Detail |
Common Name |
DNA Binding Sequence |
Reference |
HDRb1 |
ALX4 |
TAAT(C/T)G(G/A)ATTA |
J. Biol. Chem. 274: 32325-32, 1999 |
HDRb2 |
ARIX |
GTCAATTAG |
J. Biol. Chem. 272: 27382-92, 1997 |
HDRb94 |
ATH1 |
TGACAGGT |
Biol. Chem. 387: 31-40, 2006 |
HDRb3 |
ATHB6 |
CAATTATTA |
EMBO J. 21: 3029-38, 2002 |
HDRb96 |
ATML1 |
GCATTAAATGC |
Plant Physiol. 141: 1363-75, 2006 |
HDRb4 |
BARX2 |
YYTAATGRTTTTY |
Gene 250: 171-80, 2000 |
HDRb5 |
CDX1 |
CTTTATG |
Cell 83: 641-53, 1995 |
HDRb6 |
CDX2 |
(A/C)TTTAT(A/G) |
Eur. J. Biochem. 236: 670-81, 1996 |
HDRb7 |
CDX4 |
TTTATA/T |
Development 125: 4349-58, 1999 |
HDRb101 |
CHX10 |
TAATTAGC |
Nat. Genet. 25: 397-401, 2000 |
HDRb8 |
CRT1 |
TAATNNNATTA |
Biochem. Biophys. Res. Commun. 250: 305-11, 1998 |
HDRb9 |
CRX |
TAATC(C/A) |
Cell 91: 531-41, 1997 |
HDRb10 |
CSX |
TNAAGTG |
Mol. Cell. Biol. 19: 526-36, 1999 |
HDRb11 |
DFD |
TTAATGG |
EMBO J. 10: 1179-86, 1991 |
HDRb12 |
DLX2 |
CACTAATTGAG |
Mech. Dev. 53: 87-96, 1996 |
HDRb14 |
DLX3 |
(A/C/G)TAATT(G/A)(C/G) |
Nucleic Acids Res. 27: 764-70, 1999 |
HDRb13 |
DLX3 |
CANTTATCTCAG |
J. Biol. Chem. 275: 15295-304, 2000 |
HDRb15 |
DLX4 |
TCAATTAATTGA |
Gene 187: 55-61, 1997 |
HDRb16 |
DLX5 |
ATAATTAG |
J. Neurosci. 20: 709-21, 2000 |
HDRb17 |
DLX6 |
ATAATTAG |
J. Neurosci. 20: 709-21, 2000 |
HDRb18 |
EMX2 |
CACTAATTGAG |
Mech. Dev. 53: 87-96, 1996 |
HDRb19 |
EVX1 |
TNATTANNNNNTAATNG |
J. Biol. Chem. 270: 27695-701, 1996 |
HDRb108 |
EXD-LAB |
TGATGGATTG |
Development 126: 5137-48, 1999 |
HDRb20 |
GBX2 |
TCACTCATTAACC |
Cell 91: 185-95, 1997 |
HDRb93 |
HAT3.1 |
T(A/G)(A/C)ACCA |
Biochemistry 46: 7416-25, 2007 |
HDRb21 |
HESX1 |
TGCAATTAAATTCCCAGGATTATCAT |
Development 128: 5189-99, 2001 |
HDRb22 |
HK31 |
TAAGTA |
Nucleic Acids Res. 28: 2389-95, 2000 |
HDRb23 |
HLX1 |
TCAATTAATTGA |
Gene 187: 55-61, 1997 |
HDRb24 |
HME1 |
TCGGTAATTACA |
J. Mol. Biol. 276: 529-36, 1998 |
HDRb25 |
HNF1 |
AGTTAATATTTGACA |
Mol. Cell. Biol. 16: 6273-84, 1996 |
HDRb27 |
HNF6 |
GATATTGATTTTT |
Mol. Cell. Biol. 16: 6273-84, 1996 |
HDRb99 |
HOX11 |
GGCGGTAAGTGG |
Nucleic Acids Res. 23: 1928-35, 1995 |
HDRb28 |
HOX11-PBX2-PREP1 |
TTCATTCAA |
Biochem. Biophys. Res. Commun. 294: 23-34, 2002 |
HDRb29 |
HOXA2 |
(T/A)GAT(T/G)GA(T/A)(G/C)(G/T/A) |
Biochem. Biophys. Res. Commun. 316: 898-902, 2004 |
HDRb103 |
HOXA9 |
CAATTTTATTAA |
Mol. Cell. Biol. 27: 4207-16, 2007 |
HDRb30 |
HOXC13 |
TT(A/T)ATN(A/G)(A/G) |
