Chodavarapu, R.K., Feng, S., Ding, B., Simon, S.A., Lopez, D., Jia, Y., Wang, G., Meyers, B.C., Jacobsen, S.E., Pellegrini, M. 2012. Transcriptome and methylome interactions in rice hybrids.. Proceedings of the National Academy of Sciences. 109:30-36.
Jia, Y., Zhang, Z., Xing, J., Wang, J., Correll, J.C., Cartwright, R. 2012. Natural Variation and Evolution of the Avirulence Genes in Magnaporthe Oryzae. American Phytopathological Society. published online.
Roychowdhury, M., Jia, Y., Jia, M.H., Fjellstrom, R.G., Cartwright, R. 2012. Identification of the rice blast resistance gene Pi-b in the national small grains collection. Journal of Phytopathology. Phytopathology 102:700-706..
Zhao, G., Yan, Z., Jia, Y., Deren, C.W., Dai, L. 2012. Analysis of rice blast resistance in rice breeding parents from USA using molecular markers and pathogenicity assays, Molecular Plant Breeding of China. 10: 207-213.
Hyma, K., Olsen, K., Jia, Y., Caicedo, A. 2012. Genomic structure of weedy rice. Annual International Plant & Animal Genome Conference. Abstract for conference.
Rioux, R., Manmathan, H., Singh, P., De Los Reyes, B., Jia, Y., Tavantzis, S. 2011. Comparative analysis of putative pathogenesis-related gene expression in two Rhizoctonia solani pathosystems. Current Genetics. 57:391-408.
Thurber, C., Olsen, K., Jia, Y., Caicedo, A. 2011. Molecular evolution of flowering time loci in U.S. weedy rice [abstract]. In: Botany 2011, July 9 – 13, 2011, St. Louis, Missouri. p. 274.
RoyChowdhury, M., Jia, Y., Jackson, A.K., Jia, M.H., Fjellstrom, R.G., Cartwright, R. 2012. Analysis of rice blast resistance gene Pi-z in rice germplasm using pathogenicity assays and DNA markers. Euphytica. 184:35-46.
Reagon, M., Thurber, C.S., Olsen, K.M., Jia, Y., Caicedo, A.L. 2011. The short and the long of it: SD1 polymorphism and the evolution of growth trait divergence in U.S. weedy rice. Molecular Ecology. 20:3743-3756. Available: DOI:10:1111.
Pinson, S.R., Gibbons, J., Jia, Y. 2011. Breeding for rice fissure resistance made possible through development of a new selection technique and identification of molecular gene tags. Texas Rice Special Section, Highlighting Research in 2011. p. II.
Jia, Y., Bryant, R.J., Jia, M.H., McClung, A.M., Liu, G., Oard, J., Correa, F. 2011. Release of four new breeding lines having resistance to blast and sheath blight diseases. Texas Rice Special Section, Highlighting Research in 2011. p. VIII-IX.
Zhou, X., Kumar, K.A., Reddy, M.S., Liu, G., Kloepper, J.W., Jia, Y., Allen, T.W., Lu, S. 2011. Biocontrol-based sheath blight management to reduce fungicide use on rice. Texas Rice Special Section, Highlighting Research in 2011. p. XXIV-XXV.
Venu, R., Jia, Y., Liu, G., Jia, M.H., Nobuta, K., Sreerekha, M., Moldenhauer, K., Pellegrini, M., Jacobsen, S., McClung, A.M., Meyers, B., Wang, G. 2011. Molecular mapping of yield related traits in a recombinant inbred line population of a Nipponbare x 93-11 cross and identification of candidate genes associated with heterosis in rice [abstract]. American Society of Plant Biologists Annual Meeting, Minneapoli, Minnesota. Abstract P15068.
Jia, Y. 2010. Genetic and genomic dissection of resistance genes to the rice sheath blight pathogen. Plant and Animal Genome Conference. http://www.intl-pag.org/19/abstracts/P05b_PAGXIX_257.html.
Yang, Y., Yang, M., Li, M., Jia, Y., Zhou, E. 2011. Isolation and characterization of a phytotoxin from Rhizoctonia solani, the causal agent of rice sheath blight. Asian Journal of Chemistry 23(8):3500-3508.
Jia, Y., Jia, M.H., Liu, G. 2011. Linkage Block and Recombination Suppression at the Pi-ta locus at the Centromere Region of Rice Chromosome 12. American Phytopathology Society. 101:S82.
Roychowdhury, M., Jia, Y., Jia, M.H., Fjellstrom, R.G., Cartwright, R.D. 2011. Characterization of the Pi-b Rice Blast Resistance Gene in the National Small Grains. American Phytopathology Society. 101:S156.
Dai, Y., Jia, Y., Correll, J.C., Wang, X., Wang, Y. 2010. Diversification and evolution of the avirulence gene AVR-Pita1 in field isolates of Magnaporthe oryzae. Fungal Genetics and Biology. 47:973-980.
Jia, Y. 2011. Plants and pathogens engage in trench warfare-knowledge learned from natural variation of rice blast resistance gene Pi-ta and the corresponding avirulence gene AVR-Pita1 [abstract]. In: Fifth International Rice Blast Conference, August 12-14, 2010, Little Rock, Arkansas. p. 9.
Roy-Chowdhury, M., Jia, Y., Jia, M.H., Jackson, A.K., Fjellstrom, R.G., Cartwright, R.D. 2010. Identification of rice blast resistant gene Pi-z(t) in NSGC using DNA markers and pathogenicity assays [abstract]. 5th International Rice Blast Conference, August 12-14, 2010, Little Rock, Arkansas. Poster Abstract IV-CP-51.
