Vertebrates
Mammals
Primates
Scientific name | Common name | Build | Tools |
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Homo sapiens | human | Build 36.3 |
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Build 35.1 |
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Macaca mulatta | rhesus macaque | Build 1.1 |
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Pan troglodytes | chimpanzee | Build 2.1 |
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Rodents
Scientific name | Common name | Build | Tools |
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Mus musculus | laboratory mouse | Build 37.1 |
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Build 36.1 |
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Rattus norvegicus | rat | RGSC v3.4 |
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Monotremes
Scientific name | Common name | Build | Tools |
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Ornithorhynchus anatinus | duck-billed platypus | Build 1.1 |
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Marsupials
Scientific name | Common name | Build | Tools |
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Monodelphis domestica | opossum | MonDom5 |
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Other Mammals
Scientific name | Common name | Build | Tools |
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Bos taurus | cattle | Btau_4.0 |
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Build 3.1 (based on Btau_3.1) |
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Bubalus bubalis | river buffalo |
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Canis lupus familiaris | dog | Build 2.1 |
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Equus caballus | horse | EquCab2.0 |
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Felis catus | cat |
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Ovis aries | sheep |
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Sus scrofa | pig | Sscrofa5 |
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Other Vertebrates
Invertebrates
Insects
Scientific name | Common name | Build | Tools |
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Acyrthosiphon pisum | pea aphid | Build 1.1 |
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Anopheles gambiae | African malaria mosquito | AgamP3.3 |
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Apis mellifera | honey bee | Amel_4.0 |
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Amel_2.0 |
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Drosophila melanogaster | fruit fly | Release 5.2 |
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Drosophila pseudoobscura | Release 2.0 |
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Nasonia vitripennis | jewel wasp | Build 1.1 |
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Tribolium castaneum | red flour beetle | Build 2.1 |
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Nematode
Scientific name | Common name | Build | Tools |
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Caenorhabditis briggsae | Build 1.1 |
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Caenorhabditis elegans | nematode | WS190 |
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Echinoderms
Scientific name | Common name | Build | Tools |
---|---|---|---|
Strongylocentrotus purpuratus | purple sea urchin | Build 2.1 |
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Build 1.1 |
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Cnidaria
Scientific name | Common name | Build | Tools |
---|---|---|---|
Hydra magnipapillata | Build 1.1 |
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Other Invertebrates
Scientific name | Common name | Build | Tools |
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Ciona intestinalis | Build 1.1 |
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Protozoa
Scientific name | Common name | Build | Tools |
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Babesia bovis | Build 1.1 |
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Cryptosporidium hominis | Build 1.1 |
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Cryptosporidium parvum | Build 1.1 |
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Dictyostelium discoideum | social amoeba | Build 2.1 |
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Eimeria tenella |
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Giardia intestinalis | Build 1.1 |
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Leishmania braziliensis | Build 1.1 |
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Leishmania infantum | Build 1.1 |
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Leishmania major | Build 1.1 |
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Paramecium tetraurelia | Build 1.1 |
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Plasmodium berghei | Build 1.1 |
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Plasmodium chabaudi | Build 1.1 |
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Plasmodium falciparum | Build 1.1 |
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Plasmodium yoelii | Build 1.1 |
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Tetrahymena thermophila | Build 1.1 |
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Theileria parva | Build 1.1 |
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Trichomonas vaginalis | Build 1.1 |
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Trypanosoma brucei | Build 1.1 |
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Plants
Flowering Plants
Monocots
Scientific name | Common name | Build | Tools |
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Aegilops tauschii |
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Aegilops umbellulata |
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Allium cepa | onion |
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Asparagus officinalis | asparagus |
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Avena sativa | cultivated oat |
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Eragrostis tef | tef |
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Hordeum bulbosum |
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Hordeum vulgare | barley |
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Lolium perenne | ryegrass |
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Oryza sativa | rice | RAP Build 3 |
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Secale cereale | rye |
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Setaria italica | foxtail millet |
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Sorghum bicolor | sorghum |
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Triticum aestivum | wheat |
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Triticum turgidum | durum wheat |
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Zea mays | maize |
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Eudicots
Scientific name | Common name | Build | Tools |
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Arabidopsis thaliana | thale cress | Build 8.1 |
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Beta vulgaris | beet |
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Brassica juncea | brown mustard |
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Brassica napus | rapeseed |
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Brassica nigra | black mustard |
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Brassica oleracea |
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Brassica rapa | field mustard |
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Capsicum annuum | pepper |
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Glycine max | soybean |
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Lotus japonicus | birdsfoot deervetch |
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Manihot esculenta | cassava |
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Medicago sativa | alfalfa |
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Medicago truncatula | barrel medic |
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Phaseolus vulgaris | kidney bean |
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Populus trichocarpa | poplar | Build 1.2 |
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Prunus dulcis | sweet almond |
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Quercus robur | oak |
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Solanum lycopersicoides | nightshade |
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Solanum lycopersicum | tomato |
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Solanum melongena | eggplant |
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Solanum peruvianum | Peruvian tomato |
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Solanum tuberosum | potato |
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Theobroma cacao | cocoa |
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Vigna radiata | mungbean |
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Vitis vinifera | wine grape | IGGP build 1 |
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Algae
Green Algae
Scientific name | Common name | Build | Tools |
---|---|---|---|
Chlamydomonas reinhardtii | Build 1.1 |
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Ostreococcus 'lucimarinus' | Build 2.0 |
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Red Algae
Moss
Scientific name | Common name | Build | Tools |
---|---|---|---|
Physcomitrella patens | Build 1.1 |
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Fungi![Open Group Search page Open Group Search page](https://webarchive.library.unt.edu/web/20090513010110im_/http://www.ncbi.nlm.nih.gov/projects/mapview/mvhome/images/search.png)
Scientific name | Common name | Build | Tools |
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Aspergillus clavatus | Build 1.1 |
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Aspergillus fumigatus | Build 2.1 |
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Aspergillus niger | Build 1.1 |
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Candida glabrata | Build 1.1 |
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Cryptococcus neoformans | Build 2.1 |
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Debaryomyces hansenii | Build 1.1 |
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Encephalitozoon cuniculi | Build 1.1 |
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Eremothecium gossypii | Build 3.1 |
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Gibberella zeae | Build 1.2 |
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Kluyveromyces lactis | Build 1.1 |
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Magnaporthe grisea | rice blast fungus | Build 3.1 |
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Neurospora crassa | Build 2.1 |
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Pichia stipitis | Build 1.1 |
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Saccharomyces cerevisiae | baker's yeast | Build 2.1 |
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Schizosaccharomyces pombe | fission yeast | Build 1.1 |
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Ustilago maydis | Build 1.1 |
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Yarrowia lipolytica | Build 1.1 |
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