J. Biol. Chem. 277: 3718-26, 2002 |
HDRb95 |
HOXC8 |
TAATG |
J. Biomol. Struct. Dyn. 22: 707-18, 2005 |
HDRb31 |
HOXD13 |
TTAC |
Am. J. Hum. Genet. 72: 984-97, 2003 |
HDRb107 |
HTH |
CTGTCA |
Development 126: 5137-48, 1999 |
HDRb32 |
IPF1 |
CC(T/C)TAATGGG |
EMBO J. 12: 4251-9, 1993 |
HDRb33 |
ISL-1 |
GCGTAATATCTG |
J. Mol. Biol. 288: 689-703, 1999 |
HDRb34 |
ISL-2 |
(C/T)TAA(T/G)(G/T)(G/A) |
Biochemistry 33: 15149-58, 1995 |
HDRb100 |
LAB-EXD-HTH |
TGAT(C/A)ATTACAGCTGACT |
Development 132: 1591-600, 2005 |
HDRb36 |
LH2 |
CTAATTA |
Mol. Cell. Biol. 14: 2985-93, 1994 |
HDRb37 |
LHX3 |
TAATTAATTAA |
Gene 277: 239-50, 2001 |
HDRb38 |
MEI1 |
TGACAG(G/C)T |
Mol. Cell. Biol. 17: 5679-87, 1997 |
HDRb102 |
MIRROR |
AAAACACGTGTTAA |
Proc. Natl. Acad. Sci. U.S.A. 102: 14671-6, 2005 |
HDRb39 |
MOX2 |
TCAATTAATTGA |
Gene 187: 55-61, 1997 |
HDRb40 |
MSX-1 |
CTAATTG |
Development 121: 1433-42, 1995 |
HDRb41 |
MSX-2 |
TCAATTAATTGA |
Gene 187: 55-61, 1997 |
HDRb42 |
N-OCT5 |
ATGCAAAT |
Oncogene 14: 1287-94, 1997 |
HDRb98 |
NCX |
CGGTAATTGG |
FEBS Lett. 475: 170-4, 2000 |
HDRb43 |
NK61 |
TTAATTAC |
J. Biol. Chem. 275: 14743-51, 2000 |
HDRb44 |
NKX2.2 |
T(T/C)AAGT(A/G)(C/G)TT |
Proc. Natl. Acad. Sci. U.S.A. 97: 9443-8, 2000 |
HDRb104 |
NOBOX |
TAATTG |
J. Biol. Chem. 281: 35747-56, 2006 |
HDRb46 |
OCT1 |
AAATGCAAATACC |
J. Neurosci. 15: 4762-85, 1995 |
HDRb47 |
OCT2 |
ATGCAAAT |
J. Neurosci. 15: 4762-85, 1995 |
HDRb48 |
OCT3 |
ATGCAAAT |
Nucleic Acids Res. 20: 4613-20, 1992 |
HDRb49 |
OTX2 |
CCTAATCCTGGGTTATC |
FEBS Lett. 445: 160-4, 1999 |
HDRb50 |
PAX2 |
TCA(C/T)GC(G/A)TGAC |
Development 122: 627-35, 1996 |
HDRb51 |
PAX3 |
TAATNNATTA |
J. Biol. Chem. 272: 14175-82, 1997 |
HDRb52 |
PAX4 |
ANNN(C/T)CACCC |
Mol. Cell. Biol. 19: 8272-80, 2000 |
HDRb53 |
PAX5 |
(T/C)(G/C)GT(C/T)(A/C)CGCNNCANTGNN(C/T) |
Cell 80: 639-50, 1995 |
HDRb54 |
PAX6 |
ANNTTCACGC(A/T)T(G/C)ANT(G/T)(A/C)N(T/C) |
Cell 80: 639-50, 1995 |
HDRb55 |
PAX7 |
ATTAA |
Genomics 47: 187-99, 1998 |
HDRb56 |
PBX1 |
TTGATTGAT |
Mol. Cell. Biol. 14: 3938-48, 1994 |
HDRb57 |
PBX1-HOXA10 |
ATGATTTATGA |
Mol. Cell. Biol. 16: 1734-45, 1996 |
HDRb58 |
PBX1-HOXB1 |
ATGATTGATCG |
Cell 96: 587-97, 1999 |
HDRb59 |
PBX1-HOXB4 |
ATGATTGATGA |
Mol. Cell. Biol. 16: 1734-45, 1996 |
HDRb60 |
PBX1-HOXB6 |
ATGATTTATTA |
Mol. Cell. Biol. 16: 1734-45, 1996 |
HDRb61 |
PBX1-HOXB7 |
ATGATTTATGCTCTA |
Mol. Cell. Biol. 16: 1734-45, 1996 |
HDRb62 |
PBX1-HOXB8 |
ATGATTTATGACTCTA |
