Genomes to Life Contractor-Grantee Workshop I
Arlington, Virginia, February
9-12, 2003
Appendix 3: GTL Web Sites
Web Sites
Genomes to Life Web Site
- GTL Roadmap, April 2001: http://genomicsgtl.energy.gov
- Image Gallery, http://genomics.energy.gov/gallery/
- Current Research, http://genomicsgtl.energy.gov/research/index.shtml
- GTL Program FY 2003 Call for Applications, http://www.er.doe.gov/production/grants/Fr03-05.html
Current GTL Program Projects
- July 23, 2002, Press Release “Energy Department Awards $103 Million for Post-Genomic Research” http://genomicsgtl.energy.gov/research/2002awards.shtml
- Oak Ridge National Laboratory for Genomes to Life Center for Molecular and Cellular Systems: A Research Program for Identification and Characterization of Protein Complexes, http://www.ornl.gov/sci/GenomestoLife/
- Lawrence Berkeley National Laboratory for Rapid Deduction of Stress Response Pathways in Metal/Radionuclide Reducing Bacteria, http://vimss.lbl.gov/
- Sandia National Laboratories for Carbon Sequestration in Synechococcus: From Molecular Machines to Hierarchical Modeling, http://www.genomes2life.org/
- University of Massachusetts, Amherst, for Analysis of the Genetic Potential and Gene Expression of Microbial Communities Involved in the in situ Bioremediation of Uranium and Harvesting Electrical Energy from Organic Matter, http://zdna.micro.umass.edu/
- Harvard Medical School for Microbial Ecology, Proteogenomics and Computational Optima, http://arep.med.harvard.edu/DOEGTL/
Complementary Web Sites
- Human Genome Project Information, http://www.ornl.gov/sci/techresources/Human_Genome/
- DOE Microbial Genome Program, http://www.ornl.gov/sci/microbialgenomes/
- Microbial Genomics Gateway, http://microbialgenomics.energy.gov/
Publications and Presentations
GTL Science and Administration
- Program Overview, Jan 2003, http://genomicsgtl.energy.gov/pubs/overview_screen.PDF
- Primer Pictorial; Oct 2001, http://genomicsgtl.energy.gov/primer.shtml
- Genomes to Life Roadmap; April 2001, http://genomicsgtl.energy.gov/roadmap/index.shtml
- Bringing the Genome to Life Report of a subcommittee of the Biological and Environmental Research Advisory Committee (BERAC); August 2000, http://genomicsgtl.energy.gov/history/genome-to-life-rpt.shtml
Workshop Reports on Computing
- Mathematics for GTL Workshop, Gaithersburg, Maryland; March 18-19, 2002, http://genomicsgtl.energy.gov/pubs/GTLMath-6.PDF
- Computer Science for GTL Workshop, Gaithersburg, Maryland; March 6-7, 2002, http://genomicsgtl.energy.gov/pubs/ComputerScience-10.PDF
- Computing Infrastructure and Networking Workshop, Gaithersburg, Maryland; Jan 22-23, 2002, http://genomicsgtl.energy.gov/compbio/mtg_1_22_02/infrastructure.shtml
- Visions for Computational and Systems Biology Workshop for the Genomes to Life Program; September 6-7, 2001 (Notes with Executive Summary), http://genomicsgtl.energy.gov/pubs/CompbioVisions-4.PDF
- First GTL Computational Biology Workshop; Aug 7-8, 2001, http://genomicsgtl.energy.gov/compbio/mtg8_8_01/titlepage.htm
Workshop Reports on Technologies
- Report on the Imaging Workshop for the Genomes to Life Program, April 16-18, 2002, http://genomicsgtl.energy.gov/technology/imaging
- Executive Summary of Workshop on Imaging Technologies, April 16-17, 2002, http://genomicsgtl.energy.gov/pubs/imaging_summary.PDF
- Genomes to Life: Technology Assessment for Mass Spectrometry, Dec 10-11, 2001, http://genomicsgtl.energy.gov/pubs/mass_spec.PDF
Energy Security and Global Climate Change
- James Edmonds, Nov 27, 2001 to Biological and Environmental Research Advisory Committee, http://genomicsgtl.energy.gov/nov27slides/edmonds.htm
- Robin Graham, Nov 27, 2001 to Biological and Environmental Research Advisory Committee, http://genomicsgtl.energy.gov/nov27slides/graham.htm
- Workshop on The Role of Biotechnology in Mitigating Greenhouse Gas Concentrations; June 23, 2001: A Workshop Summary by Ken Nealson and J. Craig Venter, Workshop Cochairs, http://genomicsgtl.energy.gov/warming/GTLBiotechwksp.htm
Bioremediation
- Presentation by Blaine Metting on November 27, 2001 to Biological and Environmental Research Advisory Committee http://genomicsgtl.energy.gov/nov27slides/metting.htm
Video
- 3-D image of a Shewanella oneidensis cell, http://genomicsgtl.energy.gov/pubs/video.shtml#shewanella
Related Publications
- Microbial Ecology and Genomics: A Crossroads of Opportunity. A Report from the American Academy of Microbiology” (based on a colloquium held Feb 23-25, 2001), http://www.asm.org/Academy/index.asp?bid=2124
- A Target Area of the Scientific Simulation Initiative, http://cbcg.lbl.gov/ssi-csb/HomeDetail.html
- Computational Challenges in Structure and Functional Genomics” (IBM Systems Journal, Vol 40, No 2, 2001), http://www.research.ibm.com/journal/sj/402/headgordon.PDF
- The Biomedical Information Science and Technology Initiative” (June 3, 1999), http://www.nih.gov/about/director/060399.htm
- Advanced Computational Structural Genomics, http://cbcg.lbl.gov/ssi-csb/Meso.html
- Presentation by Gary Johnson, Oct 26, 2001 to the Office of Advanced Scientific Computing Research Advisory Committee, http://genomicsgtl.energy.gov/compbio/johnson.htm
