Homeodomain Proteins

All 1599 records in the database are displayed below. To narrow down the number of entries displayed, use the search engine on the HDR Home Page.

Clicking on the HDR number in the Detail column will display the sequence detail page for that particular homeodomain protein. Columns may be resorted by clicking on any of the column headers.

To obtain a FASTA-formatted list of sequences, click on the check-boxes next to the sequences of interest, make a selection from the pull-down menu at the top of the table, then click "Get". See the FASTA Specification page for an explanation of the structure of the definition lines.


Detail	RefSeq Protein	Entrez Gene Symbol	Entrez Gene Name	Organism	UniProt or Ensembl Entry
HDRp291	NP_056154	ADNP	activity-dependent neuroprotector homeobox	Homo sapiens	Q9H2P0 (UniProt)
HDRp292	NP_055728	ADNP2	ADNP homeobox 2	Homo sapiens
HDRp172	NP_008913	ALX1	ALX homeobox 1	Homo sapiens	Q15699 (UniProt)
HDRp173	NP_006483	ALX3	aristaless-like homeobox 3	Homo sapiens	O95076 (UniProt)
HDRp174	NP_068745	ALX4	aristaless-like homeobox 4	Homo sapiens	Q9H161 (UniProt)
HDRp175	NP_001012677	ARGFX	arginine-fifty homeobox	Homo sapiens
HDRp23		ARGFXP1	arginine-fifty homeobox pseudogene 1	Homo sapiens
HDRp24		ARGFXP2	arginine-fifty homeobox pseudogene 2	Homo sapiens
HDRp176	NP_620689	ARX	aristaless related homeobox	Homo sapiens	Q96QS3 (UniProt)
HDRp62	NP_064448	BARHL1	BarH-like homeobox 1	Homo sapiens	Q9BZE3 (UniProt)
HDRp63	NP_064447	BARHL2	BarH-like homeobox 2	Homo sapiens	Q9NY43 (UniProt)
HDRp64	NP_067545	BARX1	BARX homeobox 1	Homo sapiens	Q9HBU1 (UniProt)
HDRp65	NP_003649	BARX2	BARX homeobox 2	Homo sapiens	Q9UMQ3 (UniProt)
HDRp66	NP_001091639	BSX	brain-specific homeobox	Homo sapiens
HDRp1	NP_001795	CDX1	caudal type homeobox 1	Homo sapiens	P47902 (UniProt)
HDRp2	NP_001256	CDX2	caudal type homeobox 2	Homo sapiens	Q99626 (UniProt)
HDRp3	NP_005184	CDX4	caudal type homeobox 4	Homo sapiens	O14627 (UniProt)
HDRp203	NP_000545	CRX	cone-rod homeobox	Homo sapiens	O43186 (UniProt)
HDRp285	NP_853530	CUX1	cut-like homeobox 1	Homo sapiens	P39880 (UniProt)
HDRp286	NP_056082	CUX2	cut-like homeobox 2	Homo sapiens	O14529 (UniProt)
HDRp299		CUX2P1	cut-like homeobox 2 pseudogene 1	Homo sapiens
HDRp300		CUX2P2	cut-like homeobox 2 pseudogene 2	Homo sapiens
HDRp67	EAW68342	DBX1	developing brain homeobox 1	Homo sapiens
HDRp68	NP_001004329	DBX2	developing brain homeobox 2	Homo sapiens
HDRp8	NP_835221	DLX1	distal-less homeobox 1	Homo sapiens	P56177 (UniProt)
HDRp69	NP_004396	DLX2	distal-less homeobox 2	Homo sapiens	Q07687 (UniProt)
HDRp70	NP_005211	DLX3	distal-less homeobox 3	Homo sapiens	O60479 (UniProt)
HDRp71	NP_612138	DLX4	distal-less homeobox 4	Homo sapiens	Q92988 (UniProt)
HDRp72	NP_005212	DLX5	distal-less homeobox 5	Homo sapiens	P56178 (UniProt)
HDRp73	NP_005213	DLX6	distal-less homeobox 6	Homo sapiens	P56179 (UniProt)
HDRp177	NP_671725	DMBX1	diencephalon/mesencephalon homeobox 1	Homo sapiens
HDRp178	NP_001012746	DPRX	divergent-paired related homeobox	Homo sapiens
HDRp25		DPRXP1	divergent-paired related homeobox pseudogene 1	Homo sapiens
HDRp26		DPRXP2	divergent-paired related homeobox pseudogene 2	Homo sapiens
HDRp179		DPRXP3	divergent-paired related homeobox pseudogene 3	Homo sapiens
HDRp27		DPRXP4	divergent-paired related homeobox pseudogene 4	Homo sapiens
HDRp180		DPRXP5	divergent-paired related homeobox pseudogene 5	Homo sapiens
HDRp181		DPRXP6	divergent-paired related homeobox pseudogene 6	Homo sapiens
HDRp28		DPRXP7	divergent-paired related homeobox pseudogene 7	Homo sapiens
HDRp182	NP_001073989	DRGX	dorsal root ganglia homeobox	Homo sapiens
HDRp183	NP_001012747	DUXA	double homeobox A	Homo sapiens
HDRp29		DUXAP1	double homeobox A pseudogene 1	Homo sapiens
HDRp190		DUXAP10	double homeobox A pseudogene 10	Homo sapiens
HDRp184		DUXAP2	double homeobox A pseudogene 2	Homo sapiens
HDRp185		DUXAP3	double homeobox A pseudogene 3	Homo sapiens
HDRp186		DUXAP4	double homeobox A pseudogene 4	Homo sapiens
HDRp30		DUXAP5	double homeobox A pseudogene 5	Homo sapiens
HDRp187		DUXAP6	double homeobox A pseudogene 6	Homo sapiens
HDRp188		DUXAP7	double homeobox A pseudogene 7	Homo sapiens
HDRp31		DUXAP8	double homeobox A pseudogene 8	Homo sapiens
HDRp189		DUXAP9	double homeobox A pseudogene 9	Homo sapiens
HDRp32		DUXB	double homeobox B	Homo sapiens
HDRp74	NP_004088	EMX1	empty spiracles homeobox 1	Homo sapiens	Q04741 (UniProt)
HDRp75	NP_004089	EMX2	empty spiracles homeobox 2	Homo sapiens	Q04743 (UniProt)
HDRp76	NP_001417	EN1	engrailed homeobox 1	Homo sapiens	Q05925 (UniProt)
HDRp77	NP_001418	EN2	engrailed homeobox 2	Homo sapiens	P19622 (UniProt)
HDRp191	NP_703149	ESX1	ESX homeobox 1	Homo sapiens	Q8N693 (UniProt)
HDRp4	NP_001980	EVX1	even-skipped homeobox 1	Homo sapiens	P49640 (UniProt)
HDRp5	NP_001073927	EVX2	even-skipped homeobox 2	Homo sapiens	Q03828 (UniProt)
HDRp90	NP_001092304	GBX1	gastrulation brain homeobox 1	Homo sapiens
HDRp91	NP_001476	GBX2	gastrulation brain homeobox 2	Homo sapiens	P52951 (UniProt)
HDRp192	NP_776248	GSC	goosecoid homeobox	Homo sapiens	P56915 (UniProt)
HDRp193	NP_005306	GSC2	goosecoid homeobox 2	Homo sapiens	O15499 (UniProt)
HDRp6	NP_663632	GSX1	GS homeobox 1	Homo sapiens	Q9H4S2 (UniProt)
HDRp92	NP_573574	GSX2	GS homeobox 2	Homo sapiens	Q9BZM3 (UniProt)
HDRp244	NP_653258	HDX	highly divergent homeobox	Homo sapiens
HDRp194	NP_003856	HESX1	HESX homeobox 1	Homo sapiens	Q9UBX0 (UniProt)
HDRp78	NP_002720	HHEX	hematopoietically expressed homeobox	Homo sapiens	Q03014 (UniProt)
HDRp79	NP_068777	HLX	H2.0-like homeobox	Homo sapiens	Q14774 (UniProt)
HDRp136	NP_078843	HMBOX1	homeobox containing 1	Homo sapiens
HDRp158	NP_061815	HMX1	H6 family homeobox 1	Homo sapiens
HDRp159	NP_005510	HMX2	H6 family homeobox 2	Homo sapiens
HDRp160	XP_291716	HMX3	H6 family homeobox 3	Homo sapiens
HDRp137	NP_000536	HNF1A	HNF1 homeobox A	Homo sapiens	P20823 (UniProt)
HDRp138	NP_000449	HNF1B	HNF1 homeobox B	Homo sapiens	P35680 (UniProt)
HDRp258	NP_065885	HOMEZ	homeobox and leucine zipper encoding	Homo sapiens	Q8IX15 (UniProt)
HDRp195	NP_115884	HOPX	HOP homeobox	Homo sapiens	Q9BPY8 (UniProt)
HDRp93	NP_005513	HOXA1	homeobox A1	Homo sapiens	P49639 (UniProt)
HDRp120	NP_061824	HOXA10	homeobox A10	Homo sapiens	P31260 (UniProt)
HDRp123	NP_005514	HOXA11	homeobox A11	Homo sapiens	P31270 (UniProt)
HDRp55	NP_000513	HOXA13	homeobox A13	Homo sapiens	P31271 (UniProt)
HDRp96	NP_006726	HOXA2	homeobox A2	Homo sapiens	O43364 (UniProt)
HDRp98	NP_109377	HOXA3	homeobox A3	Homo sapiens	O43365 (UniProt)
HDRp101	NP_002132	HOXA4	homeobox A4	Homo sapiens	Q00056 (UniProt)
HDRp105	NP_061975	HOXA5	homeobox A5	Homo sapiens	P20719 (UniProt)
HDRp108	NP_076919	HOXA6	homeobox A6	Homo sapiens	P31267 (UniProt)
HDRp111	NP_008827	HOXA7	homeobox A7	Homo sapiens	P31268 (UniProt)
HDRp116	NP_689952	HOXA9	homeobox A9	Homo sapiens	P31269 (UniProt)
HDRp94	NP_002135	HOXB1	homeobox B1	Homo sapiens	P14653 (UniProt)
HDRp56	NP_006352	HOXB13	homeobox B13	Homo sapiens	Q92826 (UniProt)
HDRp97	NP_002136	HOXB2	homeobox B2	Homo sapiens	P14652 (UniProt)
HDRp99	NP_002137	HOXB3	homeobox B3	Homo sapiens	P14651 (UniProt)
HDRp102	NP_076920	HOXB4	homeobox B4	Homo sapiens	P17483 (UniProt)
HDRp106	NP_002138	HOXB5	homeobox B5	Homo sapiens	P09067 (UniProt)
HDRp109	NP_061825	HOXB6	homeobox B6	Homo sapiens	P17509 (UniProt)
HDRp112	NP_004493	HOXB7	homeobox B7	Homo sapiens	P09629 (UniProt)
HDRp113	NP_076921	HOXB8	homeobox B8	Homo sapiens	P17481 (UniProt)
HDRp117	NP_076922	HOXB9	homeobox B9	Homo sapiens	P17482 (UniProt)
HDRp121	NP_059105	HOXC10	homeobox C10	Homo sapiens	Q9NYD6 (UniProt)
HDRp124	NP_055027	HOXC11	homeobox C11	Homo sapiens	O43248 (UniProt)
HDRp53	NP_776272	HOXC12	homeobox C12	Homo sapiens	P31275 (UniProt)
HDRp57	NP_059106	HOXC13	homeobox C13	Homo sapiens	P31276 (UniProt)
HDRp103	NP_055435	HOXC4	homeobox C4	Homo sapiens	P09017 (UniProt)
HDRp107	NP_061826	HOXC5	homeobox C5	Homo sapiens	Q00444 (UniProt)
HDRp110	NP_004494	HOXC6	homeobox C6	Homo sapiens	P09630 (UniProt)
HDRp114	NP_073149	HOXC8	homeobox C8	Homo sapiens	P31273 (UniProt)
HDRp118	NP_008828	HOXC9	homeobox C9	Homo sapiens	P31274 (UniProt)
HDRp95	NP_078777	HOXD1	homeobox D1	Homo sapiens	Q9GZZ0 (UniProt)
HDRp122	NP_002139	HOXD10	homeobox D10	Homo sapiens	P28358 (UniProt)
HDRp125	NP_067015	HOXD11	homeobox D11	Homo sapiens	P31277 (UniProt)
HDRp54	NP_067016	HOXD12	homeobox D12	Homo sapiens	P35452 (UniProt)
HDRp58	NP_000514	HOXD13	homeobox D13	Homo sapiens	P35453 (UniProt)
HDRp100	NP_008829	HOXD3	homeobox D3	Homo sapiens	P31249 (UniProt)
HDRp104	NP_055436	HOXD4	homeobox D4	Homo sapiens	P09016 (UniProt)
HDRp115	NP_062458	HOXD8	homeobox D8	Homo sapiens	P13378 (UniProt)
HDRp119	NP_055028	HOXD9	homeobox D9	Homo sapiens	P28356 (UniProt)
HDRp145	NP_077313	IRX1	iroquois homeobox 1	Homo sapiens	P78414 (UniProt)
HDRp42		IRX1P1	iroquois homeobox 1 pseudogene 1	Homo sapiens
HDRp146	NP_150366	IRX2	iroquois homeobox 2	Homo sapiens	Q9BZI1 (UniProt)
HDRp147	NP_077312	IRX3	iroquois homeobox 3	Homo sapiens	P78415 (UniProt)
HDRp264	NP_057442	IRX4	iroquois homeobox 4	Homo sapiens	P78413 (UniProt)
HDRp43		IRX4P1	iroquois homeobox 4 pseudogene 1	Homo sapiens
HDRp265	NP_005844	IRX5	iroquois homeobox 5	Homo sapiens	P78411 (UniProt)
HDRp266	NP_077311	IRX6	iroquois homeobox 6	Homo sapiens	P78412 (UniProt)
HDRp232	NP_002193	ISL1	ISL LIM homeobox 1	Homo sapiens	P61371 (UniProt)
HDRp233	NP_665804	ISL2	ISL LIM homeobox 2	Homo sapiens	Q96A47 (UniProt)
HDRp196	NP_001008494	ISX	intestine-specific homeobox	Homo sapiens
HDRp259	NP_859530	LASS2	LAG1 homolog, ceramide synthase 2	Homo sapiens	Q96G23 (UniProt)
HDRp260	NP_849164	LASS3	LAG1 homolog, ceramide synthase 3	Homo sapiens	Q8IU89 (UniProt)
HDRp261	NP_078828	LASS4	LAG1 homolog, ceramide synthase 4	Homo sapiens	Q9HA82 (UniProt)
HDRp262	NP_671723	LASS5	LAG1 homolog, ceramide synthase 5	Homo sapiens	Q8N5B7 (UniProt)
HDRp263	NP_982288	LASS6	LAG1 homolog, ceramide synthase 6	Homo sapiens	Q6ZMG9 (UniProt)
HDRp80	NP_006553	LBX1	ladybird homeobox 1	Homo sapiens	P52954 (UniProt)
HDRp81	NP_001009812	LBX2	ladybird homeobox 2	Homo sapiens
HDRp197	EAW56915	LEUTX	leucine twenty homeobox	Homo sapiens
HDRp234	NP_005559	LHX1	LIM homeobox 1	Homo sapiens	P48742 (UniProt)
HDRp236	NP_004780	LHX2	LIM homeobox 2	Homo sapiens	P50458 (UniProt)
HDRp238	NP_055379	LHX3	LIM homeobox 3	Homo sapiens	Q9UBR4 (UniProt)
HDRp239	NP_203129	LHX4	LIM homeobox 4	Homo sapiens	Q969G2 (UniProt)
HDRp235	NP_071758	LHX5	LIM homeobox 5	Homo sapiens	Q9H2C1 (UniProt)
HDRp240	NP_055183	LHX6	LIM homeobox 6	Homo sapiens	Q9UPM6 (UniProt)
HDRp241	NP_001001933	LHX8	LIM homeobox 8	Homo sapiens
HDRp237	NP_064589	LHX9	LIM homeobox 9	Homo sapiens	Q9NQ69 (UniProt)
HDRp242	NP_796372	LMX1A	LIM homeobox transcription factor 1, alpha	Homo sapiens	Q8TE12 (UniProt)
HDRp243	NP_002307	LMX1B	LIM homeobox transcription factor 1, beta	Homo sapiens	O60663 (UniProt)
HDRp267	NP_002389	MEIS1	Meis homeobox 1	Homo sapiens	O00470 (UniProt)
HDRp268	NP_733777	MEIS2	Meis homeobox 2	Homo sapiens	O14770 (UniProt)
HDRp269	NP_001009813	MEIS3	Meis homeobox 3	Homo sapiens	Q99687 (UniProt)
HDRp270		MEIS3P1	Meis homeobox 3 pseudogene 1	Homo sapiens
HDRp44		MEIS3P2	Meis homeobox 3 pseudogene 2	Homo sapiens
HDRp7	NP_004518	MEOX1	mesenchyme homeobox 1	Homo sapiens	P50221 (UniProt)
HDRp60	NP_005915	MEOX2	mesenchyme homeobox 2	Homo sapiens	P50222 (UniProt)
HDRp198	NP_114150	MIXL1	Mix1 homeobox-like 1 (Xenopus laevis)	Homo sapiens
HDRp271	NP_775847	MKX	mohawk homeobox	Homo sapiens
HDRp59	NP_005506	MNX1	motor neuron and pancreas homeobox 1	Homo sapiens	P50219 (UniProt)
HDRp82	NP_002439	MSX1	msh homeobox 1	Homo sapiens	P28360 (UniProt)
HDRp83	NP_002440	MSX2	msh homeobox 2	Homo sapiens	P35548 (UniProt)
HDRp9		MSX2P1	msh homeobox 2 pseudogene 1	Homo sapiens
HDRp84	NP_079141	NANOG	Nanog homeobox	Homo sapiens
HDRp85		NANOGP1	Nanog homeobox pseudogene 1	Homo sapiens
HDRp15		NANOGP10	Nanog homeobox pseudogene 10	Homo sapiens
HDRp89		NANOGP11	Nanog homeobox pseudogene 11	Homo sapiens
HDRp10		NANOGP2	Nanog homeobox pseudogene 2	Homo sapiens
HDRp11		NANOGP3	Nanog homeobox pseudogene 3	Homo sapiens
HDRp12		NANOGP4	Nanog homeobox pseudogene 4	Homo sapiens
HDRp13		NANOGP5	Nanog homeobox pseudogene 5	Homo sapiens
HDRp86		NANOGP6	Nanog homeobox pseudogene 6	Homo sapiens
HDRp14		NANOGP7	Nanog homeobox pseudogene 7	Homo sapiens
HDRp87		NANOGP8	Nanog homeobox pseudogene 8	Homo sapiens
HDRp88		NANOGP9	Nanog homeobox pseudogene 9	Homo sapiens
HDRp149	XP_372331	NKX1-2	NK1 homeobox 2	Homo sapiens
HDRp150	NP_001073136	NKX2-1	NK2 homeobox 1	Homo sapiens	P43699 (UniProt)
HDRp151	NP_002500	NKX2-2	NK2 homeobox 2	Homo sapiens	O95096 (UniProt)
HDRp155	NP_660328	NKX2-3	NK2 transcription factor related, locus 3 (Drosophila)	Homo sapiens	Q8TAU0 (UniProt)
HDRp16	NP_149416	NKX2-4	NK2 homeobox 4	Homo sapiens	Q9H2Z4 (UniProt)
HDRp156	NP_004378	NKX2-5	NK2 transcription factor related, locus 5 (Drosophila)	Homo sapiens	P52952 (UniProt)
HDRp157	XP_070619	NKX2-6	NK2 transcription factor related, locus 6 (Drosophila)	Homo sapiens
HDRp152	NP_055175	NKX2-8	NK2 homeobox 8	Homo sapiens	O15522 (UniProt)
HDRp153	NP_006158	NKX3-1	NK3 homeobox 1	Homo sapiens	Q99801 (UniProt)
HDRp154	NP_001180	NKX3-2	NK3 homeobox 2	Homo sapiens	P78367 (UniProt)
HDRp161	NP_006159	NKX6-1	NK6 homeobox 1	Homo sapiens	P78426 (UniProt)
HDRp162	NP_796374	NKX6-2	NK6 homeobox 2	Homo sapiens
HDRp163	EAW63251	NKX6-3	NK6 homeobox 3	Homo sapiens
HDRp199	O60393	NOBOX	NOBOX oogenesis homeobox	Homo sapiens
HDRp164	XP_292889	NOTO	notochord homeobox	Homo sapiens
HDRp282	NP_004489	ONECUT1	one cut homeobox 1	Homo sapiens	Q9UBC0 (UniProt)
HDRp283	NP_004843	ONECUT2	one cut homeobox 2	Homo sapiens	O95948 (UniProt)
HDRp284	NP_001073957	ONECUT3	one cut homeobox 3	Homo sapiens
HDRp200	NP_115485	OTP	orthopedia homeobox	Homo sapiens
HDRp201	NP_055377	OTX1	orthodenticle homeobox 1	Homo sapiens	P32242 (UniProt)
HDRp202	NP_068374	OTX2	orthodenticle homeobox 2	Homo sapiens	P32243 (UniProt)
HDRp33		OTX2P1	orthodenticle homeobox 2 pseudogene 1	Homo sapiens
HDRp204	NP_003981	PAX2	paired box 2	Homo sapiens
HDRp207	NP_001120838	PAX3	paired box 3	Homo sapiens	P23760 (UniProt)
HDRp209	NP_006184	PAX4	paired box 4	Homo sapiens	O43316 (UniProt)
HDRp205	NP_057953	PAX5	paired box 5	Homo sapiens
HDRp210	NP_001595	PAX6	paired box 6	Homo sapiens	P26367 (UniProt)
HDRp208	NP_002575	PAX7	paired box 7	Homo sapiens	P23759 (UniProt)
HDRp206	NP_003457	PAX8	paired box 8	Homo sapiens
HDRp272	NP_002576	PBX1	pre-B-cell leukemia homeobox 1	Homo sapiens	P40424 (UniProt)
HDRp273	NP_002577	PBX2	pre-B-cell leukemia homeobox 2	Homo sapiens	P40425 (UniProt)
HDRp45		PBX2P1	pre-B-cell leukemia homeobox 2 pseudogene 1	Homo sapiens