Lee, S., Jia, Y., Costanzo, S., Olsen, K.M., Caicedo, A., Gealy, D.R., Jia, M.H. 2010. Evolutionary dynamics and structure of the rice blast resistance locus Pi-ta in wild, cultivated, and US weedy rice [abstract]. 5th International Rice Blast Conference, August 12-14, 2010, Little Rock, Arkansas. Abstract II-CO-85.
Liu, G., Jia, Y. 2010. Mapping quantitative trait loci of rice to blast using physiological races of the fungus [abstract]. 5th International Rice Blast Conference, August 12-14, 2010, Little Rock, Arkansas. Poster Abstract IV-P-56.
Wang, X., Wu, D., Jia, Y., Zhang, M. 2011. Characterization of rice lesion mimic mutants of 93-11 for a better understanding of general host defense response to both rice blast and sheath blight diseases [abstract]. In: Fifth International Rice Blast Conference, August 12-14, 2010, Little Rock, Arkansas. p. 23.
Dai, Y., Correll, J.C., Jia, Y. 2010. Understanding the molecular mechanism of instability of the avirulence gene AVR-Pita1 in field isolates of Maganporthe oryzae [abstract]. 5th International Rice Blast Conference, August 12-14, 2010, Little Rock, Arkansas. Poster Abstract I-CP-12.
Costanzo, S., Yang, Y., Jia, Y. 2010. New insight for two major rice blast R genes: Pi-ta and Pi-km [abstract]. 5th International Rice Blast Conference, August 12-14, 2010, Little Rock, Arkansas. Abstract II-CO-84.
Reddyvari-Channaraya, V., Madhav, M., Nobuta, K., Sreerekha, M.V., Chen, S., Songkumarn, P., Jia, Y., Meyers, B.C., Wang, G. 2011. Expression profiling of common and specific defense responses of rice to Magnaporthe oryzae infection using deep sequencing technologies [abstract]. In: Fifth International Rice Blast Conference, August 12-14, 2010, Little Rock, Arkansas p. 75.
Reddyvari-, C.V., Madhav, S., Nobuta, K., Sreerekha, M.V., Chen, S., Songkumarn, P., Jia, Y., Meyers, B.C., Wang, G. 2010. Expression profiling of common and specific defense responses of rice to Magnaporthe oryzae infection using deep sequencing technologies [abstract]. 5th International Rice Blast Conference, August 12-14, 2010, Little Rock, Arkansas. Poster Abstract II-CP-30.
Pinson, S.R., Gibbons, J.R., Jia, Y. 2010. New method opens opportunity to proactively select for fissure resistance in early breeding generations. Texas Experiment Station Field Day Handout. VI-VII - http://beaumont.tamu.edu/eLibrary/Newsletter/2010_Highlights_in_Research.pdf..
Zhou, X.G., Tabien, R.E., Jia, Y., Mcclung, A.M., Mccauley, G., Liu, G., Vawter, J. 2010. Establishment of new rice disease nurseries in Texas. Texas Experiment Station Field Day Handout. Texas rice Special Section XVII.
Jia, Y. 2011. Gene discovery of crop disease in the postgenome era. Gu, W., Wang, Y., editors. Gene Discovery for Disease Models, 1st edition. John Wiley & Sons, Inc. p. 425-441.
Jia, Y. 2010. Co-evolution of the rice blast resistance gene Pi-ta and Magnaporthe oryzae avirulence gene AVR-Pita1. In: 19th International Plant Resistance to Insects, Charleston, SC, March 28-31,2010.
Costanzo, S., Jia, Y. 2010. Sequence variation at the rice blast resistance gene Pi-km locus: Implications for the development of allele specific markers. Plant Science. 178-523-530.
Thurber, C.S., Reagon, M., Gross, B.L., Olsen, K.M., Jia, Y., Caicedo, A.L. 2010. Molecular evolution of the sh4 shattering locus in U.S. weedy rice. Molecular Ecology. 19:3271-3284.
Pinson, S.R., Jia, Y., Gibbons, J. 2010. Early generation selection for rice fissure resistance proves effective and indicates a fissure resistance gene on chromsome 1. Rice Technical Working Group Meeting Proceedings. CDROM.
Jia, Y., Costanzo, S., Lee, S., Dai, Y., Correll, J., Roy-Chodhury, M., Cartwright, R., Lee, F. 2010. An update of genetic studies of disease resistance genes and their utilizations for rice protection. In: Proceedings of the Rice Technical Working Group Meeting, Feb. 22-24, 2010, Biloxi, MS. CDROM
Jia, Y., Wang, G.L. 2010. Compare and contrast invasive growths and global gene expressions of rice after infections with rice blast and sheath blight pathogens [abstract]. Rice Technical Working Group Meeting Proceedings, February 18-20, 2008, San Diego, California. CDROM.
Lui, G., Jia, Y., Mcclung, A.M., Oard, Correll, J.C. 2010. Confirming QTLs and finding additional Loci responsible for resistance to Sheath Blight in Rice. In: Proceedings of the 33rd Rice Technical Working Group Meeting, Feb. 22-24, 2010, Biloxi, MS. CDROM
Liu, G., Jia, Y., Jia, M.H., Venu, R., Wang, G., Meyers, B., McClung, A.M. 2010. Characterization of the Recombinant Inbred Line Population Derived from the Cross of Nipponbare/9311. In: Proceedings of the 33rd Rice Technical Working Group Meeting, Feb. 22-24, 2010, Biloxi, MS. CDROM
Costanzo, S., Jia, Y. 2010. New Marker Development for the Rice Blast Resistance Gene Pi-km. In: Proceedigs 33rd Rice Technical Working Group Meetings, February 22-24, 2010, Biloxi, MS. CDROM.
