimer lies at the center of a protein network to connect TFIIIC, Bdp1, and the RNA polymerase III active center.
2011-05-02

Eukaryotic RNA polymerase III (Pol III) relies on a transcription factor TFIIF-like Rpc37/53 subcomplex for promoter opening, elongation, termination, and reinitiation. By incorporating the photoreactive amino acid p-benzoyl-L-phenylalanine (BPA) into Rpc37, Rpc53, and the Rpc2 subunit of Pol III, we mapped protein-protein ...

PubMed

26
Genes encoding components of the olfactory signal transduction cascade contain a DNA binding site that may direct neuronal expression.
1993-09-01

Genes which mediate odorant signal transduction are expressed at high levels in neurons of the olfactory epithelium. The molecular mechanism governing the restricted expression of these genes likely involves tissue-specific DNA binding proteins which coordinately activate transcription through sequence-specific interactions with olfactory promoter regions. We have identified ...

PubMed Central

27
Evaluation of insulin binding and signaling activity of newly synthesized chromium(III) complexes in vitro.

In the present study, the influence of chromium(III) complexes (acetate, chloride, glycinate, histidinate, lactate and propionate) on insulin binding and signal transduction [phosphorylation of tyrosine and serine in the insulin receptor substrate (IRS)-1] was investigated in vitro using three experimental models: isolated rat liver membranes and cultured ...

PubMed

28
Critical in vitro evaluation of responsive MRI contrast agents for calcium and zinc.
2011-01-05

The synthesis of two gadolinium(III) complexes that exhibit an increase in proton relaxivity in the presence of added Ca(2+) or Zn(2+) ions is reported. The complexes increase their hydration state from zero to one following metal-ion binding, confirmed by spectral measurements on the corresponding Eu(III) complexes. At a field of 1.4 ...

PubMed

29
Critical In Vitro Evaluation of Responsive MRI Contrast Agents for Calcium and Zinc.
2011-01-01

The synthesis of two gadolinium(III) complexes that exhibit an increase in proton relaxivity in the presence of added Ca(2+) or Zn(2+) ions is reported. The complexes increase their hydration state from zero to one following metal-ion binding, confirmed by spectral measurements on the corresponding Eu(III) complexes. At a field of ...

PubMed

30
GraphWeb: mining heterogeneous biological networks for gene modules with functional significance
2008-07-01

Deciphering heterogeneous cellular networks with embedded modules is a great challenge of current systems biology. Experimental and computational studies construct complex networks of molecules that describe various aspects of the cell such as transcriptional regulation, protein interactions and metabolism. Groups of interacting genes and proteins reflect network ...

PubMed Central

31
GraphWeb: mining heterogeneous biological networks for gene modules with functional significance.
2008-05-06

Deciphering heterogeneous cellular networks with embedded modules is a great challenge of current systems biology. Experimental and computational studies construct complex networks of molecules that describe various aspects of the cell such as transcriptional regulation, protein interactions and metabolism. Groups of interacting genes and proteins reflect network ...

PubMed

32
The global regulator RNase III modulates translation repression by the transcription elongation factor N.
2002-08-01

Efficient expression of most bacteriophage lambda early genes depends upon the formation of an antiterminating transcription complex to overcome transcription terminators in the early operons, p(L) and p(R). Formation of this complex requires the phage-encoded protein N, the first gene product expressed from the p(L) operon. The N leader RNA contains, in this order: the NUTL site, an RNase ...

PubMed

33
Epigenetic modulation of the protein kinase A RII? (PRKAR2A) gene by histone deacetylases 1 and 2 in human smooth muscle cells.
2011-01-01

Recently we reported that the expression of the protein kinase A (PKA) regulatory subunit RII? is dynamically regulated in human smooth muscle cells of the uterus. We showed that expression levels of mRNA/protein were substantially increased during pregnancy and decreased upon labour, changes that were mirrored by particulate type II PKA activity. This implied an important role for RII? in ...

PubMed

34
Protease nexins: cell-secreted proteins that mediate the binding, internalization, and degradation of regulatory serine proteases.
1983-12-01

The protease nexins (PN-I, Mr approximately 38,000; PN-II, Mr approximately 95,000; and PN-III, Mr approximately 31,000) are recently described cell-secreted proteins that selectively link to regulatory serine proteases in the extracellular environment and mediate their cellular binding, internalization, and degradation. In the present studies we compared ...

PubMed

35
Molecular evolution of SPARC: absence of the acidic module and expression in the endoderm of the starlet sea anemone, Nematostella vectensis.
2009-12-31

The matricellular glycoprotein SPARC is composed of three functional domains that are evolutionarily conserved in organisms ranging from nematodes to mammals: a Ca(2+)-binding glutamic acid-rich acidic domain at the N-terminus (domain I), a follistatin-like module (domain II), and an extracellular Ca(2+)-binding (EC) ...

PubMed

36
A Novel Cellulosomal Scaffoldin from Acetivibrio cellulolyticus That Contains a Family 9 Glycosyl Hydrolase
1999-11-01

A novel cellulosomal scaffoldin gene, termed cipV, was identified and sequenced from the mesophilic cellulolytic anaerobe Acetivibrio cellulolyticus. Initial identification of the protein was based on a combination of properties, including its high molecular weight, cellulose-binding activity, glycoprotein nature, and immuno-cross-reactivity with the cellulosomal scaffoldin of ...

PubMed Central

37
Using Small Molecules to Modulate a Protein
2008-04-11

This animation illustrates how a small molecule binds to a protein. As a result of the binding, the protein alters its shape and becomes inactivated.

NSDL National Science Digital Library

38
Multiple binding sites for the general anesthetic isoflurane identified in the nicotinic acetylcholine receptor transmembrane domain
2010-08-10

An extensive search for isoflurane binding sites in the nicotinic acetylcholine receptor (nAChR) and the proton gated ion channel from Gloebacter violaceus (GLIC) has been carried out based on molecular dynamics (MD) simulations in fully hydrated lipid membrane environments. Isoflurane introduced into the aqueous phase readily partitions into the lipid membrane and the ...

PubMed Central

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