HDRp274	NP_006186	PBX3	pre-B-cell leukemia homeobox 3	Homo sapiens	P40426 (UniProt)
HDRp275	NP_079521	PBX4	pre-B-cell leukemia homeobox 4	Homo sapiens
HDRp61	NP_000200	PDX1	pancreatic and duodenal homeobox 1	Homo sapiens	P52945 (UniProt)
HDRp211	NP_005160	PHOX2A	paired-like homeobox 2a	Homo sapiens	O14813 (UniProt)
HDRp212	NP_003915	PHOX2B	paired-like homeobox 2b	Homo sapiens	Q99453 (UniProt)
HDRp213	NP_002644	PITX1	paired-like homeodomain 1	Homo sapiens	P78337 (UniProt)
HDRp214	NP_000316	PITX2	paired-like homeodomain 2	Homo sapiens	Q99697 (UniProt)
HDRp215	NP_005020	PITX3	paired-like homeodomain 3	Homo sapiens	O75364 (UniProt)
HDRp276	NP_004562	PKNOX1	PBX/knotted 1 homeobox 1	Homo sapiens	P55347 (UniProt)
HDRp277	NP_071345	PKNOX2	PBX/knotted 1 homeobox 2	Homo sapiens	Q96KN3 (UniProt)
HDRp245	NP_000297	POU1F1	POU class 1 homeobox 1	Homo sapiens	P28069 (UniProt)
HDRp246	NP_002688	POU2F1	POU class 2 homeobox 1	Homo sapiens	P14859 (UniProt)
HDRp247	NP_002689	POU2F2	POU class 2 homeobox 2	Homo sapiens	P09086 (UniProt)
HDRp248	NP_055167	POU2F3	POU class 2 homeobox 3	Homo sapiens	Q9UKI9 (UniProt)
HDRp249	NP_002690	POU3F1	POU class 3 homeobox 1	Homo sapiens	Q03052 (UniProt)
HDRp250	NP_005595	POU3F2	POU class 3 homeobox 2	Homo sapiens	P20265 (UniProt)
HDRp251	NP_006227	POU3F3	POU class 3 homeobox 3	Homo sapiens	P20264 (UniProt)
HDRp252	NP_000298	POU3F4	POU class 3 homeobox 4	Homo sapiens	P49335 (UniProt)
HDRp126	NP_006228	POU4F1	POU class 4 homeobox 1	Homo sapiens	Q01851 (UniProt)
HDRp127	NP_004566	POU4F2	POU class 4 homeobox 2	Homo sapiens	Q12837 (UniProt)
HDRp128	NP_002691	POU4F3	POU class 4 homeobox 3	Homo sapiens	Q15319 (UniProt)
HDRp129	NP_002692	POU5F1	POU class 5 homeobox 1	Homo sapiens	Q01860 (UniProt)
HDRp130	AF268618	POU5F1P1	POU class 5 homeobox 1 pseudogene 1	Homo sapiens	Q06416 (UniProt)
HDRp37		POU5F1P2	POU class 5 homeobox 1 pseudogene 2	Homo sapiens
HDRp131		POU5F1P3	POU class 5 homeobox 1 pseudogene 3	Homo sapiens
HDRp132	AF268613	POU5F1P4	POU class 5 homeobox 1 pseudogene 4	Homo sapiens	Q9BZW0 (UniProt)
HDRp38		POU5F1P5	POU class 5 homeobox 1 pseudogene 5	Homo sapiens
HDRp39		POU5F1P6	POU class 5 homeobox 1 pseudogene 6	Homo sapiens
HDRp40		POU5F1P7	POU class 5 homeobox 1 pseudogene 7	Homo sapiens
HDRp41		POU5F1P8	POU class 5 homeobox 1 pseudogene 8	Homo sapiens
HDRp133	NP_694948	POU5F2	POU domain class 5, transcription factor 2	Homo sapiens	Q8N7G0 (UniProt)
HDRp134	NP_002693	POU6F1	POU class 6 homeobox 1	Homo sapiens	Q14863 (UniProt)
HDRp135	NP_009183	POU6F2	POU class 6 homeobox 2	Homo sapiens	P78424 (UniProt)
HDRp216	NP_006252	PROP1	PROP paired-like homeobox 1	Homo sapiens	O75360 (UniProt)
HDRp289	NP_002754	PROX1	prospero homeobox 1	Homo sapiens	Q92786 (UniProt)
HDRp290	NP_001073877	PROX2	prospero homeobox 2	Homo sapiens
HDRp217	NP_073207	PRRX1	paired related homeobox 1	Homo sapiens	P54821 (UniProt)
HDRp218	NP_057391	PRRX2	paired related homeobox 2	Homo sapiens	Q99811 (UniProt)
HDRp219	NP_038463	RAX	retina and anterior neural fold homeobox	Homo sapiens	Q9Y2V3 (UniProt)
HDRp220	NP_116142	RAX2	retina and anterior neural fold homeobox 2	Homo sapiens
HDRp221	NP_644811	RHOXF1	Rhox homeobox family, member 1	Homo sapiens	Q8NHV9 (UniProt)
HDRp222	NP_115887	RHOXF2	Rhox homeobox family, member 2	Homo sapiens	Q9BQY4 (UniProt)
HDRp223	NP_001093155	RHOXF2B	Rhox homeobox family, member 2B	Homo sapiens
HDRp287	NP_002962	SATB1	SATB homeobox 1	Homo sapiens	Q01826 (UniProt)
HDRp51		SATB1P1	SATB homeobox 1 pseudogene 1	Homo sapiens
HDRp288	NP_056080	SATB2	SATB homeobox 2	Homo sapiens	Q9UPW6 (UniProt)
HDRp224	NP_001074306	SEBOX	SEBOX homeobox	Homo sapiens
HDRp225	NP_000442	SHOX	short stature homeobox	Homo sapiens	O15266 (UniProt)
HDRp34	NP_006875	SHOX2	short stature homeobox 2	Homo sapiens	O60902 (UniProt)
HDRp139	NP_005973	SIX1	SIX homeobox 1	Homo sapiens	Q15475 (UniProt)
HDRp140	NP_058628	SIX2	SIX homeobox 2	Homo sapiens	Q9NPC8 (UniProt)
HDRp141	NP_005404	SIX3	SIX homeobox 3	Homo sapiens	O95343 (UniProt)
HDRp143	NP_059116	SIX4	SIX homeobox 4	Homo sapiens	Q9UIU6 (UniProt)
HDRp144	NP_787071	SIX5	SIX homeobox 5	Homo sapiens	Q8N196 (UniProt)
HDRp142	NP_031400	SIX6	SIX homeobox 6	Homo sapiens	O95475 (UniProt)
HDRp278	NP_733796	TGIF1	TGFB-induced factor homeobox 1	Homo sapiens	Q15583 (UniProt)
HDRp46		TGIF1P1	TGFB-induced factor homeobox 1 pseudogene 1	Homo sapiens
HDRp279	NP_068581	TGIF2	TGFB-induced factor homeobox 2	Homo sapiens	Q9GZN2 (UniProt)
HDRp280	NP_620410	TGIF2LX	TGFB-induced factor homeobox 2-like, X-linked	Homo sapiens	Q8IUE1 (UniProt)
HDRp281	NP_631960	TGIF2LY	TGFB-induced factor homeobox 2-like, Y-linked	Homo sapiens	Q8IUE0 (UniProt)
HDRp47		TGIF2P1	TGFB-induced factor homeobox 2 pseudogene 1	Homo sapiens
HDRp48		TGIF2P2	TGFB-induced factor homeobox 2 pseudogene 2	Homo sapiens
HDRp49		TGIF2P3	TGFB-induced factor homeobox 2 pseudogene 3	Homo sapiens
HDRp50		TGIF2P4	TGFB-induced factor homeobox 2 pseudogene 4	Homo sapiens
HDRp165	NP_005512	TLX1	T-cell leukemia homeobox 1	Homo sapiens	P31314 (UniProt)
HDRp166	NP_057254	TLX2	T-cell leukemia homeobox 2	Homo sapiens	O43763 (UniProt)
HDRp167	NP_066305	TLX3	T-cell leukemia homeobox 3	Homo sapiens	O43711 (UniProt)
HDRp226	EAW57514	TPRX1	tetra-peptide repeat homeobox 1	Homo sapiens
HDRp227		TPRX1P1	tetra-peptide repeat homeobox 1 pseudogene 1	Homo sapiens
HDRp36		TPRX1P2	tetra-peptide repeat homeobox 1 pseudogene 2	Homo sapiens
HDRp35		TPRX2P	tetra-peptide repeat homeobox 2 pseudogene	Homo sapiens
HDRp228		TPRXL	tetra-peptide repeat homeobox-like	Homo sapiens
HDRp293	NP_005777	TSHZ1	teashirt zinc finger homeobox 1	Homo sapiens
HDRp294	NP_775756	TSHZ2	teashirt zinc finger homeobox 2	Homo sapiens
HDRp295	NP_065907	TSHZ3	teashirt zinc finger homeobox 3	Homo sapiens
HDRp229	NP_001073930	UNCX	UNC homeobox	Homo sapiens
HDRp168	CAI14825	VAX1	ventral anterior homeobox 1	Homo sapiens
HDRp169	NP_036608	VAX2	ventral anterior homeobox 2	Homo sapiens	Q9UIW0 (UniProt)
HDRp170	NP_055283	VENTX	VENT homeobox homolog (Xenopus laevis)	Homo sapiens
HDRp17		VENTXP1	VENT homeobox (Xenopus laevis) pseudogene 1	Homo sapiens
HDRp18		VENTXP2	VENT homeobox (Xenopus laevis) pseudogene 2	Homo sapiens
HDRp19		VENTXP3	VENT homeobox (Xenopus laevis) pseudogene 3	Homo sapiens
HDRp20		VENTXP4	VENT homeobox (Xenopus laevis) pseudogene 4	Homo sapiens
HDRp21		VENTXP5	VENT homeobox (Xenopus laevis) pseudogene 5	Homo sapiens
HDRp22		VENTXP6	VENT homeobox (Xenopus laevis) pseudogene 6	Homo sapiens
HDRp171		VENTXP7	VENT homeobox (Xenopus laevis) pseudogene 7	Homo sapiens
HDRp230	NP_055403	VSX1	visual system homeobox 1	Homo sapiens	Q9NZR4 (UniProt)
HDRp231	NP_878314	VSX2	visual system homeobox 2	Homo sapiens	P58304 (UniProt)
HDRp296	NP_110378	ZEB1	zinc finger E-box binding homeobox 1	Homo sapiens	P37275 (UniProt)
HDRp297	NP_055610	ZEB2	zinc finger E-box binding homeobox 2	Homo sapiens	O60315 (UniProt)
HDRp52		ZEB2P1	zinc finger E-box binding homeobox 2 pseudogene 1	Homo sapiens
HDRp298	NP_207646	ZFHX2	zinc finger homeobox 2	Homo sapiens	Q9C0A1 (UniProt)
HDRp253	NP_008816	ZFHX3	zinc finger homeobox 3	Homo sapiens	Q15911 (UniProt)
HDRp254	NP_078997	ZFHX4	zinc finger homeobox 4	Homo sapiens
HDRp255	NP_001017926	ZHX1	zinc fingers and homeoboxes 1	Homo sapiens	Q9UKY1 (UniProt)
HDRp256	NP_055758	ZHX2	zinc fingers and homeoboxes 2	Homo sapiens	Q9Y6X8 (UniProt)
HDRp257	NP_055850	ZHX3	zinc fingers and homeoboxes 3	Homo sapiens	Q9H4I2 (UniProt)
HDRp1592	NP_567183	ANL2		Arabidopsis thaliana
HDRp551	NP_188582	AT3G19510		Arabidopsis thaliana	Q04996 (UniProt)
HDRp546	NP_195024	ATH1		Arabidopsis thaliana	P48731 (UniProt)
HDRp1607	NP_186796	ATHB-1		Arabidopsis thaliana
HDRp1628	NP_191748	ATHB-12		Arabidopsis thaliana
HDRp1641	NP_849795	ATHB-15		Arabidopsis thaliana
HDRp1637	NP_195716	ATHB-16/ATHB16		Arabidopsis thaliana
HDRp1585	NP_193411	ATHB-2		Arabidopsis thaliana
HDRp1591	NP_568309	ATHB-3		Arabidopsis thaliana
HDRp1597	NP_182191	ATHB-7		Arabidopsis thaliana
HDRp1639	NP_195014	ATHB-8		Arabidopsis thaliana
HDRp1618	NP_177136	ATHB13		Arabidopsis thaliana
HDRp1615	NP_186771	ATHB20		Arabidopsis thaliana
HDRp1632	NP_179445	ATHB21/HB-2		Arabidopsis thaliana
HDRp1635	NP_178358	ATHB21/ZFHD4		Arabidopsis thaliana
HDRp1643	NP_850266	ATHB22		Arabidopsis thaliana
HDRp538	NP_194197	ATHB22/MEE68		Arabidopsis thaliana	Q9SB61 (UniProt)
HDRp1587	NP_568570	ATHB23		Arabidopsis thaliana
HDRp1602	NP_564268	ATHB23		Arabidopsis thaliana
HDRp542	NP_201344	ATHB25/ZFHD2		Arabidopsis thaliana	Q9FKP8 (UniProt)
HDRp1655	NP_190658	ATHB28		Arabidopsis thaliana
HDRp1642	NP_172896	ATHB31		Arabidopsis thaliana
HDRp1605	NP_565106	ATHB33		Arabidopsis thaliana
HDRp1606	NP_189534	ATHB34		Arabidopsis thaliana
HDRp1608	NP_195392	ATHB40/HB-5		Arabidopsis thaliana
HDRp1610	NP_001032151	ATHB5		Arabidopsis thaliana
HDRp1651	NP_195999	ATHB51/LMI1		Arabidopsis thaliana
HDRp1583	NP_200209	ATHB52		Arabidopsis thaliana
HDRp1586	NP_174025	ATHB54		Arabidopsis thaliana
HDRp547	NP_565536	ATHB6		Arabidopsis thaliana	P46668 (UniProt)
HDRp527	NP_001031692	ATML1		Arabidopsis thaliana	Q38887 (UniProt)
HDRp1652	NP_198957	BEL1		Arabidopsis thaliana
HDRp1656	NP_173400	BEL10/BLH10A		Arabidopsis thaliana
HDRp1648	NP_001031490	BLH1		Arabidopsis thaliana
HDRp1644	NP_195405	BLH2		Arabidopsis thaliana
HDRp1616	NP_001077827	BLH3		Arabidopsis thaliana
HDRp1638	NP_850044	BLH4		Arabidopsis thaliana
HDRp1663	NP_180290	BLH5		Arabidopsis thaliana
HDRp1631	NP_001119116	BLH6		Arabidopsis thaliana
HDRp1657	NP_179233	BLH7		Arabidopsis thaliana
HDRp1653	NP_180366	BLH8		Arabidopsis thaliana
HDRp1611	NP_567722	FWA		Arabidopsis thaliana
HDRp1600	NP_565223	GL2		Arabidopsis thaliana
HDRp1659	NP_193476	HAT1		Arabidopsis thaliana
HDRp1617	NP_196289	HAT14		Arabidopsis thaliana
HDRp1664	NP_199548	HAT2		Arabidopsis thaliana
HDRp1588	NP_195493	HAT22		Arabidopsis thaliana
HDRp1633	NP_191598	HAT3		Arabidopsis thaliana
HDRp1630	NP_179865	HAT9		Arabidopsis thaliana
HDRp1601	NP_174164	HB-1		Arabidopsis thaliana
HDRp1627	NP_195280	HB-4/WOX13		Arabidopsis thaliana
HDRp1650	NP_199499	HB-7		Arabidopsis thaliana
HDRp1603	NP_201471	HB53		Arabidopsis thaliana
HDRp1619	NP_191674	HDG1		Arabidopsis thaliana
HDRp1660	NP_174724	HDG10		Arabidopsis thaliana
HDRp1612	NP_177479	HDG11		Arabidopsis thaliana
HDRp1590	NP_564041	HDG12		Arabidopsis thaliana
HDRp1620	NP_200030	HDG7		Arabidopsis thaliana
HDRp1647	NP_197234	HDG9		Arabidopsis thaliana
HDRp1629	NP_192555	KNAT1		Arabidopsis thaliana
HDRp1622	NP_177208	KNAT2		Arabidopsis thaliana
HDRp1593	NP_001031938	KNAT3		Arabidopsis thaliana
HDRp1621	NP_196667	KNAT4		Arabidopsis thaliana
HDRp1623	NP_194932	KNAT5		Arabidopsis thaliana
HDRp1662	NP_173752	KNAT6		Arabidopsis thaliana
HDRp1596	NP_564805	KNAT7		Arabidopsis thaliana
HDRp1636	NP_192165	LD		Arabidopsis thaliana
HDRp1609	NP_178252	LOC814671		Arabidopsis thaliana
HDRp1661	NP_180796	LOC817798		Arabidopsis thaliana
HDRp1614	NP_182018	LOC819100		Arabidopsis thaliana
HDRp1613	NP_187016	LOC821196		Arabidopsis thaliana
HDRp1626	NP_186976	LOC821305		Arabidopsis thaliana
HDRp1646	NP_193506	LOC827492		Arabidopsis thaliana
HDRp1645	NP_192234	LOC827999		Arabidopsis thaliana
HDRp1624	NP_199231	LOC834441		Arabidopsis thaliana
HDRp1658	NP_001117231	LOC839256		Arabidopsis thaliana
HDRp1589	NP_177248	LOC843431		Arabidopsis thaliana
HDRp1594	NP_177676	LOC843879		Arabidopsis thaliana
HDRp1625	NP_195823	LSN		Arabidopsis thaliana
HDRp1599	NP_196688	OCP3		Arabidopsis thaliana
HDRp1654	NP_567274	PDF2		Arabidopsis thaliana
HDRp1604	NP_181018	PHB		Arabidopsis thaliana
HDRp1584	NP_174337	PHV		Arabidopsis thaliana
HDRp1640	NP_194723	PRHA		Arabidopsis thaliana
HDRp1634	NP_200877	REV		Arabidopsis thaliana
HDRp1598	NP_176426	STM		Arabidopsis thaliana
HDRp1649	NP_173494	WOX10		Arabidopsis thaliana
HDRp1595	NP_173493	WOX14		Arabidopsis thaliana
HDRp1525	XP_682597	LOC2867785		Aspergillus nidulans
HDRp1526	XP_662652	LOC2872845		Aspergillus nidulans
HDRp1529	XP_660295	LOC2874370		Aspergillus nidulans
HDRp1528	XP_659624	LOC2875375		Aspergillus nidulans
HDRp1527	XP_658489	LOC2876659		Aspergillus nidulans
HDRp1530	XP_658821	LOC2876995		Aspergillus nidulans
HDRp1512	XP_001389780	LOC4978212		Aspergillus niger
HDRp1510	XP_001399958	LOC4979315		Aspergillus niger
HDRp1511	XP_001392374	LOC4982571		Aspergillus niger
HDRp1514	XP_001396098	LOC4986405		Aspergillus niger
HDRp1509	XP_001400681	LOC4986906		Aspergillus niger
HDRp1508	XP_001398599	LOC4989699		Aspergillus niger
HDRp1515	XP_001402033	LOC4991076		Aspergillus niger
HDRp1513	XP_001402056	LOC4991099		Aspergillus niger
HDRp1669	NP_495392	Homeobox		Caenorhabditis elegans
HDRp1689	NP_508669	LIM-homeodomain		Caenorhabditis elegans
HDRp1676	NP_490781	LOC171670		Caenorhabditis elegans
HDRp1724	NP_490803	LOC171679		Caenorhabditis elegans
HDRp1705	NP_494032	LOC173537		Caenorhabditis elegans
HDRp1754	NP_494062	LOC173541		Caenorhabditis elegans
HDRp1748	NP_494274	LOC173597		Caenorhabditis elegans
HDRp1733	NP_001022429	LOC174894		Caenorhabditis elegans
HDRp1674	NP_499503	LOC176594		Caenorhabditis elegans
HDRp1735	NP_503081	LOC178514		Caenorhabditis elegans
HDRp1759	NP_508095	LOC180394		Caenorhabditis elegans
HDRp1709	NP_510356	LOC181523		Caenorhabditis elegans
HDRp1721	NP_496232	LOC182370		Caenorhabditis elegans
HDRp1699	NP_496234	LOC182371		Caenorhabditis elegans
HDRp1702	NP_500361	LOC182467		Caenorhabditis elegans
HDRp1730	NP_494148	LOC183364		Caenorhabditis elegans
HDRp1751	NP_494332	LOC185241		Caenorhabditis elegans
HDRp1684	NP_494060	LOC185767		Caenorhabditis elegans
HDRp1692	NP_496326	LOC187642		Caenorhabditis elegans
HDRp1700	NP_509037	LOC188474		Caenorhabditis elegans
HDRp1711	NP_001022352	LOC188680		Caenorhabditis elegans
HDRp1706	NP_496116	LOC190204		Caenorhabditis elegans
HDRp1742	NP_506511	LOC191149		Caenorhabditis elegans
HDRp1697	NP_001024824	LOC3565071		Caenorhabditis elegans
HDRp1713	NP_001123094	LOC6418830		Caenorhabditis elegans
HDRp1712	NP_509860	alr-1	AristaLess (Drosophila homeodomain) Related	Caenorhabditis elegans