Jia, Y. Understanding the molecular mechanisms of the instability of rice blast resistance. In: Proceedings of Plant and Animal Genome XVIII Conference, January 9-13, 2010, San Diego, CA. p. 521.
Caicedo, A.L., Reagon, M., Thurber, C.S., Olsen, K.L., Gross, B.L., Jia, Y. 2010. The origin of weediness in U.S. red rice [abstract]. Plant and Animal Genome Conference Proceedings, January 9-13, 2010, San Diego, California. Abstract W629.
Jia, Y., Moldenhauer, K.A. 2010. Development of morogenic and digenic rice lines for blast resistance genes of Pi-ta, Pi-kh/Pi-ks. Journal of Plant Registrations. 4:163-166.
Han, Z., Wu, F., Deng, G., Qian, G., Yu, M., Jia, Y. 2009. Structural and expressional analysis of the B-hordein genes in Tibetan hull-less barley. Genetica. 138-227-239.
Lee, S., Costanzo, S., Jia, Y., Olsen, K.M., Caicedo, A.L. 2009. Evolutionary dynamics of the genomic region around the blast resistance gene Pi-ta in AA genome Oryza species. Genetics. 183:1315-1325.
Jia, Y. 2009. A user friendly method to isolate and single spore the fungi Magnaporthe oryzae and Magnaporthe grisea obtained from diseased field samples. Plant Health Progress. Page 1-4.doi:10.1094/PHP-2009-1215-01-BR, Online.
Pinson, S.R., Gibbons, J., Jia, Y. 2009. Selection for fissure resistance now made possible in early breeding generations. Texas Rice, Highlighting Research in 2009. pp. VI-VII.
Jia, Y. 2009. Artificial introgression of a large fragment around the Pi-ta rice blast resistance gene in backcross progenies and several elite rice cultivars. Heredity. 103(4):333-339.
Jia, Y., Liu, G., Costanzo, S., Lee, S., Dai, Y. 2009. Current progress on genetic interactions of rice with rice blast and sheath blight fungi. Frontiers of Agriculture in China. 3(3):231-239.
Lee, S., Wasmishe, Y., Jia, Y., Liu, G., Jia, M.H. 2009. Identification of two major resistance genes against race IE-1k of Magnaporthe oryzae in the indica rice cultivar ZHE733. Molecular Breeding. 24:127-134.
Jia, Y., Lee, F.N., McClung, A.M. 2009. Determination of resistance spectra of the Pi-ta and Pi-k genes to U.S. races of Magnaporthe oryzae causing rice blast in a recombinant inbred line population. Plant Disease. 93(6):639-644.
Dai, Y., Jia, Y., Correll, J.C. 2009. Structural and functional analysis of the avirulence gene AVR-Pita1 of the rice blast fungus in isolates of Magnaporthe oryzae worldwide [abstract]. In: Plant and Animal Genome XVII Conference Abstracts. January 10-14, 2009, San Diego, California. P679.
Lee, S., Jia, Y. 2009. Molecular evolution and strong selective sweep at the rice blast resistance gene Pi-ta during crop domestication. In: Proceedings Plant and Animal Genome XVII Conference, January 10-14, 2009, San Diego,CA. P243.
Lee, S., Wamishe, Y., Jia, Y., Liu, G., Jia, M.H. 2009. Mapping two major resistance genes in an indica cultivar Zhe733 to the race IE-1K of Magnaporthe oryzae. In: Proceedings of Plant and Animal Genome XVII Conference, January 10-14-2009, San Diego, CA. W506.
Xueyan, W., Fjellstrom, R.G., Jia, Y., Yan, W., Jia, M.H., Scheffler, B.E., Dianxing, W., Qingyao, S., McClung, A.M. 2009. Worldwide distribution and origin of rice blast resistance gene Pi-ta. In: Proceedings of the Plant and Animal Genome Conference XVII, January 10-14-2009, San Diego, CA. P116.
Pinson, S.R., Gibbons, J.W., Jia, Y. 2009. Effective early-generation selection for rice resistant to kernel fissuring to hasten breeding efforts. Rice Utilization Workshop Proceedings. http://www.usarice.com/doclib/124/3957.pdf.
Olsen, K.M., Reagon, M., Caicedo, A.L., Gross, B.L., Jia, Y., Lee, S. 2009. Origins and evolution of weedy rice in the US. In: Proceedings of Plant and Animal Genome Conference XVII, January 10-14, 2009, San Diego, CA. W506.
Lee, F.N., Cartwright, R.D., Jia, Y., Correll, J.C. 2009. Field resistance expressed when the PI-TA gene is compromised by Magnaporthe oryzae. In: Wang, G.-L., Valen, B. (eds.) Advances in Genetics, Genomics and Control of Rice Blast Disease. Springer Science and Media. p. 281-290.
Correll, J.C., Boza, E.J., Seyran, E., Cartwright, R.D., Currie, M.K., Lee, F.N. 2009. Examination of the rice blast pathogen population diversity in Arkansas, USA – Stable or Unstable? In: Wang, G.-L., Valent, B. (eds.) Advances in Genetics, Genomics and Control of Rice Blast Disease. Springer Science and Media. p. 217-228.
