TreeRate beta
References: Please reference these articles when using TreeRate:
- Maljkovic Berry I, Ribeiro R, Kothari M, Athreya G, Daniels M, Lee HY, Bruno W, Leitner T. Unequal Evolutionary Rates in the Human Immunodeficiency Virus
Type 1 (HIV-1) Pandemic: the Evolutionary Rate of HIV-1 Slows Down When the Epidemic Rate Increases. 2007. J Virol 81:10625-10635.
- Athreya G, Maljkovic Berry I, Kothari M, Daniels M, Bruno W, Korber B, Kuiken C, Ribeiro R, Leitner T. A simple method for optimizing the root in phylogenetic trees with longitudinal data reveals an evolutionary rate that tracks the epidemiological dynamics of HIV-1. Manuscript submitted.
last modified: Mon Apr 13 14:30 2009