HDRp1741	NP_508796	ceh-1	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1717	NP_498251	ceh-10	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1691	NP_491693	ceh-12	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1679	NP_498655	ceh-13	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1708	NP_509273	ceh-14	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1752	NP_498898	ceh-16	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1739	NP_491393	ceh-17	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1750	NP_741758	ceh-18	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1690	NP_001023142	ceh-19	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1665	NP_491746	ceh-2	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1678	NP_001022555	ceh-20	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1698	NP_001076744	ceh-22	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1671	NP_498700	ceh-23	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1722	NP_506419	ceh-24	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1695	NP_505952	ceh-27	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1710	NP_510169	ceh-28	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1746	NP_508524	ceh-30	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1668	NP_508525	ceh-31	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1701	NP_505958	ceh-32	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1670	NP_504420	ceh-33	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1677	NP_504419	ceh-34	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1688	NP_510365	ceh-36	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1716	NP_510366	ceh-37	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1758	NP_741018	ceh-38	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1687	NP_510060	ceh-40	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1672	NP_508340	ceh-41	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1734	NP_497904	ceh-43	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1723	NP_497576	ceh-44	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1757	NP_490823	ceh-45	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1738	NP_501046	ceh-48	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1727	NP_504581	ceh-49	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1707	NP_492586	ceh-5	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1685	NP_492304	ceh-6	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1703	NP_509101	ceh-60	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1719	NP_495848	ceh-7	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1731	NP_492246	ceh-8	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1675	NP_001021797	ceh-9	C.Elegans Homeobox	Caenorhabditis elegans
HDRp1686	NP_001022264	cog-1	Connection Of Gonad defective	Caenorhabditis elegans
HDRp1728	NP_507685	dlx-1	DistalLess homeoboX protein family	Caenorhabditis elegans
HDRp1715	NP_510497	dsc-1	Defecation Suppressor of Clk-1	Caenorhabditis elegans
HDRp1667	NP_001024986	dve-1	DVE (Defective proVEntriculus in Drosophila) homolog	Caenorhabditis elegans
HDRp1718	NP_498697	egl-5	EGg Laying defective	Caenorhabditis elegans
HDRp1696	NP_508342	homeobox		Caenorhabditis elegans
HDRp1725	NP_508341	homeobox		Caenorhabditis elegans
HDRp1755	NP_492533	irx-1	IRoquois subclass of homeoboX	Caenorhabditis elegans
HDRp1736	NP_508204	lim-6	LIM domain family	Caenorhabditis elegans
HDRp1737	NP_491668	lim-7	LIM domain family	Caenorhabditis elegans
HDRp1693	NP_492696	lin-11	abnormal cell LINeage	Caenorhabditis elegans
HDRp1732	NP_001021164	lin-39	abnormal cell LINeage	Caenorhabditis elegans
HDRp1753	NP_498695	mab-5	Male ABnormal	Caenorhabditis elegans
HDRp1749	NP_001023112	mec-3	MEChanosensory abnormality	Caenorhabditis elegans
HDRp1740	NP_508815	mls-2	Mesodermal Lineage Specification	Caenorhabditis elegans
HDRp1666	NP_499575	nob-1	kNOB-like posterior (NO Backside)	Caenorhabditis elegans
HDRp1714	NP_001021210	pal-1	Posterior ALae in males	Caenorhabditis elegans
HDRp1704	NP_496189	pax-3	PAX (Paired box) transcription factor	Caenorhabditis elegans
HDRp1681	NP_508131	pha-2	defective PHArynx development	Caenorhabditis elegans
HDRp1745	NP_499573	php-3	Posterior Hox gene Paralog	Caenorhabditis elegans
HDRp1743	NP_001024213	ttx-1	abnormal ThermoTaXis	Caenorhabditis elegans
HDRp1726	NP_509970	ttx-3	abnormal ThermoTaXis	Caenorhabditis elegans
HDRp1756	NP_001021276	unc-30	UNCoordinated	Caenorhabditis elegans
HDRp1673	NP_506563	unc-39	UNCoordinated	Caenorhabditis elegans
HDRp1744	NP_496138	unc-4	UNCoordinated	Caenorhabditis elegans
HDRp1720	NP_505519	unc-42	UNCoordinated	Caenorhabditis elegans
HDRp1683	NP_001024175	unc-62	UNCoordinated	Caenorhabditis elegans
HDRp1729	NP_498795	unc-86	UNCoordinated	Caenorhabditis elegans
HDRp1682	NP_509648	vab-15	Variable ABnormal morphology	Caenorhabditis elegans
HDRp1747	NP_001024572	vab-3	Variable ABnormal morphology	Caenorhabditis elegans
HDRp1680	NP_499401	vab-7	Variable ABnormal morphology	Caenorhabditis elegans
HDRp1694	NP_500424	zag-1	Zinc finger plus homeodomain, Axon Guidance	Caenorhabditis elegans
HDRp1536	XP_001220031	LOC4386263		Chaetomium globosum
HDRp1531	XP_001221074	LOC4386321		Chaetomium globosum
HDRp1533	XP_001230044	LOC4388533		Chaetomium globosum
HDRp1532	XP_001228938	LOC4389153		Chaetomium globosum
HDRp1534	XP_001223987	LOC4391905		Chaetomium globosum
HDRp1535	XP_001225234	LOC4393965		Chaetomium globosum
HDRp1538	XP_001239450	LOC4558636		Coccidioides immitis
HDRp1537	XP_001240013	LOC4558972		Coccidioides immitis
HDRp1539	XP_001239344	LOC4559010		Coccidioides immitis
HDRp1541	XP_001241473	LOC4560545		Coccidioides immitis
HDRp1542	XP_001242193	LOC4562308		Coccidioides immitis
HDRp1540	XP_001243887	LOC4563546		Coccidioides immitis
HDRp1543	XP_001248634	LOC4565750		Coccidioides immitis
HDRp1553	XP_001829072	LOC6005498		Coprinopsis cinerea
HDRp1549	XP_001829148	LOC6005574		Coprinopsis cinerea
HDRp1545	XP_001829150	LOC6005576		Coprinopsis cinerea
HDRp1554	XP_001829153	LOC6005579		Coprinopsis cinerea
HDRp1548	XP_001829154	LOC6005580		Coprinopsis cinerea
HDRp1552	XP_001829287	LOC6005715		Coprinopsis cinerea
HDRp1550	XP_001829433	LOC6005862		Coprinopsis cinerea
HDRp1551	XP_001830326	LOC6006765		Coprinopsis cinerea
HDRp1544	XP_001830355	LOC6006795		Coprinopsis cinerea
HDRp1546	XP_001836005	LOC6012545		Coprinopsis cinerea
HDRp1547	XP_001838208	LOC6014781		Coprinopsis cinerea
HDRp535				Coturnix japonica	P47238 (UniProt)
HDRp1202	NP_001119883	CH211-134K13.1		Danio rerio	ENSDARG00000025891 (Ensembl)
HDRp1150		LOC100000124	similar to trh1 protein	Danio rerio
HDRp1211	XP_001336707	LOC100001076		Danio rerio	ENSDARG00000070955 (Ensembl)
HDRp1235		LOC100003863	prox1-like	Danio rerio	ENSDARG00000041952 (Ensembl)
HDRp1213	XP_001340552	LOC100006886		Danio rerio	ENSDARG00000055162 (Ensembl)
HDRp1192	XP_001346033	LOC100007620		Danio rerio	ENSDARG00000015073 (Ensembl)
HDRp1185	XP_001921358	LOC100008066	similar to T-cell leukemia, homeobox 3b	Danio rerio	ENSDARG00000006503 (Ensembl)
HDRp1229	XP_001923927	LOC100149566	similar to Mxtx1 protein	Danio rerio	ENSDARG00000027205 (Ensembl)
HDRp1173	XP_001919624	LOC100150137	similar to paired box 3	Danio rerio	ENSDARG00000028348 (Ensembl)
HDRp1119	NP_001122295	LOC100150826	similar to engrailed 2a	Danio rerio	P09015 (UniProt)
HDRp1090	XP_001923434	LOC100150870	similar to bonnie and clyde	Danio rerio	ENSDARG00000009737 (Ensembl)
HDRp1159	XP_690697	LOC407678		Danio rerio	ENSDARG00000029117 (Ensembl)
HDRp1114	XP_692775	LOC564343		Danio rerio	ENSDARG00000027726 (Ensembl)
HDRp1123	XP_693238	LOC564816		Danio rerio	ENSDARG00000018913 (Ensembl)
HDRp1248	XP_693668	LOC565295	similar to LAG1 homolog, ceramide synthase 2	Danio rerio
HDRp1133	XP_694172	LOC565811		Danio rerio	ENSDARG00000015959 (Ensembl)
HDRp1096	XP_001330865	LOC791785		Danio rerio	ENSDARG00000021055 (Ensembl)
HDRp1135	XP_001331437	LOC791787		Danio rerio	ENSDARG00000017615 (Ensembl)
HDRp1144	XP_001331441	LOC791806		Danio rerio	ENSDARG00000025899 (Ensembl)
HDRp1215	XP_001335045	LOC796944		Danio rerio	ENSDARG00000011259 (Ensembl)
HDRp1115	XP_001336565	LOC798510		Danio rerio	ENSDARG00000020961 (Ensembl)
HDRp1216	NP_571459	arx	aristaless related homeobox	Danio rerio	O42115 (UniProt)
HDRp1199	XP_682832	barhl1.1	BarH-like 1.1	Danio rerio	ENSDARG00000019013 (Ensembl)
HDRp1223	NP_001017712	barhl1.2	BarH-like 1.2	Danio rerio	ENSDARG00000035508 (Ensembl)
HDRp1222	NP_991303	barhl2	BarH-like 2	Danio rerio	ENSDARG00000070129 (Ensembl)
HDRp1125	NP_001020120	barx1	BarH-like homeobox 1	Danio rerio	ENSDARG00000007407 (Ensembl)
HDRp1095	XP_688124	brn1.2	brain POU domain gene 1.2	Danio rerio	ENSDARG00000023662 (Ensembl)
HDRp1228	NP_999892	bsx	brain specific homeobox	Danio rerio	Q6R3Q6 (UniProt)
HDRp1217	NP_997886	cdv3	carnitine deficiency-associated gene expressed in ventricle 3	Danio rerio	Q7T370 (UniProt)
HDRp1168	NP_694419	crx	cone-rod homeobox	Danio rerio	ENSDARG00000011989 (Ensembl)
HDRp1140	NP_571233	dbx1a	developing brain homeobox 1a	Danio rerio	Q9PTU1 (UniProt)
HDRp1197	NP_571253	dbx1b	developing brain homeobox 1b	Danio rerio	Q9PTU0 (UniProt)
HDRp1207	NP_571380	dlx1a	distal-less homeobox gene 1a	Danio rerio	Q98875 (UniProt)
HDRp1121	NP_571372	dlx2b	distal-less homeobox gene 2b	Danio rerio	Q98876 (UniProt)
HDRp1086	NP_571397	dlx3b	distal-less homeobox gene 3b	Danio rerio	Q01702 (UniProt)
HDRp1118	NP_571375	dlx4a	distal-less homeobox gene 4a	Danio rerio	Q98879 (UniProt)
HDRp1246	NP_571393	dlx4b	dlx4b distal-less homeobox gene 4b	Danio rerio	Q98878 (UniProt)
HDRp1149	NP_694509	dmbx1a	diencephalon/mesencephalon homeobox 1a	Danio rerio	Q8JI10 (UniProt)
HDRp1084	NP_001017625	dmbx1b	diencephalon/mesencephalon homeobox 1b	Danio rerio	Q566X8 (UniProt)
HDRp1108	NP_571354	emx3	empty spiracles homeobox 3	Danio rerio	ENSDARG00000020417 (Ensembl)
HDRp1088	NP_571120	eng1a	engrailed 1a	Danio rerio	Q04896 (UniProt)
HDRp1087	NP_571324	evx1	even-skipped homeobox 1	Danio rerio	ENSDARG00000005628 (Ensembl)
HDRp1139	NP_571130	flh	floating head	Danio rerio	ENSDARG00000021201 (Ensembl)
HDRp1218	NP_777286	gbx1	gastrulation brain homeobox 1	Danio rerio	ENSDARG00000071418 (Ensembl)
HDRp1180	NP_694496	gbx2	gastrulation brain homeo box 2	Danio rerio	ENSDARG00000002933 (Ensembl)
HDRp1190	NP_997866	hlx1	H2.0-like homeo box 1 (Drosophila)	Danio rerio	ENSDARG00000009134 (Ensembl)
HDRp1162	NP_001009887	hlxb9lb	homeo box HB9 like b	Danio rerio	ENSDARG00000030350 (Ensembl)
HDRp1206	NP_001025435	hmbox1	homeobox containing 1	Danio rerio	ENSDARG00000027082 (Ensembl)
HDRp1101	NP_001038836	hmx4	H6 family homeobox 4	Danio rerio	ENSDARG00000007941 (Ensembl)
HDRp1167	NP_739570	hnf1a	HNF1 homeobox a	Danio rerio	ENSDARG00000009470 (Ensembl)
HDRp1198	NP_571955	hnf1b	HNF1 homeobox b	Danio rerio	ENSDARG00000006615 (Ensembl)
HDRp1219	NP_001007121	homez	homeodomain leucine zipper gene	Danio rerio	ENSDARG00000054304 (Ensembl)
HDRp1170	NP_571230	hoxa10b	homeo box A10b	Danio rerio	Q8AWY2 (UniProt)
HDRp1181	NP_571619	hoxa11a	homeo box A11a	Danio rerio	Q9DDU0 (UniProt)
HDRp1113	NP_571222	hoxa11b	homeo box A11b	Danio rerio	Q9DDU1 (UniProt)
HDRp1091	NP_001078963	hoxa13a	homeo box A13a	Danio rerio	Q6W990 (UniProt)
HDRp1116	NP_571181	hoxa2b	homeo box A2b	Danio rerio	O42365 (UniProt)
HDRp1236	NP_571609	hoxa3a	homeo box A3a	Danio rerio	Q8AWZ2 (UniProt)
HDRp1153	NP_571615	hoxa5a	homeo box A5a	Danio rerio	Q9YGT6 (UniProt)
HDRp1098	NP_571607	hoxa9a	homeo box A9a	Danio rerio	Q9PWL6 (UniProt)
HDRp1172	XP_001336317	hoxb10a	homeo box B10a	Danio rerio	Q9PWL7 (UniProt)
HDRp1188	NP_571190	hoxb1a	homeo box B1a	Danio rerio	O42366 (UniProt)
HDRp1209	NP_571217	hoxb1b	homeo box B1b	Danio rerio	Q90423 (UniProt)
HDRp1200	NP_571193	hoxb4a	homeo box B4a	Danio rerio	P22574 (UniProt)
HDRp1129	NP_571176	hoxb5a	homeo box B5a	Danio rerio	P09014 (UniProt)
HDRp1242	NP_571612	hoxb5b	homeo box B5b	Danio rerio	P09013 (UniProt)
HDRp1163	NP_571194	hoxb6a	homeo box B6a	Danio rerio	P15861 (UniProt)
HDRp1127	XP_001335190	hoxb6b	homeo box B6b	Danio rerio	Q9YGT4 (UniProt)
HDRp1245	NP_001108563	hoxb7a	homeo box B7a	Danio rerio	Q8AWY9 (UniProt)
HDRp1241	XP_691976	hoxb8b	homeo box B8b	Danio rerio	Q8JH55 (UniProt)
HDRp1244	NP_571196	hoxb9a	homeo box B9a	Danio rerio	Q9PWM2 (UniProt)
HDRp1147	XP_001333647	im:7139117	im:7139117	Danio rerio	ENSDARG00000018611 (Ensembl)
HDRp1171	NP_997067	irx1a	iroquois homeobox protein 1, a	Danio rerio	ENSDARG00000009510 (Ensembl)
HDRp1094	NP_957351	irx2a	iroquois homeobox protein 2, a	Danio rerio	ENSDARG00000001785 (Ensembl)
HDRp1122	NP_998265	irx3b	iroquois homeobox protein 3b	Danio rerio	ENSDARG00000031138 (Ensembl)
HDRp1224	NP_001018329	irx4b	iroquois homeobox protein 4b	Danio rerio	ENSDARG00000036051 (Ensembl)
HDRp1178	NP_001038692	irx5a	iroquois homeobox protein 5	Danio rerio	ENSDARG00000034043 (Ensembl)
HDRp1132	XP_691361	irx6a	iroquois homeobox protein 6a	Danio rerio	ENSDARG00000034420 (Ensembl)
HDRp1092	NP_571956	irx7	iroquois homeobox protein 7	Danio rerio	ENSDARG00000002601 (Ensembl)
HDRp1107	NP_571037	isl1	islet1	Danio rerio	P53405 (UniProt)
HDRp1186	NP_571045	isl2a	islet2a	Danio rerio	P53406 (UniProt)
HDRp1189	NP_705957	lass2	LAG1 homolog, ceramide synthase 2 (S. cerevisiae)	Danio rerio	ENSDARG00000013704 (Ensembl)
HDRp1124	NP_955922	lass5	LAG1 homolog, ceramide synthase 5 (S. cerevisiae)	Danio rerio	ENSDARG00000002365 (Ensembl)
HDRp1128	NP_001007135	lbx1	ladybird homeobox homolog 1 (Drosophila)	Danio rerio	ENSDARG00000025131 (Ensembl)
HDRp1201	NP_571291	lhx1a	LIM homeobox 1a	Danio rerio	Q90476 (UniProt)
HDRp1191	NP_571282	lhx1b	LIM homeobox 1b	Danio rerio	ENSDARG00000007944 (Ensembl)
HDRp1126	NP_001035099	lhx2	LIM homeobox 2	Danio rerio	ENSDARG00000031222 (Ensembl)
HDRp1174	NP_571283	lhx3	LIM homeobox 3	Danio rerio	Q90421 (UniProt)
HDRp1214	NP_571293	lhx5	LIM homeobox 5	Danio rerio	P52889 (UniProt)
HDRp1143	NP_001004015	lhx6	LIM homeobox 6	Danio rerio	ENSDARG00000006896 (Ensembl)
HDRp1176	NP_001003980	lhx8	LIM homeobox 8	Danio rerio	ENSDARG00000002330 (Ensembl)
HDRp1103	NP_001020339	lmx1b.2	LIM homeobox transcription factor 1, beta 2	Danio rerio	ENSDARG00000019306 (Ensembl)
HDRp1165	NP_571968	meis1	myeloid ecotropic viral integration 1	Danio rerio	ENSDARG00000012078 (Ensembl)
HDRp1205	NP_571972	meis4.1a	myeloid ecotropic viral integration site 4.1a	Danio rerio	ENSDARG00000002937 (Ensembl)
HDRp1111	NP_001092203	mkxa	mohawk homeobox a	Danio rerio	ENSDARG00000006087 (Ensembl)
HDRp1226	NP_001025440	msxa	muscle segment homeobox A	Danio rerio	Q03357 (UniProt)
HDRp1157	NP_571335	msxb	muscle segment homeobox B	Danio rerio	Q03356 (UniProt)
HDRp1204	NP_571347	msxc	muscle segment homeobox C	Danio rerio	Q01703 (UniProt)
HDRp1154	NP_571351	msxd	muscle segment homeobox D	Danio rerio	Q01704 (UniProt)
HDRp1179	NP_571348	msxe	muscle segment homeobox E	Danio rerio	ENSDARG00000007641 (Ensembl)
HDRp1231	NP_571635	mxtx1	mix-type homeobox gene 1	Danio rerio	ENSDARG00000069382 (Ensembl)
HDRp1182	NP_001073284	mxtx2	mix-type homeobox gene 2	Danio rerio	ENSDARG00000015906 (Ensembl)
HDRp1097	NP_997995	nkx1.2la	NK1 transcription factor related 2-like,a	Danio rerio	ENSDARG00000006350 (Ensembl)
HDRp1117	NP_998713	nkx1.2lb	NK1 transcription factor related 2-like,b	Danio rerio	ENSDARG00000012697 (Ensembl)
HDRp1183	NP_571664	nkx2.1a	NK2 homeobox 1a	Danio rerio	ENSDARG00000010461 (Ensembl)