Pinson, S.R., Gibbons, J.W., Jia, Y. 2008. Early generation selection for resistance to rice kernel fissuring proves effective. [abstract] American Society of Agronomy Abstracts. p. 552-8.
Wang, X., Jia, Y., Shu, Q., Wu, D. 2008. Haplotype diversity at the Pi-ta locus in cultivated rice and its wild relataives. Phytopathology. 98:1305-1311.
Jia, Y. 2009. Understanding the molecular mechanisms of rice blast resistance using rice mutants. Shu, Q.Y., editor, Induced Plant Mutations in the Genomics Era. Food and Agriculture Organization of the United Nations, Rome. p. 375-378.
Gomaa, N.M., Rothrock, C.S., Jia, Y. 2008. Sequence variation of the rDNA internal transcribed spacer (ITS) region among isolates of Rhizoctonia solani. Proceedings of 4th International Symposium of Rhizoctonia, Aug. 20-22, 2008, Berlin Germany. p. 50.
Jia, Y., Liu, G., McClung, A.M. 2008. Development of the recombinant inbred line population of tropical japonica Lemont crossed with indica Jasmine 85. American Phytopathology Society 98:S75.
Liu, G., Jia, Y., Correa-Victoria, F., McClung, A.M. 2008. Identification of quantitative trait loci (QTLs) responsible for sheath blight resistance in rice using recombinant inbred line population of Lemont X Jasmine 85 [abstract]. American Phytopathology Society. 98:S92.
Jia, Y., Wang, X., Costanzo, S., Lee, S. 2008. Understanding the co-evolution of the rice blast resistance gene Pi-ta and Magnaporthe oryzae avirulence gene AVR-Pita. G.-L. Wang, B. Valent (eds.), Advances in Genetics, Genomics and Control of Rice Blast Disease pp. 137-148.
Pinson, S.R., Oard, J.H., Groth, D., Miller, R., Jia, M.H., Jia, Y., Fjellstrom, R.G., Mackill, D., Li, Z. 2008. Registration of TIL:455, TIL:514, and TIL:642, three rice germplasm lines containing introgressed sheath blight resistance alleles. Journal of Plant Registrations. 2(3):251-254.
Costanzo, S., Jia, M.H., Jia, Y. 2008. Mapping of a genetic component required for Pi-ta-mediated signal recognition. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
Pinson, S.R., Wang, Y., Liu, G., Jia, M.H., Jia, Y., Sharma, A., Fjellstrom, R.G., Tabien, R.E. 2008. Using a set of TeQing-into-Lemont chromosome segment substitution lines for fine mapping QTL: Case studies on sheath blight resistance, spreading culm, and mesocotyl elongation. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
Li, W., Lei, C., Cheng, Z., Jia, Y., Huang, D., Liu, Z., Wang, J., Shi, K., Zhang, X., Su, N., Guo, X., Zhai, H., Wan, J. 2008. Identification of SSR markers for a broad-spectrum blast resistance gene Pi-20(t) for marker-assisted breeding. Molecular Breeding. 22:141-149.
Jia, Y., Marin, R. 2008. Identification of a new locus Ptr(t) required for rice blast resistance gene Pi-ta-mediated resistance. Molecular Plant-Microbe Interactions. 21(4):396-403.
Jia, Y., Wang, G., Valent, B. 2008. Global gene expression of rice after infections with rice blast and sheath blight pathogens. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
Jia, Y. 2008. Mechanisms of Rice Blast Resistance and Its Implication for Breeding for Improved Resistance. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
Jia, Y., Rutger, J.N., Moldenhauer, K.K., Gibbons, J. 2008. Development and characterization of deletion and mapping populations for functional genomics and rice breeding. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
Liu, G., Jia, Y., Jia, M.H., McClung, A.M., Correll, J.C. 2008. Molecular characterization of the recombinant inbred line population of the cross of Lemont with Jasmine 85. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
Liu, G., Jia, Y., Correa, F., Jia, M.H., McClung, A.M., Groth, D., Correll, J.C., Rutger, J.N. 2008. Identification of sheath blight resistance QTLs in rice using recombinant inbred line population of Lemont X Jasmine 85. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
Costanzo, S., Wang, X., Jia, Y. 2008. Analysis of the effectiveness of the rice blast resistance gene Pi-ta. In: Proceedings of the 32nd Rice Technical Working Group Meetings, February 18-21, 2008, San Diego, CA. 2008. CDROM.
Jia, Y., Gealy, D.R., Lin, M., Wu, L., Black, H.L. 2008. Carolina foxtail (Alopecurus carolinianus): Susceptibility and suitability as an alternative host to rice blast disease (Magnaporthe oryzae [formerly M. grisea]. Plant Disease. 92(4):504-507.
Pinson, S.R., Liu, G., Jia, Y., Jia, M.H., Fjellstrom, R.G., Sharma, A. 2007. A new rice gene-mapping populatin containing indica chromosomal segments introgressed into a tropical japonica background. [abstract] American Society of Agronomy Abstracts. p.277-6.
Mcclung, A.M., Groth, D., Oard, J.H., Utomo, H., Moldenhauer, K.K., Boza, E., Scheffler, B.E., Jia, Y., Liu, G., Correa, F., Fjellstrom, R.G. 2007. Development and characterization of RiceCAP QTL mapping population for sheath blight resistance. [abstract] American Society of Agronomy Abstracts. p. 259-4.
Jia, Y. 2007. Understanding the coevolution of rice blast resistance gene Pi-ta and Magnaporthe oryzae avirulence gene AVR-Pita. Intl. Rice Blast Conference, October 8-14, 2007, Changsha, China p. 27.