Mol. Cell. Biol. 17: 4696-706, 1997 |
HDRb63 |
PBX1-HOXC6 |
(A/G)TGATTTATTACTTT |
Mol. Cell. Biol. 17: 4696-706, 1997 |
HDRb64 |
PBX1-HOXC6 |
(A/G)TGATTTATTACTTT |
Mol. Cell. Biol. 17: 4696-706, 1997 |
HDRb65 |
PBX1-MEIS1 |
TGATTGACAG(G/C)T |
Mol. Cell. Biol. 17: 5679-87, 1997 |
HDRb66 |
PBX2 |
TTGATTGAT |
Mol. Cell. Biol. 14: 3938-48, 1994 |
HDRb67 |
PBX2-HOXC6 |
GTGATTTATTGCTTT |
Mol. Cell. Biol. 17: 4696-706, 1997 |
HDRb68 |
PBX3 |
TTGATTGAT |
Mol. Cell. Biol. 14: 3938-48, 1994 |
HDRb69 |
PBX3-HOXC6 |
GTGATTTATT(G/A)CTTT |
Mol. Cell. Biol. 17: 4696-706, 1997 |
HDRb70 |
PITX1 |
TAATCC |
Mol. Endocrinol. 12: 428-41, 1998 |
HDRb71 |
PITX2 |
TAATCC |
Mol. Cell. Biol. 19: 7001-10, 2000 |
HDRb72 |
PMX1 |
TAATA |
Mol. Cell. Biol. 17: 6653-62, 1997 |
HDRb73 |
PNX1 |
TGACAG |
EMBO J. 17: 1423-33, 1998 |
HDRb74 |
POU1F1 |
TAAAT |
Science 243: 814-7, 1989 |
HDRb75 |
POU2F1 |
ATGCAAAT |
Gene 122: 387-8, 1993 |
HDRb76 |
POU3F1 |
TGGAGANAATAGAG |
J. Biol. Chem. 275: 15295-304, 2000 |
HDRb77 |
POU3F2 |
ATGCAAAT |
Oncogene 14: 1287-94, 1997 |
HDRb78 |
POU3F4 |
ATGCAAAT |
Ann. Otol. Rhinol. Laryngol. 106: 320-5, 1997 |
HDRb79 |
POU4F1 |
(A/G)CTCATTAA(T/C) |
J. Neurosci. 15: 4762-85, 1995 |
HDRb80 |
POU4F2 |
(A/G)CTCATTAA(T/C) |
J. Neurosci. 15: 4762-85, 1995 |
HDRb81 |
POU4F3 |
(A/G)CTCATTAA(T/C) |
J. Neurosci. 15: 4762-85, 1995 |
HDRb82 |
POU5F1 |
ATGCAAAT |
Nucleic Acids Res. 20: 4613-20, 1992 |
HDRb105 |
PROS |
C(A/T)(C/T)NNC(T/C) |
Proc. Natl. Acad. Sci. U.S.A. 94: 10991-6, 1997 |
HDRb106 |
PROS |
(T)AAGACG |
Dev. Cell 4: 853-64, 2003 |
HDRb92 |
QUOX-1 |
CAATC |
Biochemistry Mosc. 70: 920-5, 2005 |
HDRb109 |
SCR-EXD |
AGATTAATCG |
Cell 131: 530-43, 2007 |
HDRb110 |
SCR-EXD |
TGATTTATGG |
Cell 131: 530-43, 2007 |
HDRb83 |
SIX2 |
TCGAGCCGGTGTCAGGTTGCTCC |
FEBS Lett. 393: 259-63, 1996 |
HDRb84 |
SIX3 |
NNNATTANNNN |
Development 129: 2835-49, 2002 |
HDRb85 |
SIX4 |
TCGAGCCGGTGTCAGGTTGCTCC |
FEBS Lett. 393: 259-63, 1996 |
HDRb86 |
SIX5 |
TCGAGCCGGTGTCAGGTTGCTCC |
FEBS Lett. 393: 259-63, 1996 |
HDRb97 |
SO |
GTAANYNGANAY(C/G) |
Development 132: 2771-82, 2005 |
HDRb87 |
TCF-1 |
AACAAAG |
Blood 86: 3050-9, 1995 |
HDRb88 |
TGIF |
TGACAA |
J. Biol. Chem. 270: 31178-88, 1996 |
HDRb89 |
TTF-1 |
TCAAGTGTT |
Eur. J. Biochem. 241: 101-13, 1996 |
HDRb90 |
UBX |
TTAATGGCC |
EMBO J. 11: 4059-72, 1992 |
HDRb91 |
vnd/NK-2 |
T(T/C)AAGTG(G/C) |
Proc. Natl. Acad. Sci. U.S.A. 99: 12721-6, 2002 |