HDRp1104	NP_571851	nkx2.1b	NK2 homeobox 1b	Danio rerio	ENSDARG00000019835 (Ensembl)
HDRp1210	NP_571498	nkx2.3	NK2 transcription factor related 3	Danio rerio	ENSDARG00000039095 (Ensembl)
HDRp1208	NP_571496	nkx2.5	NK2 transcription factor related 5	Danio rerio	ENSDARG00000018004 (Ensembl)
HDRp1100	NP_571494	nkx2.7	NK2 transcription factor related 7	Danio rerio	ENSDARG00000021232 (Ensembl)
HDRp1151	NP_001002475	nkx6.1	NK6 transcription factor related, locus 1 (Drosophila)	Danio rerio	ENSDARG00000022569 (Ensembl)
HDRp1112	NP_956867	onecut1	one cut domain, family member 1	Danio rerio	ENSDARG00000007982 (Ensembl)
HDRp1085	NP_001122175	otpa	orthopedia homolog a	Danio rerio	ENSDARG00000014201 (Ensembl)
HDRp1175	NP_571290	otx1l	orthodenticle homolog 1 like	Danio rerio	Q90267 (UniProt)
HDRp1089	NP_571326	otx2	orthodenticle homolog 2	Danio rerio	Q91981 (UniProt)
HDRp1110	NP_571352	pax3	paired box gene 3	Danio rerio	ENSDARG00000010192 (Ensembl)
HDRp545	NP_571379	pax6a	paired box gene 6a	Danio rerio	P26630 (UniProt)
HDRp1243	NP_571716	pax6b	paired box gene 6b	Danio rerio	ENSDARG00000045936 (Ensembl)
HDRp1152	NP_571399	pax7	paired box gene 7	Danio rerio	ENSDARG00000005173 (Ensembl)
HDRp1138	NP_571689	pbx1a	pre-B-cell leukemia transcription factor 1a	Danio rerio	ENSDARG00000008145 (Ensembl)
HDRp1120	NP_571687	pbx2	pre-B-cell leukemia transcription factor 2	Danio rerio	ENSDARG00000019717 (Ensembl)
HDRp1106	NP_001091713	pbx3b	pre-B-cell leukemia transcription factor 3b	Danio rerio	ENSDARG00000013615 (Ensembl)
HDRp1166	NP_571518	pdx1	pancreatic and duodenal homeobox 1	Danio rerio	ENSDARG00000002779 (Ensembl)
HDRp1156	NP_996953	phox2a	paired-like homeobox 2a	Danio rerio	ENSDARG00000007406 (Ensembl)
HDRp1146	NP_571966	pknox1.1	pbx/knotted 1 homeobox 1.1	Danio rerio	ENSDARG00000018765 (Ensembl)
HDRp1131	NP_001082798	pou2f1b	POU class 2 homeobox 1b	Danio rerio	ENSDARG00000007996 (Ensembl)
HDRp1196	NP_571235	pou47	POU domain gene 47	Danio rerio	P79746 (UniProt)
HDRp1134	NP_958442	pou4f1	POU domain, class 4, transcription factor 1	Danio rerio	ENSDARG00000005559 (Ensembl)
HDRp1148	NP_571353	pou4f3	POU domain, class 4, transcription factor 3	Danio rerio	ENSDARG00000006206 (Ensembl)
HDRp1195	NP_571236	pou50	POU domain gene 50	Danio rerio	Q90482 (UniProt)
HDRp1237	NP_571480	prox1	prospero-related homeobox gene 1	Danio rerio	ENSDARG00000055158 (Ensembl)
HDRp1136	NP_999899	prrx1	paired related homeobox 1	Danio rerio	ENSDARG00000033971 (Ensembl)
HDRp1184	NP_957490	shox2	short stature homeobox 2	Danio rerio	ENSDARG00000008869 (Ensembl)
HDRp1187	NP_001020703	si:ch211-103o12.1	si:ch211-103o12.1	Danio rerio	ENSDARG00000018321 (Ensembl)
HDRp1161	NP_001020669	si:ch211-260g14.3	si:ch211-260g14.3	Danio rerio	ENSDARG00000020354 (Ensembl)
HDRp1142	XP_685125	si:dkey-3j24.1	si:dkey-3j24.1	Danio rerio	ENSDARG00000019658 (Ensembl)
HDRp1160	NP_996978	six1	sine oculis homeobox homolog 1 (Drosophila)	Danio rerio	ENSDARG00000026473 (Ensembl)
HDRp1130	NP_571792	six4.1	sine oculis homeobox homolog 4.1	Danio rerio	ENSDARG00000031983 (Ensembl)
HDRp1105	NP_571793	six4.2	sine oculis homeobox homolog 4.2	Danio rerio	ENSDARG00000004695 (Ensembl)
HDRp1221	CAP09417	six4.3	sine oculis homeobox homolog 4.3	Danio rerio	ENSDARG00000068111 (Ensembl)
HDRp1109	NP_739571	tlx1	T-cell leukemia, homeobox 1	Danio rerio	ENSDARG00000003965 (Ensembl)
HDRp1141	NP_705937	tlx3a	T-cell leukemia, homeobox 3a	Danio rerio	ENSDARG00000011273 (Ensembl)
HDRp1177	NP_919391	vax1	ventral anterior homeobox 1	Danio rerio	Q801E0 (UniProt)
HDRp1169	NP_571773	vox	ventral homeobox	Danio rerio	ENSDARG00000014277 (Ensembl)
HDRp1093	NP_571537	vsx2	visual system homeobox 2	Danio rerio	O42477 (UniProt)
HDRp1225	NP_919353	wu:fc23f06	wu:fc23f06	Danio rerio	ENSDARG00000022295 (Ensembl)
HDRp1145	XP_694587	wu:fk11d03	wu:fk11d03	Danio rerio	ENSDARG00000024598 (Ensembl)
HDRp1102	NP_001003563	zgc:101100	zgc:101100	Danio rerio	ENSDARG00000021959 (Ensembl)
HDRp1137	NP_001018421	zgc:110344	zgc:110344	Danio rerio	ENSDARG00000031316 (Ensembl)
HDRp1240	NP_001013342	zgc:113257	zgc:113257	Danio rerio	ENSDARG00000069327 (Ensembl)
HDRp1203	NP_705940	zgc:136733	zgc:136733	Danio rerio	ENSDARG00000004191 (Ensembl)
HDRp1164	NP_001077322	zgc:158824	zgc:158824	Danio rerio	ENSDARG00000027695 (Ensembl)
HDRp1155	NP_001104636	zgc:171531	zgc:171531	Danio rerio	ENSDARG00000012693 (Ensembl)
HDRp1194	NP_957399	zgc:63871	zgc:63871	Danio rerio	ENSDARG00000025187 (Ensembl)
HDRp1099	NP_001002450	zgc:92343	mesenchyme homeobox 1	Danio rerio	ENSDARG00000007891 (Ensembl)
HDRp1193	NP_942108	zhx3	zinc fingers and homeoboxes 3	Danio rerio	ENSDARG00000019774 (Ensembl)
HDRp1848	XP_635379	LOC3386929		Dictyostelium discoideum AX4
HDRp1857	XP_636049	LOC3387664		Dictyostelium discoideum AX4
HDRp1858	XP_636458	LOC3388032		Dictyostelium discoideum AX4
HDRp1853	XP_637648	LOC3389159		Dictyostelium discoideum AX4
HDRp1855	XP_638704	LOC3390247		Dictyostelium discoideum AX4
HDRp1846	XP_641195	LOC3392317		Dictyostelium discoideum AX4
HDRp1851	XP_641755	LOC3392899		Dictyostelium discoideum AX4
HDRp1850	XP_642221	LOC3393303		Dictyostelium discoideum AX4
HDRp1856	XP_642594	LOC3393768		Dictyostelium discoideum AX4
HDRp1849	XP_644439	LOC3395719		Dictyostelium discoideum AX4
HDRp1859	XP_644811	LOC3395830		Dictyostelium discoideum AX4
HDRp1854	XP_644890	LOC3396166		Dictyostelium discoideum AX4
HDRp1847	XP_643746	hbx2		Dictyostelium discoideum AX4
HDRp1852	XP_635408	warA		Dictyostelium discoideum AX4
HDRp1762	NP_650577	Abd-B	Abdominal B	Drosophila melanogaster
HDRp427	NP_996172	Antp		Drosophila melanogaster	P02833 (UniProt)
HDRp1805	NP_728906	Awh	Arrowhead	Drosophila melanogaster
HDRp1788	NP_523387	B-H1	BarH1	Drosophila melanogaster
HDRp1814	NP_523386	B-H2	BarH2	Drosophila melanogaster
HDRp1794	NP_476873	C15	C15	Drosophila melanogaster
HDRp1838	NP_572815	CG11085	CG11085	Drosophila melanogaster
HDRp1800	NP_572500	CG11294	CG11294	Drosophila melanogaster
HDRp1815	NP_608502	CG11617	CG11617	Drosophila melanogaster
HDRp1844	NP_647677	CG12361	CG12361	Drosophila melanogaster
HDRp1774	NP_611491	CG13424	CG13424	Drosophila melanogaster
HDRp1785	NP_001015326	CG14578	CG14578	Drosophila melanogaster
HDRp1836	NP_650921	CG15696	CG15696	Drosophila melanogaster
HDRp1845	NP_650701	CG18599	CG18599	Drosophila melanogaster
HDRp1798	NP_729801	CG32105	CG32105	Drosophila melanogaster
HDRp1777	NP_608318	CG32532	CG32532	Drosophila melanogaster
HDRp1784	NP_001033832	CG33980	CG33980	Drosophila melanogaster
HDRp1835	NP_001034037	CG34031	CG34031	Drosophila melanogaster
HDRp1816	NP_001097075	CG34340		Drosophila melanogaster
HDRp1773	NP_001097140	CG34367		Drosophila melanogaster
HDRp1843	NP_572232	CG4136	CG4136	Drosophila melanogaster
HDRp1793	NP_648567	CG4328	CG4328	Drosophila melanogaster
HDRp1764	NP_650938	CG7056	CG7056	Drosophila melanogaster
HDRp1766	NP_611756	CG9876	CG9876	Drosophila melanogaster
HDRp441	NP_477201	Dfd		Drosophila melanogaster	P07548 (UniProt)
HDRp1842	NP_523857	Dll	Distal-less	Drosophila melanogaster
HDRp1822	NP_477324	Dr	Drop	Drosophila melanogaster
HDRp1772	NP_524825	E5	E5	Drosophila melanogaster
HDRp1827	NP_476949	Gsc	Goosecoid	Drosophila melanogaster
HDRp1821	NP_523488	H2.0	Homeodomain protein 2.0	Drosophila melanogaster
HDRp1828	NP_652614	HGTX	HGTX	Drosophila melanogaster
HDRp1771	NP_732244	Hmx		Drosophila melanogaster
HDRp1795	NP_652526	Lag1	Longevity assurance gene 1	Drosophila melanogaster
HDRp1806	NP_572505	Lim1		Drosophila melanogaster
HDRp1761	NP_476606	Lim3	Lim3	Drosophila melanogaster
HDRp1779	NP_731904	NK7.1	NK7.1	Drosophila melanogaster
HDRp1832	NP_523389	OdsH	Ods-site homeobox	Drosophila melanogaster
HDRp1776	NP_524695	Optix	Optix	Drosophila melanogaster
HDRp1841	NP_523834	PHDP	Putative homeodomain protein	Drosophila melanogaster
HDRp1780	NP_477330	Pph13	PvuII-PstI homology 13	Drosophila melanogaster
HDRp1790	NP_996314	Ptx1	Ptx1	Drosophila melanogaster
HDRp1825	NP_726006	Rx	Retinal Homeobox	Drosophila melanogaster
HDRp1813	NP_996165	Scr	Sex combs reduced	Drosophila melanogaster	P09077 (UniProt)
HDRp1781	NP_649256	Six4	Six4	Drosophila melanogaster
HDRp511	NP_996219	Ubx		Drosophila melanogaster	P83949 (UniProt)
HDRp1829	NP_732172	Ubx	Ultrabithorax	Drosophila melanogaster
HDRp1839	NP_732176	abd-A	abdominal A	Drosophila melanogaster
HDRp1765	NP_725182	achi	achintya	Drosophila melanogaster
HDRp1804	NP_001014744	acj6	abnormal chemosensory jump 6	Drosophila melanogaster
HDRp426	NP_722629	al		Drosophila melanogaster	Q06453 (UniProt)
HDRp1802	NP_724428	ap	apterous	Drosophila melanogaster
HDRp1807	NP_524045	ara	araucan	Drosophila melanogaster
HDRp436	NP_732637	bap		Drosophila melanogaster	P22809 (UniProt)
HDRp1370	NP_788587	bcd	bicoid	Drosophila melanogaster	P09081 (UniProt)
HDRp1770	NP_995728	bsh	brain-specific homeobox	Drosophila melanogaster
HDRp1760	NP_732768	btn	buttonless	Drosophila melanogaster
HDRp1840	NP_599128	cad	caudal	Drosophila melanogaster
HDRp1817	NP_524046	caup	caupolican	Drosophila melanogaster
HDRp1782	NP_524764	ct	cut	Drosophila melanogaster
HDRp1808	NP_477242	dve	defective proventriculus	Drosophila melanogaster
HDRp1824	NP_731868	ems	empty spiracles	Drosophila melanogaster
HDRp452	NP_725059	en		Drosophila melanogaster	P02836 (UniProt)
HDRp440	NP_523670	eve		Drosophila melanogaster	P06602 (UniProt)
HDRp434	NP_523360	exd		Drosophila melanogaster	P40427 (UniProt)
HDRp1819	NP_648164	exex	extra-extra	Drosophila melanogaster
HDRp491	NP_726607	ey		Drosophila melanogaster	O18381 (UniProt)
HDRp1803	NP_001014582	eyg	eyegone	Drosophila melanogaster
HDRp435	NP_477498	ftz		Drosophila melanogaster	P02835 (UniProt)
HDRp1769	NP_523863	gsb	gooseberry	Drosophila melanogaster
HDRp1796	NP_523862	gsb-n	gooseberry-neuro	Drosophila melanogaster
HDRp1791	NP_788420	hbn	homeobrain	Drosophila melanogaster
HDRp1775	NP_731486	hth	homothorax	Drosophila melanogaster	O46339 (UniProt)
HDRp1810	NP_996087	ind	intermediate neuroblasts defective	Drosophila melanogaster
HDRp1811	NP_725055	inv	invected	Drosophila melanogaster
HDRp481	NP_476613	lab		Drosophila melanogaster	P10105 (UniProt)
HDRp1833	NP_524435	lbe	ladybird early	Drosophila melanogaster
HDRp1823	NP_524434	lbl	ladybird late	Drosophila melanogaster
HDRp528	NP_524047	mirr		Drosophila melanogaster	O01667 (UniProt)
HDRp1792	NP_476659	nub		Drosophila melanogaster
HDRp1837	NP_511091	oc	ocelliless	Drosophila melanogaster
HDRp1789	NP_524842	onecut	onecut	Drosophila melanogaster
HDRp1820	NP_523799	otp	orthopedia	Drosophila melanogaster
HDRp1812	NP_996163	pb	proboscipedia	Drosophila melanogaster
HDRp1826	NP_523558	pdm2	POU domain protein 2	Drosophila melanogaster
HDRp1799	NP_610377	pdm3	pou domain motif 3	Drosophila melanogaster
HDRp500	NP_723721	prd		Drosophila melanogaster	P06601 (UniProt)
HDRp501	NP_731565	pros		Drosophila melanogaster	P29617 (UniProt)
HDRp1830	NP_477026	repo	reversed polarity	Drosophila melanogaster
HDRp1767	NP_524521	ro	rough	Drosophila melanogaster
HDRp1834	NP_001015473	scro	scarecrow	Drosophila melanogaster
HDRp1786	NP_476657	slou	slouch	Drosophila melanogaster
HDRp503	NP_476733	so		Drosophila melanogaster	Q27350 (UniProt)
HDRp513	NP_524433	tin		Drosophila melanogaster	P22711 (UniProt)
HDRp1818	NP_524041	toe	twin of eyg	Drosophila melanogaster
HDRp1778	NP_524638	toy	twin of eyeless	Drosophila melanogaster
HDRp1768	NP_476775	tup	tailup	Drosophila melanogaster
HDRp1831	NP_573242	unc-4	unc-4	Drosophila melanogaster
HDRp1763	NP_477146	unpg	unplugged	Drosophila melanogaster
HDRp1797	NP_523714	vis	vismay	Drosophila melanogaster
HDRp512	NP_476786	vnd		Drosophila melanogaster	P22808 (UniProt)
HDRp1809	NP_523948	vvl		Drosophila melanogaster
HDRp510	NP_476793	zen		Drosophila melanogaster	P09089 (UniProt)
HDRp1801	NP_476794	zen2	zerknullt-related	Drosophila melanogaster
HDRp1787	NP_733402	zfh1	Zn finger homeodomain 1	Drosophila melanogaster
HDRp1783	NP_524623	zfh2	Zn finger homeodomain 2	Drosophila melanogaster
HDRp525	NP_990130			Gallus gallus	Q9PVN2 (UniProt)
HDRp537	NP_990399		gastrulation brain homeobox 2	Gallus gallus	O42230 (UniProt)
HDRp1518	XP_001874000	LOC6069195		Laccaria bicolor
HDRp1521	XP_001874062	LOC6069298		Laccaria bicolor
HDRp1516	XP_001874179	LOC6069704		Laccaria bicolor
HDRp1524	XP_001875812	LOC6071159		Laccaria bicolor
HDRp1520	XP_001877427	LOC6073140		Laccaria bicolor
HDRp1517	XP_001880358	LOC6076128		Laccaria bicolor
HDRp1523	XP_001880981	LOC6076270		Laccaria bicolor
HDRp1519	XP_001881281	LOC6077004		Laccaria bicolor
HDRp1522	XP_001886898	LOC6082556		Laccaria bicolor
HDRp1560	XP_369060	LOC2674603		Magnaporthe grisea
HDRp1558	XP_359924	LOC2675295		Magnaporthe grisea
HDRp1559	XP_363804	LOC2679750		Magnaporthe grisea
HDRp1555	XP_367526	LOC2683357		Magnaporthe grisea
HDRp1557	XP_369770	LOC2684440		Magnaporthe grisea
HDRp1556	XP_001406021	LOC5049506		Magnaporthe grisea
HDRp1561	XP_001409049	LOC5050231		Magnaporthe grisea
HDRp530				Mesocricetus auratus	Q04649 (UniProt)
HDRp531				Mesocricetus auratus	P70118 (UniProt)
HDRp534				Mesocricetus auratus	Q60554 (UniProt)
HDRp1357	XP_001472578	100039213	predicted gene, 100039213	Mus musculus
HDRp1281	XP_001478355	100042273	predicted gene, 100042273	Mus musculus
HDRp1262	XP_001478699	100042702	predicted gene, 100042702	Mus musculus
HDRp1275	XP_001478703	100042707	predicted gene, 100042707	Mus musculus
HDRp1265	XP_001478709	100042711	predicted gene, 100042711	Mus musculus
HDRp1289	XP_001478715	100042714	predicted gene, 100042714	Mus musculus
HDRp1288	XP_001478723	100042717	predicted gene, 100042717	Mus musculus
HDRp1367	XP_001478738	100042721	predicted gene, 100042721	Mus musculus
HDRp1253	XP_001478746	100042728	predicted gene, 100042728	Mus musculus
HDRp1252	XP_001478757	100042731	predicted gene, 100042731	Mus musculus
HDRp1332	XP_001478764	100042735	predicted gene, 100042735	Mus musculus
HDRp1298	XP_001478772	100042739	predicted gene, 100042739	Mus musculus
HDRp1284	XP_001478781	100042742	predicted gene, 100042742	Mus musculus
HDRp1343	XP_001478762	100043090	predicted gene, 100043090	Mus musculus
HDRp1287	XP_001479156	100043090	predicted gene, 100043090	Mus musculus
HDRp744	XP_981115	1700123J19Rik	Reproductive homeobox 13	Mus musculus	ENSMUSG00000050197 (Ensembl)
HDRp1341	XP_001477480	235841	predicted gene, 235841	Mus musculus
HDRp1356	XP_001478789	235841	predicted gene, 235841	Mus musculus
HDRp1366	XP_001481314	4933403O03Rik	RIKEN cDNA 4933403O03 gene	Mus musculus
HDRp1266	XP_618764	4933403O03Rik	RIKEN cDNA 4933403O03 gene	Mus musculus
HDRp1267	XP_618764	4933403O03Rik	RIKEN cDNA 4933403O03 gene	Mus musculus
HDRp1329	XP_991265	666337	predicted gene, 666337	Mus musculus
HDRp1365	XP_991231	666337	predicted gene, 666337	Mus musculus