Correll, J.C., Boza, E.J., Seyran, E., Cartwright, R.D., Jia, Y., Lee, F.N. 2007. Examination of the rice blast pathogen population diversity between 1990 and 2006 - Stable or unstable? 4th Intl. Rice Blast Conference, October 108-14, 2007, Changsha, China. p. 46.
Wang Zhonghua, Jia, Y., Lin, H., Valent, B., Rutger, J.N. 2007. Host active defense responses occur within 24 hours after pathogen inoculation in the rice blast system. 4th Intl. Rice Blast Conference, October 8-14, 2007, Changsha, China. p. 37.
Wamishe, Y.A., Jia, Y., Singh, P., Cartwright, R.D., Eizenga, G.C., Lee, F.N. 2007. Studies on isolates of Rhizoctonia solani from Arkansas for management of rice sheath blight. Frontiers of Agriculture in China. 1(47):361-367.
Chen, C., Yun, K., Ressom, H., Mohanty, B., Bajic, V.B., Jia, Y., Yun, S., De Los Reyes, B.G. 2007. Reactive oxygen species trigger a regulatory module involved in the early responses of rice seedlings to cold stress. Biomed Central (BMC) Genomics. 18:175.
Venu, R.C., Jia, Y., Gowda, M., Jia, M.H., Jantasuriyarat, C., Stahlbert, E., Li, H., Rhineheart, A., Reddy, P., Singh, P., Rutger, J.N., Kudrna, D., Wing, R., Nelson, J.C., Wang, G. 2007. Rl-sage and microarray analysis of the rice defense transcriptome after Rhizoctonia solani infection. Molecular Genetics and Genomics. 278:421-431.
Jia, Y., Jia, M.H., Gubrij, K.I., Wang, G. 2007. Molecular dynamics of interactions of rice with rice blast and sheath blight pathogens. [abstract] American Phytopathological Society, July 28 - August 1, 2007, San Diego, CA. 97:S52.
Jia, Y., Lin, M.J., Liu, G., Mcclung, A.M. 2007. Development of rice materials for studying the genomics of disease resistance. [abstract] American Phytopathology Society, 97:S52.
Wang, X., Jia, Y., Shu, Q. 2007. Natural variation of rice blast resistant gene Pi-ta in Oryza species. American Phytopathological Society Meeting, July 28-August 1, 2007, San Diego, CA. 97:S120.
Dai, Y., Jia, Y., Correll, J. 2007. Molecular mechanisms of the instability of rice blast fungus avirulence gene AVR-Pita. American Phytopathological Society, July 28-August 1, 2007, San Diego, CA. 97:S25.
Jia, Y. 2007. Plants and pathogens engage in trench warfare-knowledge learned from natural variation of rice blast resistance gene Pi-ta. Plant and Animal Genome Conference Proceedings.
Wang, X., Jia, Y., Correll, J., Lee, F.N., Wu, D., Shu, Q. 2007. Natural variation of the rice blast resistance gene Pi-ta in Oryza species and its corresponding avirulence gene AVR-Pita in Magnaporthe oryzae. Plant and Animal Genome Conference Proceedings.
Liu, G., Jia, Y., Jia, M.H., Fjellstrom, R.G., Sharma, A., Li, Z., Pinson, S.R. 2007. Molecular characterization of a population of backcross introgression lines derived from crossing the US japonia rice cultivar Lemont as the recurrent parent withthe Chinese indica cultivar TeQing. Plant and Animal Genome Conference Proceedings.
Pinson, S.R., Oard, J.H., Groth, D., Miller, R., Liu, G., Jia, Y., Jia, M.H., Fjellstrom, R.G. 2007. New Breeding Parents Containing Novel QTL for Rice Sheath Blight Resistance Identified by Combining Phenotypic and Molecular Characterizations. [abstract]. Plant and Animal Genome Conference XV, January 13-17, 2007, San Diego, CA. Available: http://intl-pag.org/15/abstracts.
De Los Reyes, B.G., Cheng, C., Yun, K.Y., Jia, Y., Ressom, H., Yun, S.J. 2006. Candidate regulators of the cold stress response gene regulon of rice. Proceedings 4th International Rice Genetic Symposium, Montpellier, France. p.117.
Jia, Y. 2006. Translational genomics-rice research in agriculture research service [abstract]. China-US Biotech. Workshop, October 22-25, 2006, Beijin, China.
Liu, G., Bernhardt, J., Jia, M.H., Wamishe, Y., Jia, Y. 2007. Molecular characterization of rice recombinant inbred line population derived from a japonica-indica cross. Euphytica. 159:73-82.
Wang, Z., Jia, Y., Rutger, J.N., Xia, Y. 2007. Rapid survey for presence of a blast resistance gene Pi-ta in rice cultivars using the dominant DNA markers derived from portions of the Pi-ta gene. Plant Breeding. 126:36-42.
Jia, Y., Lin, H., Wang, Z., Lin, M.J., Valent, B., Rutger, J.N. 2006. Host active defense responses occur within 24 hours post-inoculation in the rice blast system [abstract]. XII International Congress on Molecular Plant-Microbe Interactions. p. 91.
Singh, P., Jia, Y., Boza, E.J., Correll, J.C., Lee, F.N. 2006. Development of a molecular marker from the rice blast avirulence gene AVR-Pita for surveillance of durable rice blast resistance conferred by Pi-ta in Arkansas. In: Norman, R.J., Meullenet, J.-F., Moldenhauer, K.A.K.., editors. B.R. Wells Rice Research Studies 2005 Arkansas Agricultural Experiment Station Research Series 540. p. 152-159.
