James C. Mullikin, Ph.D.

Associate Investigator, Genome Technology Branch
Head, Comparative Genomics Unit

Selected Publications

Mullikin J.C., McMurray A.A. DNA sequencing: sequencing the genome, fast. Science, 283:1867-69. 1999. [PubMed]

Mullikin J.C., Hunt S.E., Cole C.G., Mortimore B.J., Rice C.M., Burton J., Matthews L.H., Pavitt R., Plumb R.W., Sims S.K., Ainscough R.M., Attwood J., Bailey J.M., Barlow K., Bruskiewich R.M., Butcher P.N., Carter N.P., Chen Y., Clee C.M., Coggill P.C., Davies J., Davies R.M., Dawson E., Francis M.D., Joy A.A., Lamble R.G., Langford C.F., Macarthy J., Mall V., Moreland A., Overton-Larty E.K., Ross M.T., Smith L.C., Steward C.A., Sulston J.E., Tinsley E.J., Turney K.J., Willey D.L., Wilson G.D., McMurray A.A., Dunham I., Rogers J., Bentley D.R. An SNP Map of Human Chromosome 22. Nature, 28;407(6803):516-20. 2000. [PubMed]

Ning Z., Cox A.J., Mullikin J.C. SSAHA: A Fast Search Method for Large DNA Databases. Genome Res, 11(10):1725-9. 2001. [PubMed]

The International SNP Map Working Group. A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms. Nature, 409:928-933, 2001. [PubMed]

Mullikin. J.C., Ning, Z. The Phusion Assembler. Genome Res, 13(1):81-90. 2003. [PubMed]

Stein L.D., Bao, Z., Blasiar, D., Blumenthal, T., Brent, M.R., Chen, N., Chinwalla, A., Clarke, L., Clee, C., Coghlan, A., Coulson, A., D'Eustachio, P., Fitch, D.H., Fulton, L.A., Fulton, R.E., Griffiths-Jones, S., Harris, T.W., Hillier, L.W., Kamath, R., Kuwabara, P.E., Mardis, E.R., Marra, M.A., Miner, T.L., Minx, P., Mullikin, J.C., Plumb, R.W., Rogers J., Schein, J.E., Sohrmann, M., Spieth. J., Stajich. J.E., Wei. C., Willey D, Wilson RK, Durbin R, Waterston RH. The Genome Sequence of Caenorhabditis briggsae: A Platform for Comparative Genomics. PLoS Biol, 1(2):E45. 2003. [PubMed]

Blakesley, R.W., Hansen, N.F., Mullikin, J.C., Thomas, P.J., McDowell, J.C., Maskeri, B., Young, A.C., Benjamin, B., Brooks, S.Y., Coleman, B.I., Gupta, J., Ho, S.L, Karlins EM, Maduro QL, Stantripop S, Tsurgeon C, Vogt JL, Walker MA, Masiello CA, Guan X, Bouffard GG, Green ED; NISC Comparative Sequencing Program. An intermediate grade of finished genomic sequence suitable for comparative analyses. Genome Res. 14(11):2235-44. 2004. [PubMed]

Margulies E.H., Vinson, J.P., Miller, W., Jaffe, D.B., Lindblad-Toh, K., Chang, J.L., Green, E.D., Lander, E.S., Mullikin, J.C., Clamp, M. An initial strategy for the systematic identification of functional elements in the human genome by low-redundancy comparative sequencing. Proc Natl Acad Sci USA, 102(13):4795-800. 2005. [PubMed]

The International HapMap Consortium. A haplotype map of the human genome. Nature, 437(7063):1299-320. 2005. [PubMed]

Ryan, J.F., Burton P.M., Mazza, M.E., Kwong, G.K., Mullikin, J.C., Finnerty, J.R. The cnidarian-bilaterian ancestor possessed at least 56 homeoboxes. Evidence from the starlet sea anemone, Nematostella vectensis. Genome Biol, 7(7):R64. 2006. [PubMed]

Spencer, C.C., Deloukas, P., Hunt, S., Mullikin, J., Myers, S., Silverman, B., Donnelly, P., Bentley, D., McVean, G. The influence of recombination on human genetic diversity. PLoS Genet, 2(9):e148. 2006. [PubMed]

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Last Reviewed: February 4, 2009