HDRp892	NP_001028626	AI427809	expressed sequence AI427809	Mus musculus	ENSMUSG00000073854 (Ensembl)
HDRp827	NP_033758	Adnp	activity-dependent neuroprotective protein	Mus musculus	Q9Z103 (UniProt)
HDRp792	NP_778193	Adnp2	ADNP homeobox 2	Mus musculus	Q8CHC8 (UniProt)
HDRp840	NP_766141	Alx1	ALX homeobox 1	Mus musculus	Q8C8B0 (UniProt)
HDRp824	NP_031467	Alx3	aristaless 3	Mus musculus	O70137 (UniProt)
HDRp425	NP_031468	Alx4	aristaless 4	Mus musculus	O35137 (UniProt)
HDRp884	NP_031518	Arx	aristaless related homeobox gene (Drosophila)	Mus musculus	O35085 (UniProt)
HDRp788	NP_062319	Barhl1	BarH-like 1 (Drosophila)	Mus musculus	P63157 (UniProt)
HDRp758	NP_001005477	Barhl2	BarH-like 2 (Drosophila)	Mus musculus	Q8VIB5 (UniProt)
HDRp859	NP_031552	Barx1	BarH-like homeobox 1	Mus musculus	Q9ER42 (UniProt)
HDRp785	NP_038828	Barx2	BarH-like homeobox 2	Mus musculus	O08686 (UniProt)
HDRp740	NP_839976	Bsx	brain specific homeobox	Mus musculus	Q810B3 (UniProt)
HDRp429	NP_034010	Cdx1	caudal type homeo box 1	Mus musculus	P18111 (UniProt)
HDRp430	NP_031699	Cdx2	caudal type homeo box 2	Mus musculus	P43241 (UniProt)
HDRp433	NP_031700	Cdx4	caudal type homeo box 4	Mus musculus	Q07424 (UniProt)
HDRp1362	NP_780551	Cphx	cytoplasmic polyadenylated homeobox	Mus musculus
HDRp432	NP_031796	Crx	cone-rod homeobox containing gene	Mus musculus	O54751 (UniProt)
HDRp1321	NP_001028810	Crxos1	Crx opposite strand transcript 1	Mus musculus
HDRp1322	NP_001028810	Crxos1	Crx opposite strand transcript 1	Mus musculus
HDRp856	NP_034116	Cux1	cut-like homeobox 1	Mus musculus	P53564 (UniProt)
HDRp752	NP_031830	Cux2	cut-like homeobox 2	Mus musculus	P70298 (UniProt)
HDRp755	NP_001005232	Dbx1	developing brain homeobox 1	Mus musculus	P52950 (UniProt)
HDRp822	NP_997416	Dbx2	developing brain homeobox 2	Mus musculus	ENSMUSG00000045608 (Ensembl)
HDRp749	NP_034183	Dlx1	distal-less homeobox 1	Mus musculus	Q64317 (UniProt)
HDRp442	NP_034184	Dlx2	distal-less homeobox 2	Mus musculus	P40764 (UniProt)
HDRp443	NP_034185	Dlx3	distal-less homeobox 3	Mus musculus	Q64205 (UniProt)
HDRp834	NP_031893	Dlx4	distal-less homeobox 4	Mus musculus	P70436 (UniProt)
HDRp437	NP_034186	Dlx5	distal-less homeobox 5	Mus musculus	P70396 (UniProt)
HDRp536	NP_034187	Dlx6	distal-less homeobox 6	Mus musculus	P70397 (UniProt)
HDRp803	NP_001020738	Dmbx1	diencephalon/mesencephalon homeobox 1	Mus musculus	Q91ZK4 (UniProt)
HDRp1339	NP_001075423	Dux	double homeobox	Mus musculus
HDRp1340	NP_001075423	Dux	double homeobox	Mus musculus
HDRp789	NP_899245	Duxbl	double homeobox B-like	Mus musculus	ENSMUSG00000048502 (Ensembl)
HDRp802	NP_001033765	EG194588	predicted gene, EG194588	Mus musculus	ENSMUSG00000055942 (Ensembl)
HDRp1257	NP_001030041	EG245263	predicted gene, EG245263	Mus musculus
HDRp1345	XP_485865	EG434123	predicted gene, EG434123	Mus musculus
HDRp1354	XP_001477367	EG434123	predicted gene, EG434123	Mus musculus
HDRp1358	XP_905195	EG545921	predicted gene, EG545921	Mus musculus
HDRp1255	XP_620426	EG545921	predicted gene, EG545921	Mus musculus
HDRp1352	XP_891832	EG622311	predicted gene, EG622311	Mus musculus
HDRp1337	XP_989323	EG638338	predicted gene, EG638338	Mus musculus
HDRp1290	XP_919432	EG638338	predicted gene, EG638338	Mus musculus
HDRp1313	XP_977718	EG664783	predicted gene, EG664783	Mus musculus
HDRp1314	XP_977718	EG664783	predicted gene, EG664783	Mus musculus
HDRp1315	NP_001095927	EG665203	predicted gene, EG665203	Mus musculus
HDRp1292	XP_991194	EG666312	predicted gene, EG666312	Mus musculus
HDRp1318	XP_991162	EG666312	predicted gene, EG666312	Mus musculus
HDRp1346	XP_988588	EG666381	predicted gene, EG666381	Mus musculus
HDRp1368	XP_990291	EG666649	predicted gene, EG666649	Mus musculus
HDRp1306	XP_983125	EG666649	predicted gene, EG666649	Mus musculus
HDRp1278	XP_996775	EG667649	predicted gene, EG667649	Mus musculus
HDRp1261	XP_989753	EG667649	predicted gene, EG667649	Mus musculus
HDRp1351	XP_001003762	EG668814	predicted gene, EG668814	Mus musculus
HDRp1324	XP_984608	EG668814	predicted gene, EG668814	Mus musculus
HDRp1325	XP_001472744	ENSMUSG00000049982	predicted gene, ENSMUSG00000049982	Mus musculus
HDRp1276	XP_001472770	ENSMUSG00000072672	predicted gene, ENSMUSG00000072672	Mus musculus
HDRp1277	XP_001472770	ENSMUSG00000072672	predicted gene, ENSMUSG00000072672	Mus musculus
HDRp1319	XP_001472604	ENSMUSG00000072675	predicted gene, ENSMUSG00000072675	Mus musculus
HDRp1320	XP_001472604	ENSMUSG00000072675	predicted gene, ENSMUSG00000072675	Mus musculus
HDRp891		ENSMUSG00000073850	predicted gene, ENSMUSG00000073850	Mus musculus	ENSMUSG00000073850 (Ensembl)
HDRp1296	XP_001478806	ENSMUSG00000074370	predicted gene, ENSMUSG00000074370	Mus musculus
HDRp1359	XP_001478796	ENSMUSG00000074371	predicted gene, ENSMUSG00000074371	Mus musculus
HDRp793	NP_034261	Emx1	empty spiracles homolog 1 (Drosophila)	Mus musculus	Q04742 (UniProt)
HDRp439	NP_034262	Emx2	empty spiracles homolog 2 (Drosophila)	Mus musculus	Q04744 (UniProt)
HDRp446	NP_034263	En1	engrailed 1	Mus musculus	P09065 (UniProt)
HDRp447	NP_034264	En2	engrailed 2	Mus musculus	P09066 (UniProt)
HDRp764	NP_031983	Esx1	extraembryonic, spermatogenesis, homeobox 1	Mus musculus	ENSMUSG00000023443 (Ensembl)
HDRp794	NP_031992	Evx1	even skipped homeotic gene 1 homolog	Mus musculus	P23683 (UniProt)
HDRp808	NP_031993	Evx2	even skipped homeotic gene 2 homolog	Mus musculus	P49749 (UniProt)
HDRp720	NP_056554	Gbx1	gastrulation brain homeobox 1	Mus musculus
HDRp795	NP_034392	Gbx2	gastrulation brain homeobox 2	Mus musculus	P48031 (UniProt)
HDRp843	NP_034481	Gsc	goosecoid homeobox	Mus musculus	Q02591 (UniProt)
HDRp833	XP_001480663	Gsc2	goosecoid homebox 2	Mus musculus	P56916 (UniProt)
HDRp888	NP_032204	Gsx1	GS homeobox 1	Mus musculus	P31315 (UniProt)
HDRp878	NP_573555	Gsx2	GS homeobox 2	Mus musculus	P31316 (UniProt)
HDRp807	NP_001074018	Hdx	highly divergent homeobox	Mus musculus	Q14B70 (UniProt)
HDRp448	NP_034550	Hesx1	homeo box gene expressed in ES cells	Mus musculus	Q61658 (UniProt)
HDRp762	NP_032271	Hhex	hematopoietically expressed homeobox	Mus musculus	P43120 (UniProt)
HDRp747	NP_032276	Hlx	H2.0-like homeobox	Mus musculus	Q61670 (UniProt)
HDRp775	NP_796312	Hmbox1	homeobox containing 1	Mus musculus	Q8BJA3 (UniProt)
HDRp1302	NP_034575	Hmx1	H6 homeo box 1	Mus musculus
HDRp877	NP_666110	Hmx2	H6 homeo box 2	Mus musculus	P43687 (UniProt)
HDRp820	NP_032283	Hmx3	H6 homeo box 3	Mus musculus	P42581 (UniProt)
HDRp449	NP_033353	Hnf1a	HNF1 homeobox A	Mus musculus	P22361 (UniProt)
HDRp774	NP_033356	Hnf1b	HNF1 homeobox B	Mus musculus	P27889 (UniProt)
HDRp777	NP_898997	Homez	homeodomain leucine zipper-encoding gene	Mus musculus	Q80W88 (UniProt)
HDRp455	NP_783199	Hopx	HOP homeobox	Mus musculus	Q8R1H0 (UniProt)
HDRp459	NP_034579	Hoxa1	homeo box A1	Mus musculus	P09022 (UniProt)
HDRp456	NP_032289	Hoxa10	homeo box A10	Mus musculus	P31310 (UniProt)
HDRp457	NP_034580	Hoxa11	homeo box A11	Mus musculus	P31311 (UniProt)
HDRp458	NP_032290	Hoxa13	homeo box A13	Mus musculus	Q62424 (UniProt)
HDRp460	NP_034581	Hoxa2	homeo box A2	Mus musculus	P31245 (UniProt)
HDRp890	NP_034582	Hoxa3	Hoxa3 homeo box A3	Mus musculus	ENSMUSG00000059723 (Ensembl)
HDRp854	NP_032291	Hoxa4	homeo box A4	Mus musculus	P06798 (UniProt)
HDRp451	NP_034583	Hoxa5	homeo box A5	Mus musculus	P09021 (UniProt)
HDRp868	NP_034584	Hoxa6	homeo box A6	Mus musculus	P09092 (UniProt)
HDRp782	NP_034585	Hoxa7	homeo box A7	Mus musculus	P02830 (UniProt)
HDRp465	NP_034586	Hoxa9	homeo box A9	Mus musculus	P09631 (UniProt)
HDRp454	NP_032292	Hoxb1	homeo box B1	Mus musculus	P17919 (UniProt)
HDRp453	NP_032293	Hoxb13	homeo box B13	Mus musculus	P70321 (UniProt)
HDRp1260	NP_598793	Hoxb2	homeo box B2	Mus musculus
HDRp756	NP_001073338	Hoxb3	homeo box B3	Mus musculus	P09026 (UniProt)
HDRp467	NP_034589	Hoxb4	homeo box B4	Mus musculus	P10284 (UniProt)
HDRp867	NP_032294	Hoxb5	homeo box B5	Mus musculus	P09079 (UniProt)
HDRp461	NP_032295	Hoxb6	homeo box B6	Mus musculus	P09023 (UniProt)
HDRp462	NP_034590	Hoxb7	homeo box B7	Mus musculus	P09024 (UniProt)
HDRp463	NP_034591	Hoxb8	homeo box B8	Mus musculus	P09632 (UniProt)
HDRp780	NP_032296	Hoxb9	homeo box B9	Mus musculus	P20615 (UniProt)
HDRp766	NP_034592	Hoxc10	homeo box C10	Mus musculus	P31257 (UniProt)
HDRp753	NP_001020013	Hoxc11	homeo box C11	Mus musculus	P31313 (UniProt)
HDRp796	NP_034593	Hoxc12	homeo box C12	Mus musculus	Q8K5B8 (UniProt)
HDRp464	NP_034594	Hoxc13	homeo box C13	Mus musculus	P50207 (UniProt)
HDRp721	NP_038581	Hoxc4	homeo box C4	Mus musculus
HDRp787	NP_783857	Hoxc5	homeo box C5	Mus musculus	P32043 (UniProt)
HDRp828	NP_034595	Hoxc6	homeo box C6	Mus musculus	P10629 (UniProt)
HDRp839	NP_034596	Hoxc8	homeo box C8	Mus musculus	P09025 (UniProt)
HDRp745	NP_032298	Hoxc9	homeo box C9	Mus musculus	P09633 (UniProt)
HDRp784	NP_034597	Hoxd1	homeo box D1	Mus musculus	Q01822 (UniProt)
HDRp466	NP_038582	Hoxd10	homeo box D10	Mus musculus	P28359 (UniProt)
HDRp798	NP_032299	Hoxd11	homeo box D11	Mus musculus	P23813 (UniProt)
HDRp473	NP_032300	Hoxd12	homeo box D12	Mus musculus	P23812 (UniProt)
HDRp474	NP_032301	Hoxd13	homeo box D13	Mus musculus	P70217 (UniProt)
HDRp736	NP_034598	Hoxd3	homeo box D3	Mus musculus
HDRp475	NP_034599	Hoxd4	homeo box D4	Mus musculus	P10628 (UniProt)
HDRp797	NP_032302	Hoxd8	homeo box D8	Mus musculus	P23463 (UniProt)
HDRp476	NP_038583	Hoxd9	homeo box D9	Mus musculus	P28357 (UniProt)
HDRp772	NP_034703	Irx1	Iroquois related homeobox 1 (Drosophila)	Mus musculus	P81068 (UniProt)
HDRp821	NP_034704	Irx2	Iroquois related homeobox 2 (Drosophila)	Mus musculus	P81066 (UniProt)
HDRp825	NP_032419	Irx3	Iroquois related homeobox 3 (Drosophila)	Mus musculus	P81067 (UniProt)
HDRp851	NP_061373	Irx4	Iroquois related homeobox 4 (Drosophila)	Mus musculus	Q9QY61 (UniProt)
HDRp847	NP_061296	Irx5	Iroquois related homeobox 5 (Drosophila)	Mus musculus	Q9JKQ4 (UniProt)
HDRp767	NP_071873	Irx6	Iroquois related homeobox 6 (Drosophila)	Mus musculus	Q9ER75 (UniProt)
HDRp850	NP_067434	Isl1	ISL1 transcription factor, LIM/homeodomain	Mus musculus	P61372 (UniProt)
HDRp471	NP_081673	Isl2	insulin related protein 2 (islet 2)	Mus musculus	Q9CXV0 (UniProt)
HDRp882	NP_082113	Isx	intestine specific homeobox	Mus musculus	A1A546 (UniProt)
HDRp1344	XP_001472823	LOC100039371	similar to OBOX4	Mus musculus
HDRp1250	XP_001472840	LOC100039380	similar to OBOX4	Mus musculus
HDRp1251	XP_001472877	LOC100039399	similar to OBOX4	Mus musculus
HDRp791	XP_001472945	LOC100039551	similar to testis-expressed homeobox protein Tex1	Mus musculus	ENSMUSG00000063242 (Ensembl)
HDRp1280	XP_001471948	LOC100044312	hypothetical protein LOC100044312	Mus musculus
HDRp1317	XP_001471625	LOC100044313	hypothetical protein LOC100044313	Mus musculus
HDRp1283	XP_001472305	LOC100044440	similar to Arx homeoprotein	Mus musculus
HDRp1268	XP_001473475	LOC100044971	similar to POU domain, class 4, transcription factor 1 (Brain-specific homeobox/POU domain protein 3A) (Brn-3A) (Brn-3.0)	Mus musculus
HDRp1363	XP_001473555	LOC100045013	similar to ventral anterior homeobox-containing protein 1	Mus musculus
HDRp1301	XP_001474433	LOC100045487	similar to homeodomain transcription factor	Mus musculus
HDRp1348	XP_001474122	LOC100045612	similar to iroquois-class homeobox protein IRX2	Mus musculus
HDRp1293	XP_001475365	LOC100045995	similar to oocyte specific homeobox 3	Mus musculus
HDRp1299	XP_001475480	LOC100046032	similar to brain-2 class III POU-domain protein	Mus musculus
HDRp1355	XP_001476547	LOC100046606	similar to reproductive homeobox on X chromosome 2	Mus musculus
HDRp1360	XP_001476747	LOC100046720	similar to Reproductive homeobox 11	Mus musculus
HDRp1369	XP_001476805	LOC100046899	similar to Myeloid ecotropic viral integration site-related gene 2	Mus musculus
HDRp1291	XP_001477479	LOC100047119	similar to gastrulation brain homeobox 1	Mus musculus
HDRp1328	XP_001477507	LOC100047130	similar to Crx opposite strand transcript 1	Mus musculus
HDRp1294	XP_001478349	LOC100047506	similar to PBX3a	Mus musculus
HDRp1271	XP_001479216	LOC100047930	similar to NK2 transcription factor related, locus 9	Mus musculus
HDRp1258	XP_001480375	LOC100048479	similar to hepatocyte nuclear factor 6 beta	Mus musculus
HDRp1353	XP_895249	LOC625574	similar to TGFB-induced factor 2	Mus musculus
HDRp1259	NP_001074414	LOC634428	similar to Nanog homeobox	Mus musculus
HDRp1304	XP_916663	LOC636245	similar to CG32532-PA	Mus musculus
HDRp1308	XP_001473685	LOC672284	similar to homeodomain protein Sax2	Mus musculus
HDRp1333	XP_982057	LOC674773	similar to Zinc finger protein 409	Mus musculus
HDRp1334	XP_982057	LOC674773	similar to Zinc finger protein 409	Mus musculus
HDRp1335	XP_982057	LOC674773	similar to Zinc finger protein 409	Mus musculus
HDRp735	XP_990400	LOC675809	similar to Homeobox protein SIX2 (Sine oculis homeobox homolog 2)	Mus musculus
HDRp1361	XP_001003209	LOC676870	region containing RIKEN cDNA 2310056B04 gene; pre B-cell leukemia transcription factor 1	Mus musculus
HDRp754	NP_084065	Lass2	LAG1 homolog, ceramide synthase 2	Mus musculus	Q924Z4 (UniProt)
HDRp757	XP_620510	Lass3	LAG1 homolog, ceramide synthase 3	Mus musculus	ENSMUSG00000030510 (Ensembl)
HDRp761	NP_080334	Lass4	LAG1 homolog, ceramide synthase 4	Mus musculus	Q9D6J1 (UniProt)
HDRp855	NP_082291	Lass5	LAG1 homolog, ceramide synthase 5	Mus musculus	Q9D6K9 (UniProt)
HDRp830	NP_766444	Lass6	LAG1 homolog, ceramide synthase 6	Mus musculus	Q8C172 (UniProt)
HDRp886	NP_034821	Lbx1	ladybird homeobox homolog 1 (Drosophila)	Mus musculus	P52955 (UniProt)
HDRp814	NP_034822	Lbx2	ladybird homeobox homolog 2 (Drosophila)	Mus musculus	Q9WUN8 (UniProt)
HDRp478	NP_032524	Lhx1	LIM homeobox protein 1	Mus musculus	P63006 (UniProt)
HDRp468	NP_034840	Lhx2	LIM homeobox protein 2	Mus musculus	Q9Z0S2 (UniProt)
HDRp469	NP_001034742	Lhx3	LIM homeobox protein 3	Mus musculus	P50481 (UniProt)
HDRp771	NP_034842	Lhx4	LIM homeobox protein 4	Mus musculus	P53776 (UniProt)
HDRp861	NP_032525	Lhx5	LIM homeobox protein 5	Mus musculus	P61375 (UniProt)
HDRp875	NP_001076594	Lhx6	LIM homeobox protein 6	Mus musculus	O88706 (UniProt)
HDRp800	NP_034843	Lhx8	LIM homeobox protein 8	Mus musculus	O35652 (UniProt)
HDRp844	NP_001036042	Lhx9	LIM homeobox protein 9	Mus musculus	Q9WUH2 (UniProt)
HDRp741	NP_387501	Lmx1a	LIM homeobox transcription factor 1 alpha	Mus musculus	Q9JKU8 (UniProt)
HDRp885	NP_034855	Lmx1b	LIM homeobox transcription factor 1 beta	Mus musculus	O88609 (UniProt)
HDRp483	NP_034919	Meis1	Meis homeobox 1	Mus musculus	Q60954 (UniProt)
HDRp484	NP_034955	Meis2	Meis homeobox 2	Mus musculus	P97367 (UniProt)
HDRp550	NP_032653	Meis3	Meis homeobox 3	Mus musculus	P97368 (UniProt)
HDRp485	NP_034921	Meox1	mesenchyme homeobox 1	Mus musculus	P32442 (UniProt)
HDRp486	NP_032610	Meox2	mesenchyme homeobox 2	Mus musculus	P32443 (UniProt)
