Identify and map protein coding and non-protein coding transcribed sequences using microarrays, high-throughput sequencing and computational predictions.
Steven Henikoff
Fred Hutchinson Cancer Research Center
C. elegans / D. melanogaster
Identify sites of active chromatin by mapping core histone variants using a biotin-tagging system.
Gary Karpen
Lawrence Berkeley National Laboratory
D. melanogaster
Map and analyze chromosomal proteins and histone modifications using ChIP-chip.
Eric Lai
Memorial Sloan-Kettering Cancer Center
D. melanogaster
Characterize small RNAs using high-throughput sequencing.
Jason Lieb
University of North Carolina at Chapel Hill
C. elegans
Map and analyze chromosomal protein targets by ChIP-chip.
David MacAlpine
Duke University
D. melanogaster
Map origins of replication; determine replication timing; identify sites of pre-replicative complex formation using microarrays.
Fabio Piano
New York University
C. elegans
Identify microRNA binding elements in 3'UTRs using microarrays and high-throughput sequencing.
Michael Snyder
Yale University
C. elegans
Pilot effort to demonstrate feasibility of using a tagging strategy to map transcription factor binding sites by ChIP-chip
Robert Waterston
University of Washington
C. elegans
Identify and functionally classify protein coding and non-protein coding transcribed sequencing, primarily using computational methods.
Kevin White
University of Chicago
D. melanogaster
Map transcription factor binding sites using ChIP-chip.