Zhou, E., Jia, Y., Correll, J.C., Lee, F.N. 2006. Molecular mechanisms of the instability of avirulence gene avr-pita in rice blast fungus magnaporthe oryzae. In: Norman, R.J., Meullenet, J.-F., Moldenhauer, K.A.K., editors. B.R. Wells Rice Research Studies 2005, Arkansas Agricultural Experiment Station Research Series 540. p. 160-167. Available: http://www.uark.edu/depts/agripub/Publications/researchseries/.
Eizenga, G.C., Agrama, H.A., Lee, F.N., Yan, W., Jia, Y. 2006. Twelve rice germplasm accessions identified with novel blast resistance for US rice variety improvement. In? Norman, R.J. Meullenet, J.-F. and Moldenhauer, K.A.K., editors. B.R. Wells Rice Research Studies 2005. Arkansas Agricultural Experiment Station Research Series 540. p. 55-61. Available: http:www/uark.edu/depts/agripub/Publications/research series/.
Gowda, M., Varichannarayappa, V., Jia, Y., Stahlberg, E., Pampanwar, V., Soderlund, C., Want, G. 2006. Use of rl-sage analysis to identify novel fungal and plant genes involved in host-pathogen interactions. In: Ronold, P.C,, editor. Methods and Protocols, Humann press, Inc., Totowa, New Jersey Humann Press, Inc. Vol. 354:131-144.
Jia, Y., Fjellstrom, R.G., Jia, Melissa H., Yan, W., Rutger, J.N., McClung, A.M. 2006. Development and characterization of rice mutants altered in the rice blast resistant gene pi-ta-mediated disease resistance pathway [abstract]. American Phytopathological Society Annual Meeting. Phytopathology. 96:S54.
Venu, R.C., Jia, Y., Gowda, M., Jia, M.H., Bellizzi, M., Singh, P., Rutger, J.N., Wang, G. 2006. Rl-sage analysis of the rice defense transcriptome during rice and Rhizoctonia solani interaction [abstract]. American Phytopathological Society Abstracts. 96.
Cheng, C., De Los Reyes, B.G., Jia, Y., Yun, S., Zhang, Y., Ressom, H. 2006. Genomic analysis of the early responses of developing rice seedlings to cold stress. Proceedings of the National Academy of Sciences. p. 13.
Cheng, C., De Los Reyes, B.G., Zhang, Y., Ressom, H., Jia, Y., Yun, S.J. 2006. Genomic analysis of the early responses of developing rice seedlings to cold stress [abstract]. In: Proceedings of the XIV Annual International Plant & Animal Genome Conference, Janaury 14-18, 2006, San Diego, California. p. 734.
Jia, Y., Zhou, E., Lee, F.N., Correll, J., Singh, P. 2006. Progress in developing molecular markers for tagging magnaporthe grisea pathotypes in the usa. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006. 2006 CDROM.
Jia, Y., Singh, P., Jia, M.H., Wang, G., Wamishe, Y., Zhu, L., Zhou, E. 2006. Development of molecular strategies to control rice sheath blight disease [abstract]. In: Rice Technical Working Group Meeting Proceedings, February 28 - March 1, 2006, Houston, Texas. 2006. CDROM.
Jia, Y., Valent, B. 2006. Progress in developing rna markers for determining disease reactions in the rice blast system [abstract]. In: Rice Technical Working Group Meeting Proceedings, February 28 - March 1, 2006, Houston, Texas. 2006. CDROM.
Jia, Y., Rutger, J.N., Xie, J., Lin, M.J., Moldenhauer, K., Gibbons, J. 2006. Development of us genetic resources for rice functional genomics. Rice Technical Working Group Meeting Proceedings, February 29-March 2, 2006, Houston, TX. 2006 CDROM.
Pinson, S.R., Jia, Y., Fjellstrom, R.G., Jia, M.H., Hulbert, S., Liu, K., Nelson, J.C. 2006. Bringing quantitative traits under breeder control by combining QTL mapping with candidate gene approaches: A case study of rice sheath blight resistance. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006, Houston, Texas. 2006 CDROM.
McClung, A.M., Yan, W., Jia, Y., Lee, F.N., Marchetti, M.A., Fjellstrom, R.G. 2006. Genotypic and phenotypic assessment of the NSGC Core Collection of rice for resistance to Pyricularia grisea. Rice Technical Working Group Meeting Proceedings, February 29-March 1, 2006. Houston, Texas. 2006 CDROM.
Liu, G., Bernhardt, J., Jia, M.H., Wamishe, Y., Jia, Y. 2006. Molecular characterization of rice recombinant inbred line population derived from a japonica-indica cross. Rice Technical Working Group Meeting Proceedings, Houston, Texas, February 29-March 2, 2006. 2006. CDROM.
Jia, Y., Zhou, E., Winston, E.M., Singh, P., Correll, J., Valent, B. 2005. Molecular co-evolution of the rice Pi-ta resistance gene and Magnaporthe grisea avirulence gene AVR-Pita [abstract]. International Congress on Molecular Plant-Microbe Interactions. p. 3-7. Available: http://www.lbt.unam.mx/Cancun2005/concurrent182.html.
Jia, Y., Zhou, E., Winston, E., Singh, P., Wang, Z., Correll, J., Lee, F., Jia, M.H. 2005. Translational genomics: a case study of rice Pi-ta resistance gene. In: Proceedings of International Conference on Plant Molecular Breeding, October 27-30, 2005. p. 3.