HDRp818	NP_038757	Mixl1	Mix1 homeobox-like 1 (Xenopus laevis)	Mus musculus	Q9WUI0 (UniProt)
HDRp874	NP_808263	Mkx	mohawk	Mus musculus	Q8BIA3 (UniProt)
HDRp760	NP_064328	Mnx1	motor neuron and pancreas homeobox 1	Mus musculus	Q9QZW9 (UniProt)
HDRp487	NP_034965	Msx1	homeobox, msh-like 1	Mus musculus	P13297 (UniProt)
HDRp543	NP_038629	Msx2	homeobox, msh-like 2	Mus musculus	Q03358 (UniProt)
HDRp801	NP_034966	Msx3	homeobox, msh-like 3	Mus musculus	P70354 (UniProt)
HDRp838	NP_082292	Nanog	Nanog homeobox	Mus musculus	Q80Z64 (UniProt)
HDRp823	XP_992115	Nkx1-1	NK1 transcription factor related, locus 1 (Drosophila)	Mus musculus	ENSMUSG00000029112 (Ensembl)
HDRp842	NP_033149	Nkx1-2	NK1 transcription factor related, locus 2 (Drosophila)	Mus musculus	P42580 (UniProt)
HDRp835	NP_033411	Nkx2-1	NK2 homeobox 1	Mus musculus	P50220 (UniProt)
HDRp836	NP_001071100	Nkx2-2	NK2 transcription factor related, locus 2 (Drosophila)	Mus musculus	P42586 (UniProt)
HDRp746	NP_032725	Nkx2-3	NK2 transcription factor related, locus 3 (Drosophila)	Mus musculus	P97334 (UniProt)
HDRp829	NP_075993	Nkx2-4	NK2 transcription factor related, locus 4 (Drosophila)	Mus musculus	Q9EQM3 (UniProt)
HDRp479	NP_032726	Nkx2-5	NK2 transcription factor related, locus 5 (Drosophila)	Mus musculus	P42582 (UniProt)
HDRp480	NP_035050	Nkx2-6	NK2 transcription factor related, locus 6 (Drosophila)	Mus musculus	P43688 (UniProt)
HDRp815	NP_032727	Nkx2-9	NK2 transcription factor related, locus 9 (Drosophila)	Mus musculus	O70584 (UniProt)
HDRp816	NP_035051	Nkx3-1	NK-3 transcription factor, locus 1 (Drosophila)	Mus musculus	P97436 (UniProt)
HDRp806	NP_031550	Nkx3-2	NK3 homeobox 2	Mus musculus	P97503 (UniProt)
HDRp831	NP_659204	Nkx6-1	NK6 transcription factor related, locus 1 (Drosophila)	Mus musculus	Q99MA9 (UniProt)
HDRp1295	NP_899071	Nkx6-2	NK6 homeobox 2	Mus musculus
HDRp810	XP_486090	Nkx6-3	NK6 transcription factor related, locus 3 (Drosophila)	Mus musculus	Q3UHX8 (UniProt)
HDRp522	NP_570939	Nobox	NOBOX oogenesis homeobox	Mus musculus	Q8VIH1 (UniProt)
HDRp1285	NP_001007473	Noto	notochord homolog (Xenopus laevis)	Mus musculus
HDRp1326	XP_001481050	OTTMUSG00000007704	predicted gene, OTTMUSG00000007704	Mus musculus
HDRp1307	XP_928550	OTTMUSG00000007704	predicted gene, OTTMUSG00000007704	Mus musculus
HDRp1327	XP_001476724	OTTMUSG00000017131	predicted gene, OTTMUSG00000017131	Mus musculus
HDRp1300	XP_001473263	OTTMUSG00000017131	predicted gene, OTTMUSG00000017131	Mus musculus
HDRp1297	NP_001078820	OTTMUSG00000017155	predicted gene, OTTMUSG00000017155	Mus musculus
HDRp871	NP_082078	Obox1	oocyte specific homeobox 1	Mus musculus	ENSMUSG00000054310 (Ensembl)
HDRp1254	NP_663753	Obox3	oocyte specific homeobox 3	Mus musculus
HDRp1350	NP_663755	Obox5	oocyte specific homeobox 5	Mus musculus
HDRp826	NP_663756	Obox6	oocyte specific homeobox 6	Mus musculus	ENSMUSG00000041583 (Ensembl)
HDRp444	NP_032288	Onecut1	one cut domain, family member 1	Mus musculus	O08755 (UniProt)
HDRp872	NP_919244	Onecut2	one cut domain, family member 2	Mus musculus	Q6XBJ3 (UniProt)
HDRp832	NP_631972	Onecut3	one cut domain, family member 3	Mus musculus	Q8K557 (UniProt)
HDRp873	NP_035151	Otp	orthopedia homolog (Drosophila)	Mus musculus	O09113 (UniProt)
HDRp743	NP_035153	Otx1	orthodenticle homolog 1 (Drosophila)	Mus musculus	P80205 (UniProt)
HDRp488	NP_659090	Otx2	orthodenticle homolog 2 (Drosophila)	Mus musculus	P80206 (UniProt)
HDRp523	NP_035167	Pax2	paired box gene 2	Mus musculus	P32114 (UniProt)
HDRp489	NP_032807	Pax3	paired box gene 3	Mus musculus	P24610 (UniProt)
HDRp490	NP_035168	Pax4	paired box gene 4	Mus musculus	P32115 (UniProt)
HDRp529	NP_032808	Pax5	paired box gene 5	Mus musculus	Q02650 (UniProt)
HDRp493	NP_038655	Pax6	paired box gene 6	Mus musculus	P63015 (UniProt)
HDRp819	NP_035169	Pax7	paired box gene 7	Mus musculus	P47239 (UniProt)
HDRp737	NP_035171	Pax9	paired box gene 9	Mus musculus	P47242 (UniProt)
HDRp541	NP_032809	Pbx1	pre B-cell leukemia transcription factor 1	Mus musculus	P41778 (UniProt)
HDRp865	NP_059491	Pbx2	pre B-cell leukemia transcription factor 2	Mus musculus	O35984 (UniProt)
HDRp817	NP_058048	Pbx3	pre B-cell leukemia transcription factor 3	Mus musculus	O35317 (UniProt)
HDRp779	NP_001020125	Pbx4	pre-B-cell leukemia homeobox 4	Mus musculus	Q99NE9 (UniProt)
HDRp477	NP_032840	Pdx1	pancreatic and duodenal homeobox 1	Mus musculus	P52946 (UniProt)
HDRp492	NP_032913	Phox2a	paired-like homeobox 2a	Mus musculus	Q62066 (UniProt)
HDRp857	NP_032914	Phox2b	paired-like homeobox 2b	Mus musculus	O35690 (UniProt)
HDRp495	NP_035227	Pitx1	paired-like homeodomain transcription factor 1	Mus musculus	P70314 (UniProt)
HDRp496	NP_001035967	Pitx2	paired-like homeodomain transcription factor 2	Mus musculus	P97474 (UniProt)
HDRp781	NP_032878	Pitx3	paired-like homeodomain transcription factor 3	Mus musculus	O35160 (UniProt)
HDRp497	NP_057879	Pknox1	Pbx/knotted 1 homeobox	Mus musculus	O70477 (UniProt)
HDRp751	NP_001025009	Pknox2	Pbx/knotted 1 homeobox 2	Mus musculus	Q8BG99 (UniProt)
HDRp860	NP_032875	Pou1f1	POU domain, class 1, transcription factor 1 (Pit1, growth hormone factor 1)	Mus musculus	Q00286 (UniProt)
HDRp889	NP_035267	Pou2f1	POU domain, class 2, transcription factor 1	Mus musculus	P25425 (UniProt)
HDRp768	NP_035268	Pou2f2	POU domain, class 2, transcription factor 2	Mus musculus	Q00196 (UniProt)
HDRp866	NP_035269	Pou2f3	POU domain, class 2, transcription factor 3	Mus musculus	P31362 (UniProt)
HDRp727	NP_035271	Pou3f1	POU domain, class 3, transcription factor 1	Mus musculus
HDRp805	NP_032925	Pou3f2	POU domain, class 3, transcription factor 2	Mus musculus	P31360 (UniProt)
HDRp846	NP_032926	Pou3f3	POU domain, class 3, transcription factor 3	Mus musculus	P31361 (UniProt)
HDRp790	NP_032927	Pou3f4	POU domain, class 3, transcription factor 4	Mus musculus	P62515 (UniProt)
HDRp778	NP_035273	Pou4f1	POU domain, class 4, transcription factor 1	Mus musculus	P17208 (UniProt)
HDRp759	NP_620394	Pou4f2	POU domain, class 4, transcription factor 2	Mus musculus	Q63934 (UniProt)
HDRp809	NP_620395	Pou4f3	POU domain, class 4, transcription factor 3	Mus musculus	Q63955 (UniProt)
HDRp498	NP_038661	Pou5f1	POU domain, class 5, transcription factor 1	Mus musculus	P20263 (UniProt)
HDRp726	XP_894663	Pou5f2	POU domain class 5, transcription factor 2	Mus musculus
HDRp848	NP_034257	Pou6f1	POU domain, class 6, transcription factor 1	Mus musculus	Q07916 (UniProt)
HDRp853	NP_778171	Pou6f2	POU domain, class 6, transcription factor 2	Mus musculus	Q8BJI4 (UniProt)
HDRp852	NP_032962	Prop1	paired like homeodomain factor 1	Mus musculus	P97458 (UniProt)
HDRp879	NP_032963	Prox1	prospero-related homeobox 1	Mus musculus	P48437 (UniProt)
HDRp770	NP_780407	Prox2	prospero homeobox 2	Mus musculus	ENSMUSG00000042320 (Ensembl)
HDRp783	NP_001020741	Prrx1	paired related homeobox 1	Mus musculus	P63013 (UniProt)
HDRp786	NP_033142	Prrx2	paired related homeobox 2	Mus musculus	Q06348 (UniProt)
HDRp880	NP_001001796	Prrxl1	paired related homeobox protein-like 1	Mus musculus	Q8BYH0 (UniProt)
HDRp504	NP_038861	Rax	retina and anterior neural fold homeobox	Mus musculus	O35602 (UniProt)
HDRp1364	NP_001020255	Rhox1	reproductive homeobox 1	Mus musculus
HDRp773	NP_001020021	Rhox10	reproductive homeobox 10	Mus musculus	ENSMUSG00000053909 (Ensembl)
HDRp769	NP_941000	Rhox11	reproductive homeobox 11	Mus musculus	ENSMUSG00000051038 (Ensembl)
HDRp1349	NP_001020254	Rhox12	reproductive homeobox 12	Mus musculus
HDRp887	NP_083479	Rhox2a	reproductive homeobox 2A	Mus musculus	ENSMUSG00000051827 (Ensembl)
HDRp1279	NP_001092786	Rhox2b	reproductive homeobox 2B	Mus musculus
HDRp1263	NP_001092788	Rhox2c	reproductive homeobox 2C	Mus musculus
HDRp1336	NP_001075138	Rhox2d	reproductive homeobox 2D	Mus musculus
HDRp1305	NP_001078817	Rhox2e	reproductive homeobox 2E	Mus musculus
HDRp1338	NP_001078825	Rhox2f	reproductive homeobox 2F	Mus musculus
HDRp1269	NP_001107625	Rhox2g	reproductive homeobox 2G	Mus musculus
HDRp1342	XP_001476756	Rhox2h	reproductive homeobox 2H	Mus musculus
HDRp1272	NP_001093935	Rhox2h	reproductive homeobox 2H	Mus musculus
HDRp750		Rhox3a	reproductive homeobox 3A	Mus musculus	ENSMUSG00000059626 (Ensembl)
HDRp1347	NP_001035178	Rhox3f	reproductive homeobox 3F	Mus musculus
HDRp1286	XP_981372	Rhox3g	reproductive homeobox 3G	Mus musculus
HDRp1309	NP_001107629	Rhox3h	reproductive homeobox 3H	Mus musculus
HDRp1273	NP_001034777	Rhox4a	reproductive homeobox 4A	Mus musculus
HDRp1303	NP_067275	Rhox4b	reproductive homeobox 4B	Mus musculus
HDRp1274	NP_001034778	Rhox4c	reproductive homeobox 4C	Mus musculus
HDRp1264	NP_001034784	Rhox4d	reproductive homeobox 4D	Mus musculus
HDRp1316	NP_957688	Rhox4e	reproductive homeobox 4E	Mus musculus
HDRp1282	NP_001034785	Rhox4f	reproductive homeobox 4F	Mus musculus
HDRp1256	NP_001034787	Rhox4g	reproductive homeobox 4G	Mus musculus
HDRp732	NP_032844	Rhox5	reproductive homeobox 5	Mus musculus
HDRp776	NP_032981	Rhox6	reproductive homeobox 6	Mus musculus	ENSMUSG00000006200 (Ensembl)
HDRp1330	NP_001020257	Rhox7	reproductive homeobox 7	Mus musculus
HDRp1331	NP_001020257	Rhox7	reproductive homeobox 7	Mus musculus
HDRp813	NP_001004193	Rhox8	reproductive homeobox 8	Mus musculus	ENSMUSG00000064137 (Ensembl)
HDRp893	NP_076383	Rhox9	reproductive homeobox 9	Mus musculus	ENSMUSG00000068048 (Ensembl)
HDRp763	NP_033148	Satb1	special AT-rich sequence binding protein 1	Mus musculus	Q60611 (UniProt)
HDRp869	NP_631885	Satb2	special AT-rich sequence binding protein 2	Mus musculus	Q8VI24 (UniProt)
HDRp864	NP_032785	Sebox	SEBOX homeobox	Mus musculus	P70368 (UniProt)
HDRp876	NP_038693	Shox2	short stature homeobox 2	Mus musculus	P70390 (UniProt)
HDRp837	NP_033215	Six1	sine oculis-related homeobox 1 homolog (Drosophila)	Mus musculus	Q62231 (UniProt)
HDRp544	NP_035510	Six2	sine oculis-related homeobox 2 homolog (Drosophila)	Mus musculus	Q62232 (UniProt)
HDRp509	NP_035511	Six3	sine oculis-related homeobox 3 homolog (Drosophila)	Mus musculus	Q62233 (UniProt)
HDRp499	NP_035512	Six4	sine oculis-related homeobox 4 homolog (Drosophila)	Mus musculus	Q61321 (UniProt)
HDRp502	NP_035513	Six5	sine oculis-related homeobox 5 homolog (Drosophila)	Mus musculus	P70178 (UniProt)
HDRp883	NP_035514	Six6	sine oculis-related homeobox 6 homolog (Drosophila)	Mus musculus	Q9QZ28 (UniProt)
HDRp858	NP_033398	Tgif1	TG interacting factor 1	Mus musculus	P70284 (UniProt)
HDRp765	NP_775572	Tgif2	TGFB-induced factor 2	Mus musculus	Q8C0Y1 (UniProt)
HDRp870	NP_694749	Tgif2lx	TGFB-induced factor homeobox 2-like, X-linked	Mus musculus	ENSMUSG00000061283 (Ensembl)
HDRp515	NP_068701	Tlx1	T-cell leukemia, homeobox 1	Mus musculus	P43345 (UniProt)
HDRp552	NP_033418	Tlx2	T-cell leukemia, homeobox 2	Mus musculus	Q61663 (UniProt)
HDRp812	NP_064300	Tlx3	T-cell leukemia, homeobox 3	Mus musculus	O55144 (UniProt)
HDRp1270	NP_001074769	Tshz1	teashirt zinc finger family member 1	Mus musculus
HDRp1323	NP_536703	Tshz2	teashirt zinc finger family member 2	Mus musculus
HDRp862	NP_758502	Tshz3	teashirt zinc finger family member 3	Mus musculus	Q8CGV9 (UniProt)
HDRp799	NP_038730	Uncx	UNC homeobox	Mus musculus	O08934 (UniProt)
HDRp849	NP_033527	Vax1	ventral anterior homeobox containing gene 1	Mus musculus	Q2NKI2 (UniProt)
HDRp748	NP_036042	Vax2	ventral anterior homeobox containing gene 2	Mus musculus	Q9WTP9 (UniProt)
HDRp841	NP_473409	Vsx1	visual system homeobox 1 homolog (zebrafish)	Mus musculus	Q91V10 (UniProt)
HDRp431	NP_031727	Vsx2	visual system homeobox 2	Mus musculus	Q61412 (UniProt)
HDRp845	NP_035676	Zeb1	zinc finger E-box binding homeobox 1	Mus musculus	Q64318 (UniProt)
HDRp811	NP_056568	Zeb2	zinc finger E-box binding homeobox 2	Mus musculus	Q9R0G7 (UniProt)
HDRp1310	NP_001034287	Zfhx2	zinc finger homeobox 2	Mus musculus
HDRp1311	NP_001034287	Zfhx2	zinc finger homeobox 2	Mus musculus
HDRp1312	NP_001034287	Zfhx2	zinc finger homeobox 2	Mus musculus
HDRp804	NP_031522	Zfhx3	zinc finger homeobox 3	Mus musculus	Q61329 (UniProt)
HDRp881	NP_109633	Zfhx4	zinc finger homeodomain 4	Mus musculus	Q9JJN2 (UniProt)
HDRp516	NP_001035903	Zhx1	zinc fingers and homeoboxes 1	Mus musculus	P70121 (UniProt)
HDRp548	NP_955520	Zhx2	zinc fingers and homeoboxes 2	Mus musculus	Q8C0C0 (UniProt)
HDRp508	NP_796237	Zhx3	zinc fingers and homeoboxes 3	Mus musculus	Q8C0Q2 (UniProt)
HDRp549	XP_001475936			Mus musculus	Q03358 (UniProt)
HDRp863				Mus musculus	ENSMUSG00000044538 (Ensembl)
HDRp1247	XP_001478836			Mus musculus
HDRp1383	ABC41924			Nematostella vectensis
HDRp1381	ABC16639			Nematostella vectensis
HDRp1473	ABB86435			Nematostella vectensis
HDRp1395	ABB86497			Nematostella vectensis
HDRp1436	ABC16638			Nematostella vectensis
HDRp1371	ABB83751			Nematostella vectensis
HDRp1431	ABB86454			Nematostella vectensis
HDRp1417	ABB86470			Nematostella vectensis
HDRp1488	ABB83747			Nematostella vectensis
HDRp1469	ABB86443			Nematostella vectensis
HDRp1446	ABB83731			Nematostella vectensis
HDRp1476	ABB72462			Nematostella vectensis
HDRp1412	ABB86466			Nematostella vectensis
HDRp1391	ABB86469			Nematostella vectensis
HDRp1483	ABB86509			Nematostella vectensis
HDRp1404	ABB86501			Nematostella vectensis
HDRp1374	ABB86460			Nematostella vectensis
HDRp1439	ABB86430			Nematostella vectensis
HDRp1418	ABB86447			Nematostella vectensis
HDRp1427	ABB86440			Nematostella vectensis
HDRp1430	ABB83739			Nematostella vectensis
HDRp1399	ABB86507			Nematostella vectensis
HDRp1463	ABB86449			Nematostella vectensis
HDRp1423	ABB86441			Nematostella vectensis
HDRp1410	ABB86445			Nematostella vectensis
HDRp1478	ABB86473			Nematostella vectensis
HDRp1387	ABB86484			Nematostella vectensis
HDRp1454	ABB86437			Nematostella vectensis
HDRp1434	ABB83736			Nematostella vectensis
HDRp1424	ABB29575			Nematostella vectensis
HDRp1482	ABC16640			Nematostella vectensis
HDRp1389	ABB86429			Nematostella vectensis
HDRp1470	ABB86498			Nematostella vectensis
HDRp1407	ABB86462			Nematostella vectensis
HDRp1378	ABB86472			Nematostella vectensis
HDRp1472	ABB83748			Nematostella vectensis
HDRp1484	ABB86486			Nematostella vectensis
HDRp1456	ABB72467			Nematostella vectensis
HDRp1449	ABB86508			Nematostella vectensis
HDRp1406	ABB86442			Nematostella vectensis
HDRp1464	ABC16642			Nematostella vectensis
HDRp1375	ABB86457			Nematostella vectensis
HDRp1494	ABB83749			Nematostella vectensis
HDRp1415	ABB86499			Nematostella vectensis
HDRp1475	ABB86465			Nematostella vectensis
HDRp1477	ABB83745			Nematostella vectensis
HDRp1465	ABB83733			Nematostella vectensis
HDRp1445	ABB86502			Nematostella vectensis
HDRp1455	ABB86494			Nematostella vectensis
HDRp1443	ABB86500			Nematostella vectensis
HDRp1435	ABB86475			Nematostella vectensis
HDRp1421	ABB83743			Nematostella vectensis
HDRp1492	ABB83742			Nematostella vectensis
HDRp1495	ABB86474			Nematostella vectensis
