"I was wondering if the Planet around 51Pegasi is really sutable for human life and if other planets are too."
-
A Supertree Analysis of the Metazoan Phylogeny
Project Investigators: Gayle Philip
Other Project Members
Eric Gaidos (Collaborator)Summary
Detailed knowledge of the phylogenetic relationships among the extant animal kingdom (Metazoa) and their eukaryotic relatives is critical for understanding the origin of complex life. Recently, the smallest known animal genome and the sole representative species of the phylum Placozoa was released. This genome, Trichoplax adhaerens, has allowed us to get insights into our understanding of how animal life evolved by addressing questions relating to the evolution of the basal metazoans.
Astrobiology Roadmap Objectives:
Project Progress
64 completed eukaryotic genomes were retrieved from the appropriate sequencing centers. Homologous sequences to every predicted Trichoplax adhaerens gene were identified using the BLASTP algorithm (Altschul et al, 1997). From the multiple BLASTP searches, gene families with more than one representative from any genome were discarded and those remaining families with a minimum of four sequences were selected for phylogenetic reconstruction. This conservative approach was used to minimize the inadvertent analysis of paralogs. The sequences were aligned and the optimal protein models of sequence substitution and estimated parameters for each gene family were calculated. According to the selected parameters, hypotheses of relationships were re-constructed using Maximum Likelihood to construct source trees. The supertree software CLANN was then used to find the D-fit supertree that best described the relationships from all the source trees. Currently we are running analyses to assess the support for the reconstructed phylogeny.
- HANDBOOK OF STAR FORMING REGIONS
- A Rare low mass quadruple spectroscopic AND eclipsing binary
- A search for Main Belt Comets in Pan-STARRS 1
- A search for primordial water from deep in the Earth's mantle
- A spectroscopically unique Main Belt asteroid: 10537 (1991 RY16)
- A Supertree Analysis of the Metazoan Phylogeny
- Acquisition and Installation of a new Cameca ims 1280 ion microprobe
- Acquisition and Installation of Witec Confocal Raman microscope scanning system
- Amorphization of Crystalline Water Ice in the Solar System
- Assessing the likelihood of supernova impact of protoplanetary disks
- Carbonate Lithologies on Devon Island, Canada
- Chemistry and biology of ultramafic-hosted alkaline springs
- Chemistry of the NH3/H2O system
- DIVERSITY AND BIOGEOGRAPHY OF THE UNIQUE TROPICAL PHYLUM PLACOZOA
- Dynamical Evolution of Astroid Belt and the Parent Bodies of Iron Meteorites
- Ecology of a Hawaiian lava cave microbial mat
- FMARS Long Duration Mission: a simulation of manned Mars exploration in an analogue environment, Devon Island, Canada
- Formation and Detection of Hot-Earth Objects in Systems with Close-in Jupiters
- Formation and the Prospects of the Detection of Habitable Planets in Extreme Planetary Systems
- Formation of Molecular Hydrogen via Interaction of Ionizing Radiation with Hydrocarbon Ices in the Interstellar Medium
- Formation of Planetesimals in a Dynamically Evolving Nebula
- FU ORIONIS ERUPTIONS
- Ice Ages on Mars
- Ice at the Mars Phoenix Landing Site
- Ice on Main Belt Comets
- Icelandic subglacial lakes
- Mechanisms of Marine Microbial Community Structuring
- Mechanistical Studies on the Non-Equilibrium Chemistry of Unusual Carbon Oxide in Solar System Ices
- Modeling grain surface reaction pathways for large organic molecules
- Molecular Deuteration on grain surfaces
- NEWBORN BINARIES
- Observations and Models of comet 17P/Holmes
- Origin and Activation Mechanism of Main Belt Comets
- Origin of Irregular Satellites
- Recovery of comet 85P/Boethin for the Deep Impact Extended Mission
- Sediment-buried basement deep biosphere
- Serpentinazation and abiogenic methane in the Mariana Forearc
- Sleeping through the Arctic Martian Sol
- Spectropolarimetric studies of stars with hot jupiters
- TES study of intracrater low albedo deposits, Amazonis Planitia, Mars
- The delivery of short-lived radionucleides to the solar system
- The effect of lunar-like satellites on the orbital infrared lightcurves of Earth-analog planets
- The Main Belt distribution of basaltic asteroids
- The Size Distribution of Small KBOs
- THE VYSOS PROJECT
- Ultra-violet processing of ices in the Rosette Nebula
- Unveiling the evolution and interplay of ice and gas in quiescent clouds
- Variable Young Stellar Objects Survey (VYSOS)
- Water on Mars
- X-ray- and UV-bright low-mass stars in the solar neighborhood