Jia, Y. 2005. Applied genomics: a short story of the rice Pi-ta resistance gene [abstract]. USDA-China Cooperation Workshop, Workshop was cancelled, abstract shared among ARS-China Cooperators on October 3, 2005.
Eizenga, G.C., Agrama, H.A., Lee, F.N., Yan, W., Jia, Y. 2006. Rice germplasm characterized for R-genes and population structure. Proceedings 10th Congress of SABRAO, August 22-23, 2005, Tsukuba, Japan. CDROM.
Eizenga, G.C., Agrama, H.A., Lee, F.N., Yan, W., Jia, Y. 2005. Understanding the genetic diversity in order to identify R-genes in Oryza spp and O. sativa. In: Proceedings 5th International Rice Genetics Symposium, November 19-23, 2005, Manila, Philippines. 2005 CDROM.
Jia, Y., Valent, B. 2009. Molecular aspects of rice blast disease resistance: Insights from structural and functiona alnalysis of the Pi-ta and AVR-Pita gene pair. In: Datta, S., editor. Rice Improvements in the Genomic Era. Boca Raton, FL: CRC Press, Taylor & Francis Group. p. 207-236.
Yan, W., Fjellstrom, R.G., McClung, A.M., Jia, Y., Bockelman, H.E. 2005. Distribution of blast resistance gene Pi-ta in the USDA rice core collection [abstract]. American Society of Agronomy Abstracts. p. 230-3.
Cheng, C., Zhang, Y., Ressom, H., Jia, Y., Yun, S., De Los Reyes, B.G. 2006. Genomic analysis of the early responses of developing rice seedlings to cold stress [abstract]. American Society of Plant Biologists Annual Meeting. Available: www.aspb.org/search
Wamishe, Y.A., Jia, Y., Singh, P., Cartwright, R.D. 2005. Studies on isolates of Rhizoctonia solani from Arkansas for management of rice sheath. Arkansas Agricultural Experiment Station Research Series 529. p. 142-148.
Lee, F.N., Cartwright, R.D., Jia, Y., Correll, J.C., Moldenhauer, K.A., Gibbons, J.W., Boyett, V., Zhou, E., Boza, E., Seyran, E. 2005. A preliminary characterization of the rice blast fungus on 'Banks' rice. In: Norman, R.J., Meullenet, J.-F., Moldenhauer, K.A.K., editors. B.R. Wells Rice Research Studies 2004, Arkansas Agricultural Experiment Station Research Series 529. p. 103-110. Available: http://www.uark.edu/depts/agripub/Publications/researchseries/
Eizenga, G.C., Agrama, H.A., Lee, F.N., Jia, Y. 2005. Continued evaluation of blast resistance genes in rice wild relatives (Oryza spp.) and unique rice (O. sativa) accessions utilizing DNA markers. In: Norman, R.J., Meullenet, J.-F., Moldenhauer, K.A.K., editors. B.R. Wells Rice Research Studies 2004, Arkansas Agricultural Experiment Station Research Series 529. p. 30-37. Available: http://www.uark.edu/depts/agripub/Publications/researchseries/
Wang, Z., Redus, M., Jia, Y. 2005. Establishment of codominant markers for rice blast resistance gene Pi-ta. Chinese Journal of Rice Science. 19:483-488.
Wang, Z., Redus, M., Jia, Y. 2005. Establishment of codominant marker for rice blast resistance gene pi-ta. Chinese Journal Rice Science. 19(6):483-488.
Lee, F.N., Cartwright, R.D., Jia, Y., Correll, J.C. 2005. Magnaporthe grisea race shift for virulence to the major R gene, Pita, in Arkansas. Proceedings Southern Region American Phytopathology Society. Abstract p. 116.
Jia, Y., Zhou, E., Lin, M.J., Rutger, J.N. 2004. Development and characterization of rice deletion mutants for functional genomics [abstract]. In: Proceedings, 2nd International Rice Functional Genomics Conference, Tucson, Arizona. Abstract p. 178.
Jia, Y., Singh, P., Wang, Z., Winston, E.M., Wamishe, Y., Redus, M., Rutger, J.N. 2004. Development of molecular strategies to control rice blast and sheath blight diseases. Southern Association of Agricultural Scientists Bulletin of Biochemistry and Biotechnology. 17:20-34.
Jia, Y., Rutger, J.N., Wang, Z., Singh, P., Martin, R., Pinson, S.R. 2004. Development and characterization of rice mutant populations for functional genomics of host-parasite interactions. American Phytopathological Society Annual Meeting. Phytopathology. 94(6):47.
Wamishe, Y.A., Jia, Y., Singh, P., Cartwright, R.D. 2004. Characterization of Rhizoctonia solani isolates from rice in Arkansas. American Phytopathological Society Annual Meeting. Phytopathology. 94(6):107.
Singh, P., Wamishe, Y., Eizenga, G.C., Lee, F.N., Jia, Y. 2004. Development of molecular strategies to control rice sheath blight disease. American Phytopathological Society Annual Meeting. Phytopathology. 94(6):96.
Jia, Y., Redus, M.A., Wang, Z., Rutger, J.N. 2004. Development of a co-dominant resistance gene marker by tri-primer polymerase chain reaction. Euphytica. v. 138. p. 97-105.
Jia, Y., Wang, Z., Fjellstrom, R.G., Moldenhauer, K., Flowers, C.B., Rutger, J.N. 2005. Rice pi-ta gene confers resistance to two major pathotypes of the rice blast fungus in the U.S. [abstract]. Rice Technical Working Group Meeting Proceedings. Abstract p. 84.
