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Genetic Structure of Auke Creek Pink Salmon

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Jerry Taylor
Auke Bay Laboratories
Alaska Fisheries Science Center, NOAA Fisheries

Ted Stevens Marine Research Institute
17109 Pt Lena Loop Rd
Juneau AK 99801
(907) 789-6040
Jerry.Taylor@noaa.gov

More than 20 years of studying the genetics of natural runs of pink salmon in Auke Creek has provided insight into the role of genetics in the success of anadromous populations. The studies are a result of a cooperative program between the University of Alaska Fairbanks (UAF) School of Fisheries and Ocean Sciences, (SFOS) and the National Marine Fisheries Service Auke Bay Laboratory. The program began in 1979 with a genetic marking project. Returning genetically-marked fish showed that Auke Creek pink salmon had strong genetic structure, which is related to return timing and which has persisted in subsequent generations. Moreover, population genetic studies of population structure in Auke Creek demonstrated significant effects of return timing on genetic frequencies in both even- and odd-year runs.

Subsequent heritability studies also demonstrated genetic influences on timing and, consequently, population structure.  Breeding studies that examined migration timing as a genetic trait showed that variation in timing of return had a basis in additive genetic variance.  Studies of development rate in early- and late-returning fish showed that development rates differed between the run segments in ways that can be generally explained as adaptation to environmental conditions.  In addition, analysis of family sizes of pink salmon returning to Auke Creek indicated a genetic effect on marine survival that is more accentuated in large returns than small returns. The implications are that a small portion of the population contributes disproportionately to the next generation, and, as a consequence of interannual environmental variation, the more successful portion varies unpredictably from generation to generation. Maintenance of genetic variation is a key to the long-term success of a population.  However, studies at Auke Creek with inter-brood year hybrids suggest that outbreeding depression may also occur.  Clearly the quality of the variation is important.

For more information on pink salmon genetics studies at Auke Creek, please contact Dr. A.J.Gharrett, UAF (ffajg@uaf.edu) or Dr. William Smoker, UAF (ffwws@uaf.edu).


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