Tutorials
Sequence quality control explains several common problems with sets of viral sequences How to make a phylogenetic tree explains how to build a phylogenetic tree HIV and SIV subtype nomenclature explains HIV and SIV subtype nomenclature, particularly HIV-1 groups and subtypes How to use these databases summaries of workshops given at conferences Articles
3D views of HIV macromolecular structures provides links to 3D views of HIV proteins Stalking the AIDS Virus [PDF] article from LANL Research Quarterly (Fall 2003) about HIV Database research on the HIV-immune system interaction as a step toward an AIDS vaccine |
Reference Information
Circulating recombinant forms (CRFs) gives details about all documented CRFs of HIV-1 HIV-1 gene map illustrates the genes/proteins of HIV-1, including HXB2 breakpoints Subtypes of primate immunodeficiency viruses overview of subtypes of HIV and SIV, particularly SIV subtypes How the HIV database classifies sequences explains how recombinants are named and annotated Common sequence formats for alignments shows examples of common sequence formats for alignments How to cite this Database explains how to cite this website and the printed HIV compendia Codes and symbols in sequences decodes the symbols and IUPAC codes that appear in sequences and alignments Codon table gives the translation of nucleotides into amino acids FAQs answers basic questions about the HIV Sequence Database Links HIV/AIDS resources and bioinformatics tools on other websites |