HDRp1441	ABB86433			Nematostella vectensis
HDRp1485	ABB72463			Nematostella vectensis
HDRp1380	ABB86436			Nematostella vectensis
HDRp1422	ABB29576			Nematostella vectensis
HDRp1401	ABB86444			Nematostella vectensis
HDRp1420	ABB86438			Nematostella vectensis
HDRp1480	ABB86446			Nematostella vectensis
HDRp1433	ABB86489			Nematostella vectensis
HDRp1452	ABB86490			Nematostella vectensis
HDRp1413	ABB86463			Nematostella vectensis
HDRp1487	ABB72471			Nematostella vectensis
HDRp1393	ABB86448			Nematostella vectensis
HDRp1400	ABB86496			Nematostella vectensis
HDRp1379	ABB86485			Nematostella vectensis
HDRp1416	ABB86476			Nematostella vectensis
HDRp1425	ABB86491			Nematostella vectensis
HDRp1373	ABB86495			Nematostella vectensis
HDRp1498	ABB86425			Nematostella vectensis
HDRp1490	AAD39349			Nematostella vectensis
HDRp1403	ABB72466			Nematostella vectensis
HDRp1426	ABB86426			Nematostella vectensis
HDRp1491	ABB86504			Nematostella vectensis
HDRp1447	ABB86471			Nematostella vectensis
HDRp1460	ABB86432			Nematostella vectensis
HDRp1489	ABB86461			Nematostella vectensis
HDRp1409	ABB86488			Nematostella vectensis
HDRp1468	ABB83750			Nematostella vectensis
HDRp1414	ABB86493			Nematostella vectensis
HDRp1428	ABB86506			Nematostella vectensis
HDRp1384	ABB83746			Nematostella vectensis
HDRp1394	ABB86505			Nematostella vectensis
HDRp1486	ABB86483			Nematostella vectensis
HDRp1438	ABB86455			Nematostella vectensis
HDRp1411	ABB86451			Nematostella vectensis
HDRp1493	ABB29580			Nematostella vectensis
HDRp1388	ABB29578			Nematostella vectensis
HDRp1398	ABB86478			Nematostella vectensis
HDRp1390	ABB86439			Nematostella vectensis
HDRp1382	ABB86431			Nematostella vectensis
HDRp1467	ABB83735			Nematostella vectensis
HDRp1448	ABB86428			Nematostella vectensis
HDRp1376	ABB86464			Nematostella vectensis
HDRp1466	ABB83744			Nematostella vectensis
HDRp1500	ABB83753			Nematostella vectensis
HDRp1497	ABB72469			Nematostella vectensis
HDRp1481	ABB72464			Nematostella vectensis
HDRp1385	ABB86453			Nematostella vectensis
HDRp1432	ABB86481			Nematostella vectensis
HDRp1429	ABB86434			Nematostella vectensis
HDRp1392	ABB86480			Nematostella vectensis
HDRp1437	ABB86503			Nematostella vectensis
HDRp1386	ABB86456			Nematostella vectensis
HDRp1461	ABB86427			Nematostella vectensis
HDRp1479	ABB86492			Nematostella vectensis
HDRp1419	ABB83752			Nematostella vectensis
HDRp1451	ABB29579			Nematostella vectensis
HDRp1408	ABB86452			Nematostella vectensis
HDRp1396	ABB86450			Nematostella vectensis
HDRp1442	ABB83741			Nematostella vectensis
HDRp1440	ABB86458			Nematostella vectensis
HDRp1444	ABB83737			Nematostella vectensis
HDRp1471	ABB86468			Nematostella vectensis
HDRp1397	ABB86467			Nematostella vectensis
HDRp1458	ABC16641			Nematostella vectensis
HDRp1462	ABB72465			Nematostella vectensis
HDRp1496	ABB83732			Nematostella vectensis
HDRp1372	ABB83740			Nematostella vectensis
HDRp1457	ABB72470			Nematostella vectensis
HDRp1377	ABB83738			Nematostella vectensis
HDRp1474	ABB86510			Nematostella vectensis
HDRp1499	ABB72468			Nematostella vectensis
HDRp1450	ABB86477			Nematostella vectensis
HDRp1453	ABB86482			Nematostella vectensis
HDRp1405	ABB86487			Nematostella vectensis
HDRp1402	ABB86479			Nematostella vectensis
HDRp1459	ABB83734			Nematostella vectensis
HDRp1562	XP_957224	LOC3873387		Neurospora crassa
HDRp1564	XP_958775	LOC3874922		Neurospora crassa
HDRp1565	XP_961320	LOC3877484		Neurospora crassa
HDRp1567	XP_961794	LOC3877942		Neurospora crassa
HDRp1566	XP_964163	LOC3880321		Neurospora crassa
HDRp1563	XP_964419	LOC3880568		Neurospora crassa
HDRp532				Oncorhynchus tshawytscha	P53408 (UniProt)
HDRp1860	XP_001462473	LOC5008693		Paramecium tetraurelia strain d4-2
HDRp1861	XP_001425893	LOC5011677		Paramecium tetraurelia strain d4-2
HDRp1865	XP_001425939	LOC5011723		Paramecium tetraurelia strain d4-2
HDRp1869	XP_001427231	LOC5013015		Paramecium tetraurelia strain d4-2
HDRp1874	XP_001429664	LOC5015448		Paramecium tetraurelia strain d4-2
HDRp1872	XP_001432788	LOC5018573		Paramecium tetraurelia strain d4-2
HDRp1873	XP_001436969	LOC5022754		Paramecium tetraurelia strain d4-2
HDRp1868	XP_001442611	LOC5028396		Paramecium tetraurelia strain d4-2
HDRp1864	XP_001451819	LOC5037604		Paramecium tetraurelia strain d4-2
HDRp1867	XP_001455625	LOC5041410		Paramecium tetraurelia strain d4-2
HDRp1870	XP_001455667	LOC5041452		Paramecium tetraurelia strain d4-2
HDRp1863	XP_001458755	LOC5044540		Paramecium tetraurelia strain d4-2
HDRp1862	XP_001458859	LOC5044644		Paramecium tetraurelia strain d4-2
HDRp1866	XP_001459243	LOC5045028		Paramecium tetraurelia strain d4-2
HDRp1871	XP_001461542	LOC5047327		Paramecium tetraurelia strain d4-2
HDRp989	NP_073172	Adnp	activity-dependent neuroprotective protein	Rattus norvegicus	Q9JKL8 (UniProt)
HDRp1006	NP_001120845	Adnp2	ADNP homeobox 2	Rattus norvegicus	ENSRNOG00000017667 (Ensembl)
HDRp905	NP_001100023	Alx4	aristaless 4	Rattus norvegicus	ENSRNOG00000000008 (Ensembl)
HDRp1038	NP_476450	Barhl1	BarH-like 1 (Drosophila)	Rattus norvegicus	P63156 (UniProt)
HDRp939	NP_075245	Barhl2	BarH-like 2 (Drosophila)	Rattus norvegicus	O88181 (UniProt)
HDRp909	NP_001102350	Barx1	BarH-like homeobox 1	Rattus norvegicus	ENSRNOG00000016915 (Ensembl)
HDRp1062	XP_001054100	Barx2	BarH-like homeobox 2	Rattus norvegicus	ENSRNOG00000008592 (Ensembl)
HDRp911	XP_576393	Bsx	brain specific homeobox	Rattus norvegicus	ENSRNOG00000024438 (Ensembl)
HDRp428	NP_037053	Cart1	ALX homeobox 1	Rattus norvegicus	Q63087 (UniProt)
HDRp929	XP_344692	Cdx1	caudal type homeo box 1	Rattus norvegicus	Q05095 (UniProt)
HDRp1080	NP_001100412	Cdx4	caudal type homeo box 4	Rattus norvegicus	ENSRNOG00000002974 (Ensembl)
HDRp988	XP_577474	Cphx	cytoplasmic polyadenylated homeobox	Rattus norvegicus	ENSRNOG00000025433 (Ensembl)
HDRp947	NP_068627	Crx	cone-rod homeobox containing gene	Rattus norvegicus	ENSRNOG00000013890 (Ensembl)
HDRp1000	XP_347164	Cux1	cut-like homeobox 1	Rattus norvegicus	P53565 (UniProt)
HDRp904	NP_001099401	Cux2	cut-like homeobox 2	Rattus norvegicus	ENSRNOG00000001259 (Ensembl)
HDRp968	NP_001009644	Dbx1	developing brain homeobox 1	Rattus norvegicus	Q5NSW5 (UniProt)
HDRp910	XP_001053826	Dbx2		Rattus norvegicus	ENSRNOG00000006885 (Ensembl)
HDRp897	XP_230987	Dlx1	distal-less homeobox 1	Rattus norvegicus	Q64202 (UniProt)
HDRp1036	XP_230986	Dlx2	distal-less homeobox 2	Rattus norvegicus	Q64204 (UniProt)
HDRp973	NP_001099302	Dlx3	distal-less homeobox 3	Rattus norvegicus	ENSRNOG00000004278 (Ensembl)
HDRp1058	NP_001100510	Dlx4	distal-less homeobox 4	Rattus norvegicus	ENSRNOG00000004399 (Ensembl)
HDRp438	NP_037075	Dlx5	distal-less homeobox 5	Rattus norvegicus	P50575 (UniProt)
HDRp1050	NP_001101431	Dmbx1	diencephalon/mesencephalon homeobox 1	Rattus norvegicus	ENSRNOG00000010835 (Ensembl)
HDRp984	XP_224643	Duxbl	double homeobox B-like	Rattus norvegicus	ENSRNOG00000025408 (Ensembl)
HDRp977	XP_575584	Emx1	empty spiracles homolog 1 (Drosophila)	Rattus norvegicus	ENSRNOG00000015493 (Ensembl)
HDRp961	NP_001102639	Emx2	empty spiracles homeobox 2	Rattus norvegicus	ENSRNOG00000009482 (Ensembl)
HDRp914	NP_001102684	En2	engrailed 2	Rattus norvegicus	ENSRNOG00000006846 (Ensembl)
HDRp919	XP_575482	Evx1	even skipped homeotic gene 1 homolog	Rattus norvegicus	ENSRNOG00000007950 (Ensembl)
HDRp908	XP_221512	Evx2	even skipped homeotic gene 2	Rattus norvegicus	ENSRNOG00000001589 (Ensembl)
HDRp975	XP_001063850	Gbx1	gastrulation brain homeobox 1	Rattus norvegicus	ENSRNOG00000013369 (Ensembl)
HDRp974	XP_346073	Gbx2	gastrulation brain homeobox 2	Rattus norvegicus	ENSRNOG00000019495 (Ensembl)
HDRp1063	XP_343102	Gsc	goosecoid homeobox	Rattus norvegicus	ENSRNOG00000010605 (Ensembl)
HDRp915	NP_001102316	Gscl	goosecoid-like	Rattus norvegicus	ENSRNOG00000000282 (Ensembl)
HDRp990	XP_221885	Gsx1	GS homeobox 1	Rattus norvegicus	ENSRNOG00000000952 (Ensembl)
HDRp900	XP_344234	Gsx2	GS homeobox 2	Rattus norvegicus	ENSRNOG00000002266 (Ensembl)
HDRp1078	NP_001102576	Hesx1	homeo box gene expressed in ES cells	Rattus norvegicus	ENSRNOG00000014133 (Ensembl)
HDRp1074	NP_077361	Hhex	hematopoietically expressed homeobox	Rattus norvegicus	ENSRNOG00000016595 (Ensembl)
HDRp981	NP_001071142	Hlx	H2.0-like homeobox	Rattus norvegicus	A0JPN1 (UniProt)
HDRp1059	XP_224289	Hmbox1	homeobox containing 1	Rattus norvegicus	ENSRNOG00000013326 (Ensembl)
HDRp916	NP_001101833	Hmx1	H6 homeo box 1	Rattus norvegicus	ENSRNOG00000009154 (Ensembl)
HDRp1025	NP_001099773	Hmx2	H6 homeo box 2	Rattus norvegicus	ENSRNOG00000020638 (Ensembl)
HDRp969	NP_001099772	Hmx3	H6 homeo box 3	Rattus norvegicus	ENSRNOG00000020637 (Ensembl)
HDRp1054	NP_690062	Homez	homeodomain leucine zipper-encoding gene	Rattus norvegicus	Q8K3E9 (UniProt)
HDRp1066	NP_598305	Hopx	HOP homeobox	Rattus norvegicus	Q78ZR5 (UniProt)
HDRp960	NP_037207	Hoxa1	homeo box A1	Rattus norvegicus	O08656 (UniProt)
HDRp954	XP_347221	Hoxa10	homeo box A10	Rattus norvegicus	ENSRNOG00000027246 (Ensembl)
HDRp932	XP_575481	Hoxa13	homeo box A13	Rattus norvegicus	ENSRNOG00000007928 (Ensembl)
HDRp920	NP_036713	Hoxa2	homeo box A2	Rattus norvegicus	P31246 (UniProt)
HDRp1037		Hoxa4	homeo box A4	Rattus norvegicus	P09635 (UniProt)
HDRp1049	XP_001064984	Hoxa5	homeo box A5	Rattus norvegicus	P52949 (UniProt)
HDRp937	XP_001065038	Hoxa6	homeobox A6	Rattus norvegicus	ENSRNOG00000006530 (Ensembl)
HDRp907	NP_001102703	Hoxa9	homeobox A9	Rattus norvegicus	P09634 (UniProt)
HDRp931	XP_001057018	Hoxa9_predicted	homeobox A9-like	Rattus norvegicus	ENSRNOG00000006906 (Ensembl)
HDRp941	XP_220896	Hoxb1	homeo box B1	Rattus norvegicus	ENSRNOG00000008506 (Ensembl)
HDRp986	NP_001100511	Hoxb13	homeo box B13	Rattus norvegicus	ENSRNOG00000007491 (Ensembl)
HDRp1042	NP_001100512	Hoxb3	homeo box B3	Rattus norvegicus	ENSRNOG00000008313 (Ensembl)
HDRp1017	XP_573184	Hoxb4	homeo box B4	Rattus norvegicus	ENSRNOG00000008191 (Ensembl)
HDRp896	XP_573183	Hoxb5	homeo box B5	Rattus norvegicus	ENSRNOG00000008010 (Ensembl)
HDRp1001	XP_573182	Hoxb6	homeo box B6	Rattus norvegicus	ENSRNOG00000007823 (Ensembl)
HDRp991	NP_001017480	Hoxb7	homeo box B7	Rattus norvegicus	P18864 (UniProt)
HDRp926	XP_220888	Hoxb8	homeo box B8	Rattus norvegicus	P18863 (UniProt)
HDRp955	NP_001093967	Hoxb9	homeo box B9	Rattus norvegicus	ENSRNOG00000007573 (Ensembl)
HDRp946	XP_235698	Hoxc10	homeo box C10	Rattus norvegicus	ENSRNOG00000016149 (Ensembl)
HDRp949	NP_001100266	Hoxc12	homeo box C12	Rattus norvegicus	ENSRNOG00000016116 (Ensembl)
HDRp902	XP_235695	Hoxc13	homeobox C13	Rattus norvegicus	ENSRNOG00000028679 (Ensembl)
HDRp951	NP_001103354	Hoxc4	homeo box C4	Rattus norvegicus	P18865 (UniProt)
HDRp1031	NP_001101586	Hoxc5	homeo box C5	Rattus norvegicus	ENSRNOG00000016598 (Ensembl)
HDRp1033	XP_345883	Hoxc6	homeo box C6	Rattus norvegicus	ENSRNOG00000016199 (Ensembl)
HDRp933	XP_347336	Hoxc9	homeobox C9	Rattus norvegicus	P18866 (UniProt)
HDRp999	NP_001099354	Hoxd1	homeo box D1	Rattus norvegicus	ENSRNOG00000001572 (Ensembl)
HDRp987	NP_001100564	Hoxd10	homeo box D10	Rattus norvegicus	ENSRNOG00000001581 (Ensembl)
HDRp1051	XP_345374	Hoxd12	homeo box D12	Rattus norvegicus	ENSRNOG00000001587 (Ensembl)
HDRp945	NP_001099356	Hoxd13	homeo box D13	Rattus norvegicus	ENSRNOG00000001588 (Ensembl)
HDRp1035	XP_213633	Hoxd3	homeo box D3	Rattus norvegicus	P18867 (UniProt)
HDRp901	NP_001099355	Hoxd4	homeo box D4	Rattus norvegicus	ENSRNOG00000001578 (Ensembl)
HDRp1016	XP_001069122	Hoxd9	homeo box D9	Rattus norvegicus	ENSRNOG00000001580 (Ensembl)
HDRp1072	NP_001034594	Irx2	Iroquois related homeobox 2 (Drosophila)	Rattus norvegicus	ENSRNOG00000012742 (Ensembl)
HDRp927	EDL87557	Irx3	Iroquois related homeobox 3 (Drosophila)	Rattus norvegicus	ENSRNOG00000011533 (Ensembl)
HDRp1011	NP_001100800	Irx4	Iroquois related homeobox 4 (Drosophila)	Rattus norvegicus	ENSRNOG00000012720 (Ensembl)
HDRp1008	NP_001025215	Irx5	iroquois homeobox 5	Rattus norvegicus	ENSRNOG00000011180 (Ensembl)
HDRp1048	NP_001095883	Irx6	Iroquois related homeobox 6 (Drosophila)	Rattus norvegicus	ENSRNOG00000011037 (Ensembl)
HDRp470	NP_059035	Isl1	ISL1 transcription factor, LIM/homeodomain 1	Rattus norvegicus	P61374 (UniProt)
HDRp472	NP_065204	Isl2	insulin related protein 2 (islet 2)	Rattus norvegicus	P50480 (UniProt)
HDRp995	XP_001053324	LOC678795		Rattus norvegicus	ENSRNOG00000013237 (Ensembl)
HDRp1021	XP_001054603	LOC680117	similar to T-cell leukemia homeobox protein 2 (Homeobox protein Hox-11L1) (Homeobox TLX-2) (PMUR10F)	Rattus norvegicus	ENSRNOG00000008343 (Ensembl)
HDRp964	XP_001070326	LOC686117	similar to myeloid ecotropic viral integration site 1	Rattus norvegicus	ENSRNOG00000004606 (Ensembl)
HDRp971	XP_001077350	LOC691244	similar to extraembryonic, spermatogenesis, homeobox 1-like	Rattus norvegicus	ENSRNOG00000028050 (Ensembl)
HDRp1022	NP_001028872	Lass2	LAG1 homolog, ceramide synthase 2	Rattus norvegicus	ENSRNOG00000021138 (Ensembl)
HDRp1071	NP_001121033	Lass3	LAG1 homolog, ceramide synthase 3	Rattus norvegicus	ENSRNOG00000013823 (Ensembl)
HDRp1030	NP_001100587	Lass4	LAG1 homolog, ceramide synthase 4	Rattus norvegicus	ENSRNOG00000001072 (Ensembl)
HDRp1070	NP_001102463	Lass5	LAG1 homolog, ceramide synthase 5	Rattus norvegicus	ENSRNOG00000019380 (Ensembl)
HDRp1249	XP_345364	Lass6	LAG1 homolog, ceramide synthase 6	Rattus norvegicus
HDRp979	NP_001040573	Lbx1	ladybird homeobox homolog 1 (Drosophila)	Rattus norvegicus	Q1XID0 (UniProt)
HDRp959	NP_001102714	Lbx2	ladybird homeobox homolog 2 (Drosophila)	Rattus norvegicus	ENSRNOG00000008466 (Ensembl)
HDRp1024	NP_665887	Lhx1	LIM homeobox protein 1	Rattus norvegicus	P63007 (UniProt)
HDRp1018	NP_001100041	Lhx2_predicted	LIM homeobox protein 2	Rattus norvegicus	ENSRNOG00000010551 (Ensembl)
HDRp1005	XP_001059910	Lhx3	LIM homeobox protein 3	Rattus norvegicus	ENSRNOG00000018427 (Ensembl)
HDRp923	NP_620605	Lhx5	LIM homeobox protein 5	Rattus norvegicus	P61376 (UniProt)
HDRp1032	NP_001101307	Lhx6	LIM homeobox protein 6	Rattus norvegicus	ENSRNOG00000005996 (Ensembl)
HDRp1065	NP_001012219	Lhx8_predicted	LIM homeobox protein 8	Rattus norvegicus	ENSRNOG00000028348 (Ensembl)
HDRp906	NP_852032	Lhx9	LIM homeobox 9	Rattus norvegicus	ENSRNOG00000010357 (Ensembl)
HDRp953	NP_001099437	Lmx1a	LIM homeobox transcription factor 1 alpha	Rattus norvegicus	ENSRNOG00000004642 (Ensembl)
HDRp966	XP_342420	Lmx1b	LIM homeobox transcription factor 1 beta	Rattus norvegicus	ENSRNOG00000017019 (Ensembl)
HDRp1009	NP_001101228	Meis2	Meis1, myeloid ecotropic viral integration site 1 homolog 2	Rattus norvegicus	ENSRNOG00000004730 (Ensembl)
HDRp967	NP_001101942	Meis3	Meis homeobox 3	Rattus norvegicus	ENSRNOG00000021390 (Ensembl)
HDRp940	NP_001102307	Meox1	mesenchyme homeobox 1	Rattus norvegicus	ENSRNOG00000020803 (Ensembl)