Jia, Y., Singh, P., Winston, E.M., Wamashe, Y., Correll, J., Lee, F.N., Moldenhauaer, K., Gibbons, J., Rutger, J.N. 2005. Development of molecular strategies to control major rice fungal diseases in the US [abstract]. Rice Technical Working Group Meeting Proceedings. Abstract p. 109.
Correll, J.C., Jia, Y., Boza, E.G., Singh, P., Lee, F. 2005. How does the rice blast pathogen defeat a resistance gene? Rice Technical Working Group Meeting Proceedings. Abstract p. 104.
Singh, P., Jia, Y., Eizenga, G.C., Lee, F. 2005. Development of a detached leaf inoculation method for rapid evaluation of rice cultivar response to sheath blight pathogen. Rice Technical Working Group Meeting Proceedings. Abstract p. 117.
Singh, P., Jia, Y., Eizenga, G.C., Lee, F. 2005. Cloning and characterization of induced genes by the sheath blight pathogen rhizoctonia solani. Rice Technical Working Group Meeting Proceedings. Abstract p. 114.
Winston, E.M., Jia, Y., Correll, J. 2005. Molecular characterization of magnaporthe grisea avirulence alleles (avr-pita) in US pathotypes. Rice Technical Working Group Meeting Proceedings. Abstract p. 110.
Eizenga, G.C., Xiang, G., Jia, Y., Lee, F. 2005. Identification of disease resistance in the Oryza spp. and following its introgression into cultivated rice with DNA markers. Rice Technical Working Group Meeting Proceedings. Abstract p. 115.
Eizenga, G.C., Refeld, R., Lee, F., Emerson, M., Xiang, G., Jia, Y., Yan, W. Identification of blast resistance genes in Indica rice germplasm. Rice Technical Working Group Meeting Proceedings. Abstract. p. 70-71.
Johnson, V.A., Redus, M., Gibbons, J.W., Moldenhauer, K.A., Jiang, J., Jia, Y. 2005. Marker assisted selection for the rice blast resistance gene pi-ta: development and use of an improved co-dominant analysis method [abstract]. Rice Technical Working Group Meeting Proceedings. Abstract p. 62.
Eizenga, G.C., Lee, F.N., Jia, Y. 2004. Identification of blast resistance genes in rice wild relatives (Oryza spp.) and newly introduced rice (O. sativa) lines. Arkansas Agricultural Experiment Station Research Series 417. p. 29-36.
Jia, Y., Wang, Z., Singh, P., Redus, M., Fjellstrom, R.G., Johnson, V., Correll, J., Lee, F., Rutger, J.N. 2004. Rice Pi-ta gene confers resistance to the major pathotypes of the rice blast fungus in the U.S. [abstract]. Annual International Plant & Animal Genome Conference. Abstract P293, p. 145.
Eizenga, G.C., Xiang, G., Jia, Y., Lee, F.N. 2004. DNA marker identification of Oryza spp. for introgression of r-genes [abstract]. Annual International Plant & Animal Genome XII Conference. Available: http://www.intl-pag.org/12/abstracts/P5b_PAG12_P393_XI.html.
Jia, Y., Wang, Z., Fjellstrom, R.G., Moldenhauer, K.A., Azam, M., Correll, J., Lee, F.N., Xia, Y., Rutger, J.N. 2004. Rice pi-ta gene is closely linked with resistance to the major pathotypes of the rice blast fungus in the U.S. Phytopathology. 94:296-301.
Jia, Y., Wang, Z., Singh, P., Rutger, J.N., Martin, R., Pinson, S.R. 2004. Development and characterization of rice mutant populations for functional genomics of host-parasite interactions [abstract]. 15th International Plant Protection Congress Proceedings. p. 64.
Jia, Y., Zhonghua, W., Singh, P., Fjellstrom, R.G., Correll, J., Lee, F.N., Eizenga, G.C., Gealy, D.R., Gibbons, J., Moldenhauer, K.A., Rutger, N., McClung, A., Marchetti, T. 2002. Opportunities for the development of rice blast resistant cultivars/germplasm [abstract]. Proceedings of the Third International Rice Blast Conference. p. 116.
Gibbons, J.A., Lee, F.N., Jia, Y., Eason, R. 2002. Development and evaluation of rice breeding lines for blast resistance at Arkansas, USA [abstract]. Proceedings of the Third International Rice Blast Conference. p. 113.
Correll, J.C., Guerber, J.C., Jia, Y., Lee, F.N. 2002. Molecular,genetic, and virulence diversity of the rice blast pathogen in the United States[abstract]. Proceedings of the Third International Rice Blast Conference. p. 102.
Valent, B., Dalby, M., Kankanala, P., Klaahsen, D., Khang, C., Kang, S., Jia, Y., Bryan, G.T. 2002. Analysis of AVR gene function in pathogenicity and host specificity [abstract]. Proceedings of the Third International Rice Blast Conference. p. 12.
Jia, Y., Wang, Z., Fjellstrom, R.G. 2002. The relationship of the rice blast resistance genes pi-ta and pi-ta2 [abstract]. National American Phytopathology Meetings.P. 2002-0670-AMA.
Singh, P., Jia, Y., Cartwright, R., Lee, F.N., Eizenga, G.C. 2003. Molecular and pathological characterization of rice sheath blight pathogen isolates from arkansas using rDNA-internal transcribed spacer sequences [abstract]. National American Phytopathology Meetings. P-2002-0676-AMA/