HDRp899	NP_058845	Meox2	mesenchyme homeobox 2	Rattus norvegicus	P39020 (UniProt)
HDRp1034	NP_001099449	Mixl1	Mix1 homeobox-like 1 (Xenopus laevis)	Rattus norvegicus	ENSRNOG00000003176 (Ensembl)
HDRp1026	XP_214497	Mkx	mohawk homeobox	Rattus norvegicus	ENSRNOG00000018938 (Ensembl)
HDRp994	NP_112321	Msx1	homeo box, msh-like 1	Rattus norvegicus	ENSRNOG00000006876 (Ensembl)
HDRp921	NP_037114	Msx2	msh homeobox 2	Rattus norvegicus	P52953 (UniProt)
HDRp983	BAE92723	Msx3	homeo box, msh-like 3	Rattus norvegicus	ENSRNOG00000018324 (Ensembl)
HDRp944	XP_575662	Nanog	Nanog homeobox	Rattus norvegicus	ENSRNOG00000008368 (Ensembl)
HDRp1041	XP_234082	Nkx1-1	NK1 transcription factor related, locus 1 (Drosophila)	Rattus norvegicus	ENSRNOG00000005113 (Ensembl)
HDRp1029	XP_219437	Nkx1-2	NK1 transcription factor related, locus 2 (Drosophila)	Rattus norvegicus	ENSRNOG00000017006 (Ensembl)
HDRp1068	XP_345447	Nkx2-2	NK2 transcription factor related, locus 2 (Drosophila)	Rattus norvegicus	ENSRNOG00000012728 (Ensembl)
HDRp1076	NP_001101064	Nkx2-3	NK2 transcription factor related, locus 3 (Drosophila)	Rattus norvegicus	ENSRNOG00000016656 (Ensembl)
HDRp898	XP_345446	Nkx2-4	NK2 transcription factor related, locus 4 (Drosophila)	Rattus norvegicus	ENSRNOG00000012647 (Ensembl)
HDRp1019	NP_446103	Nkx2-5	NK2 transcription factor related, locus 5 (Drosophila)	Rattus norvegicus	O35767 (UniProt)
HDRp958	NP_001121125	Nkx2-6	NK2 transcription factor related, locus 6 (Drosophila)	Rattus norvegicus	ENSRNOG00000021910 (Ensembl)
HDRp1039	NP_001100202	Nkx2-9	NK2 transcription factor related, locus 9 (Drosophila)	Rattus norvegicus	ENSRNOG00000022970 (Ensembl)
HDRp1047	NP_001029316	Nkx3-1	NK-3 transcription factor, locus 1 (Drosophila)	Rattus norvegicus	ENSRNOG00000015477 (Ensembl)
HDRp482	NP_113925	Nkx6-1	NK6 transcription factor related, locus 1 (Drosophila)	Rattus norvegicus	O35762 (UniProt)
HDRp1081	NP_001102925	Nkx6-3	NK6 homeobox 3	Rattus norvegicus	ENSRNOG00000018147 (Ensembl)
HDRp1053	XP_578257	Nobox	NOBOX oogenesis homeobox	Rattus norvegicus	ENSRNOG00000025720 (Ensembl)
HDRp1012	XP_218245	Obox2	oocyte specific homeobox 2	Rattus norvegicus	ENSRNOG00000021972 (Ensembl)
HDRp1023	XP_218300	Obox6	oocyte specific homeobox 6	Rattus norvegicus	ENSRNOG00000022151 (Ensembl)
HDRp445	NP_073162	Onecut1	one cut domain, family member 1	Rattus norvegicus	P70512 (UniProt)
HDRp1052	XP_215445	Otp	orthopedia homolog (Drosophila)	Rattus norvegicus	ENSRNOG00000010560 (Ensembl)
HDRp895	NP_037241	Otx1	orthodenticle homolog 1 (Drosophila)	Rattus norvegicus	Q63410 (UniProt)
HDRp1027	XP_001057814	Otx2	orthodenticle homolog 2 (Drosophila)	Rattus norvegicus	Q64201 (UniProt)
HDRp943	XP_343602	Pax3	paired box gene 3	Rattus norvegicus	ENSRNOG00000013670 (Ensembl)
HDRp1075	NP_113987	Pax4	paired box gene 4	Rattus norvegicus	O88436 (UniProt)
HDRp952	NP_037133	Pax6	paired box gene 6	Rattus norvegicus	P63016 (UniProt)
HDRp1013	XP_575941	Pax7	paired box gene 7	Rattus norvegicus	ENSRNOG00000018739 (Ensembl)
HDRp928	NP_001002828	Pbx2	pre-B-cell leukemia transcription factor 2	Rattus norvegicus	Q63495 (UniProt)
HDRp972	NP_001101304	Pbx3	pre B-cell leukemia transcription factor 3	Rattus norvegicus	ENSRNOG00000022162 (Ensembl)
HDRp997	NP_001101869	Pbx4	pre-B-cell leukemia homeobox 4	Rattus norvegicus	ENSRNOG00000010736 (Ensembl)
HDRp1002	NP_446321	Phox2a	paired-like homeobox 2a	Rattus norvegicus	Q62782 (UniProt)
HDRp1077	XP_344240	Phox2b	paired-like homeobox 2b	Rattus norvegicus	ENSRNOG00000002299 (Ensembl)
HDRp976	NP_446076	Pitx1	paired-like homeodomain transcription factor 1	Rattus norvegicus	Q99NA7 (UniProt)
HDRp1061	NP_001035970	Pitx2	paired-like homeodomain transcription factor 2	Rattus norvegicus	Q9R0W1 (UniProt)
HDRp1040	NP_062120	Pitx3	paired-like homeodomain transcription factor 3	Rattus norvegicus	P81062 (UniProt)
HDRp970	NP_001013092	Pknox1	Pbx/knotted 1 homeobox	Rattus norvegicus	ENSRNOG00000001184 (Ensembl)
HDRp494	NP_037140	Pou1f1	POU class 1 homeobox 1	Rattus norvegicus	P10037 (UniProt)
HDRp936	XP_341149	Pou2f1	POU domain, class 2, transcription factor 1	Rattus norvegicus	P31503 (UniProt)
HDRp925	XP_341803	Pou2f2	POU domain, class 2, transcription factor 2	Rattus norvegicus	ENSRNOG00000020381 (Ensembl)
HDRp1079	NP_001099215	Pou2f3	POU domain, class 2, transcription factor 3	Rattus norvegicus	P42571 (UniProt)
HDRp912	NP_742082	Pou3f2	POU domain, class 3, transcription factor 2	Rattus norvegicus	P56222 (UniProt)
HDRp1057	NP_058948	Pou3f4	POU domain, class 3, transcription factor 4	Rattus norvegicus	P62516 (UniProt)
HDRp1056	XP_341373	Pou4f1	POU domain, class 4, transcription factor 1	Rattus norvegicus	P20266 (UniProt)
HDRp930	XP_344757	Pou4f2	POU domain, class 4, transcription factor 2	Rattus norvegicus	ENSRNOG00000012167 (Ensembl)
HDRp922	NP_001102359	Pou4f3	POU domain, class 4, transcription factor 3	Rattus norvegicus	ENSRNOG00000018842 (Ensembl)
HDRp948	NP_001075220	Pou5f2	POU domain class 5, transcription factor 2	Rattus norvegicus	P56225 (UniProt)
HDRp1044	NP_001099216	Pou6f1	POU domain, class 6, transcription factor 1	Rattus norvegicus	P56223 (UniProt)
HDRp938	NP_705891	Prop1	paired like homeodomain factor 1	Rattus norvegicus	ENSRNOG00000003671 (Ensembl)
HDRp980	XP_223067	Prox1	prospero-related homeobox 1	Rattus norvegicus	ENSRNOG00000003694 (Ensembl)
HDRp965	XP_234418	Prox2	prospero homeobox 2	Rattus norvegicus	ENSRNOG00000005054 (Ensembl)
HDRp963	NP_722543	Prrx1	paired related homeobox 1	Rattus norvegicus	P63014 (UniProt)
HDRp993	NP_001099209	Prrx2	paired related homeobox 2	Rattus norvegicus	ENSRNOG00000006299 (Ensembl)
HDRp1055	NP_665710	Prrxl1	paired related homeobox protein-like 1	Rattus norvegicus	Q62798 (UniProt)
HDRp985	XP_345882	RGD1305450	similar to Homeobox protein Hox-C11	Rattus norvegicus	ENSRNOG00000016141 (Ensembl)
HDRp1010	XP_001058923	RGD1561431	similar to homeobox-containing transcription factor	Rattus norvegicus	ENSRNOG00000006281 (Ensembl)
HDRp1083	XP_575377	RGD1561539	similar to Homeobox protein DLX-6	Rattus norvegicus	ENSRNOG00000010822 (Ensembl)
HDRp913	XP_574776	RGD1565550	similar to double homeobox, 4	Rattus norvegicus	ENSRNOG00000028669 (Ensembl)
HDRp917	NP_001123350	RGD1566402	similar to homeobox protein	Rattus norvegicus	ENSRNOG00000007627 (Ensembl)
HDRp934	NP_446130	Rax	retina and anterior neural fold homeobox	Rattus norvegicus	Q9JLT7 (UniProt)
HDRp1073	NP_001020044	Rhox11	reproductive homeobox 11	Rattus norvegicus	ENSRNOG00000028044 (Ensembl)
HDRp1069	NP_001020060	Rhox4g	reproductive homeobox 4G	Rattus norvegicus	ENSRNOG00000027994 (Ensembl)
HDRp978	NP_001020045	Rhox9	reproductive homeobox 9	Rattus norvegicus	ENSRNOG00000007526 (Ensembl)
HDRp1045	NP_001012129	Satb1	special AT-rich sequence binding protein 1	Rattus norvegicus	ENSRNOG00000012942 (Ensembl)
HDRp1003	NP_001102776	Satb2	special AT-rich sequence binding protein 2	Rattus norvegicus	ENSRNOG00000010188 (Ensembl)
HDRp1064	NP_076441	Sebox	SEBOX homeobox	Rattus norvegicus	Q9ERS8 (UniProt)
HDRp1028	NP_037160	Shox2	short stature homeobox 2	Rattus norvegicus	O35750 (UniProt)
HDRp992	XP_343080	Six1	sine oculis-related homeobox 1 homolog (Drosophila)	Rattus norvegicus	ENSRNOG00000022777 (Ensembl)
HDRp1046	XP_345631	Six2	sine oculis-related homeobox 2 homolog (Drosophila)	Rattus norvegicus	ENSRNOG00000024511 (Ensembl)
HDRp1067	NP_076480	Six3	sine oculis-related homeobox 3 homolog (Drosophila)	Rattus norvegicus	ENSRNOG00000024544 (Ensembl)
HDRp1020	NP_001100209	Six4	sine oculis-related homeobox 4 homolog (Drosophila)	Rattus norvegicus	ENSRNOG00000007250 (Ensembl)
HDRp1082	XP_218412	Six5	sine oculis-related homeobox 5 homolog (Drosophila)	Rattus norvegicus	ENSRNOG00000015349 (Ensembl)
HDRp903	NP_001101502	Six6	sine oculis-related homeobox 6 homolog (Drosophila)	Rattus norvegicus	ENSRNOG00000006296 (Ensembl)
HDRp450	NP_036801	Tcf1	HNF1 homeobox A	Rattus norvegicus	P15257 (UniProt)
HDRp996	NP_001015020	Tgif1	TG interacting factor 1	Rattus norvegicus	ENSRNOG00000015906 (Ensembl)
HDRp514	XP_216720	Titf1	NK2 homeobox 1	Rattus norvegicus	P23441 (UniProt)
HDRp962	NP_001102636	Tlx1	T-cell leukemia, homeobox 1	Rattus norvegicus	ENSRNOG00000016120 (Ensembl)
HDRp957	XP_573065	Tlx3	T-cell leukemia, homeobox 3	Rattus norvegicus	ENSRNOG00000004976 (Ensembl)
HDRp1007	XP_225688	Tshz1	teashirt zinc finger family member 1	Rattus norvegicus	ENSRNOG00000016246 (Ensembl)
HDRp918	NP_001100976	Tshz3	teashirt zinc finger family member 3	Rattus norvegicus	ENSRNOG00000013938 (Ensembl)
HDRp1060	NP_058875	Uncx	UNC homeobox	Rattus norvegicus	P97830 (UniProt)
HDRp998	NP_072158	Vax1	ventral anterior homeobox containing gene 1	Rattus norvegicus	Q9JM00 (UniProt)
HDRp935	NP_072159	Vax2	ventral anterior homeobox containing gene 2	Rattus norvegicus	Q9JLZ9 (UniProt)
HDRp1004	XP_345705	Vsx2	visual system homeobox 2	Rattus norvegicus	ENSRNOG00000011918 (Ensembl)
HDRp950	NP_037296	Zeb1	zinc finger E-box binding homeobox 1	Rattus norvegicus	Q62947 (UniProt)
HDRp1015	NP_001028873	Zeb2	zinc finger E-box binding homeobox 2	Rattus norvegicus	ENSRNOG00000004677 (Ensembl)
HDRp1014	XP_226464	Zfhx3	zinc finger homeobox 3	Rattus norvegicus	ENSRNOG00000014452 (Ensembl)
HDRp1043	XP_226964	Zfhx4	zinc finger homeodomain 4	Rattus norvegicus	ENSRNOG00000008765 (Ensembl)
HDRp982	NP_598304	Zhx1	zinc fingers and homeoboxes 1	Rattus norvegicus	Q8R515 (UniProt)
HDRp942	XP_235318	Zhx2	zinc fingers and homeoboxes 2	Rattus norvegicus	Q80VX4 (UniProt)
HDRp924	NP_001040562	Zhx3	zinc fingers and homeoboxes 3	Rattus norvegicus	Q80Z36 (UniProt)
HDRp1503	NP_015148	CUP9		Saccharomyces cerevisiae
HDRp1501	NP_009866	HMLALPHA2		Saccharomyces cerevisiae
HDRp539	NP_010021	HMRA1		Saccharomyces cerevisiae	P01366 (UniProt)
HDRp553	NP_010020	HMRA2		Saccharomyces cerevisiae	Q6B184 (UniProt)
HDRp540	NP_009868	MATALPHA2		Saccharomyces cerevisiae	Q6B2C0 (UniProt)
HDRp1504	NP_010177	PHO2		Saccharomyces cerevisiae
HDRp1502	NP_011419	TOS8		Saccharomyces cerevisiae
HDRp1507	NP_010739	YHP1		Saccharomyces cerevisiae
HDRp1505	NP_013685	YOX1		Saccharomyces cerevisiae
HDRp1574	XP_001587642	LOC5483475		Sclerotinia sclerotiorum
HDRp1568	XP_001589917	LOC5486034		Sclerotinia sclerotiorum
HDRp1575	XP_001594714	LOC5490521		Sclerotinia sclerotiorum
HDRp1571	XP_001594496	LOC5490568		Sclerotinia sclerotiorum
HDRp1570	XP_001596875	LOC5492695		Sclerotinia sclerotiorum
HDRp1572	XP_001597373	LOC5493286		Sclerotinia sclerotiorum
HDRp1573	XP_001597124	LOC5494047		Sclerotinia sclerotiorum
HDRp1569	XP_001598580	LOC5494458		Sclerotinia sclerotiorum
HDRp1875	XP_001033101	LOC4524299		Tetrahymena thermophila SB210
HDRp1889	XP_001302374	LOC4747115		Trichomonas vaginalis G3
HDRp1877	XP_001308042	LOC4752856		Trichomonas vaginalis G3
HDRp1878	XP_001312223	LOC4757099		Trichomonas vaginalis G3
HDRp1886	XP_001312547	LOC4757427		Trichomonas vaginalis G3
HDRp1887	XP_001313863	LOC4758755		Trichomonas vaginalis G3
HDRp1881	XP_001314554	LOC4760051		Trichomonas vaginalis G3
HDRp1882	XP_001321256	LOC4766947		Trichomonas vaginalis G3
HDRp1884	XP_001321710	LOC4767404		Trichomonas vaginalis G3
HDRp1888	XP_001324166	LOC4769902		Trichomonas vaginalis G3
HDRp1880	XP_001324816	LOC4770560		Trichomonas vaginalis G3
HDRp1885	XP_001324980	LOC4770725		Trichomonas vaginalis G3
HDRp1879	XP_001325762	LOC4771518		Trichomonas vaginalis G3
HDRp1876	XP_001327813	LOC4773593		Trichomonas vaginalis G3
HDRp1883	XP_001583961	LOC5468534		Trichomonas vaginalis G3
HDRp1915	XP_002107730	LOC6748945	hypothetical protein	Trichoplax adhaerens
HDRp1893	XP_002108627	LOC6749041	hypothetical protein	Trichoplax adhaerens
HDRp1919	XP_002107829	LOC6749044	hypothetical protein	Trichoplax adhaerens
HDRp1903	XP_002107830	LOC6749045	hypothetical protein	Trichoplax adhaerens
HDRp1909	XP_002107831	LOC6749046	hypothetical protein	Trichoplax adhaerens
HDRp1907	XP_002108628	LOC6749047	hypothetical protein	Trichoplax adhaerens
HDRp1892	XP_002109364	LOC6750579	hypothetical protein	Trichoplax adhaerens
HDRp1924	XP_002109974	LOC6750631	hypothetical protein	Trichoplax adhaerens
HDRp1922	XP_002109982	LOC6750643	hypothetical protein	Trichoplax adhaerens
HDRp1905	XP_002111792	LOC6752539	hypothetical protein	Trichoplax adhaerens
HDRp1896	XP_002111340	LOC6752553	hypothetical protein	Trichoplax adhaerens
HDRp1901	XP_002111342	LOC6752555	hypothetical protein	Trichoplax adhaerens
HDRp1923	XP_002111596	LOC6752809	IRX-TALE class homeobox protein	Trichoplax adhaerens
HDRp1913	XP_002112467	LOC6753680	hypothetical protein	Trichoplax adhaerens
HDRp1894	XP_002115186	LOC6756233	hypothetical protein	Trichoplax adhaerens
HDRp1908	XP_002114994	LOC6756384	hypothetical protein	Trichoplax adhaerens
HDRp1920	XP_002115271	LOC6756484	hypothetical protein	Trichoplax adhaerens
HDRp1914	XP_002115278	LOC6756623	hypothetical protein	Trichoplax adhaerens
HDRp1899	XP_002115927	LOC6757000	hypothetical protein	Trichoplax adhaerens
HDRp1902	XP_002115790	LOC6757003	hypothetical protein	Trichoplax adhaerens
HDRp1904	XP_002115704	LOC6757056	hypothetical protein	Trichoplax adhaerens
HDRp1891	XP_002116505	LOC6757623	hypothetical protein	Trichoplax adhaerens
HDRp1916	XP_002116415	LOC6757628	OTP-paired class homeobox protein	Trichoplax adhaerens
HDRp1918	XP_002116416	LOC6757629	HBN-paired class homeobox protein	Trichoplax adhaerens
HDRp1897	XP_002116571	LOC6757784	ANTP homeobox protein	Trichoplax adhaerens
HDRp1895	XP_002116572	LOC6757785	hypothetical protein	Trichoplax adhaerens
HDRp1898	XP_002116773	LOC6757918	hypothetical protein	Trichoplax adhaerens
HDRp1921	XP_002116775	LOC6757919	hypothetical protein	Trichoplax adhaerens
HDRp1890	XP_002116774	LOC6757986	hypothetical protein	Trichoplax adhaerens
HDRp1912	XP_002116705	LOC6757987	ANTP homeobox protein	Trichoplax adhaerens
HDRp1900	XP_002117377	LOC6758540	hypothetical protein	Trichoplax adhaerens
HDRp1911	XP_002117378	LOC6758590	hypothetical protein	Trichoplax adhaerens
HDRp1906	XP_002117397	LOC6758610	not homeobox transcription factor	Trichoplax adhaerens
HDRp1910	XP_002117963	LOC6759195	hypothetical protein	Trichoplax adhaerens
HDRp1917	XP_002118201	LOC6759395	trox-2 homeobox transcription factor	Trichoplax adhaerens
HDRp1582	XP_756428	LOC3628363		Ustilago maydis
HDRp1580	XP_756636	LOC3628531		Ustilago maydis
HDRp1576	XP_756724	LOC3628593		Ustilago maydis
HDRp1581	XP_756725	LOC3628594		Ustilago maydis
HDRp1579	XP_761075	LOC3633031		Ustilago maydis
HDRp1578	XP_761909	LOC3633894		Ustilago maydis
HDRp1577	XP_762430	LOC3634463		Ustilago maydis
HDRp533	NP_001084104	XMeis1-2 protein		Xenopus laevis	P79937 (UniProt)
HDRp524	NP_001083906			Xenopus laevis	Q8QGC4 (UniProt)
HDRp526	NP_001025566	TNeu022o06.1		Xenopus tropicalis	Q5BL47 (UniProt)

Homeodomain Resource

Homeodomain Proteins